RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 TNNT2P45379 298 aaPredicted RBP3.67□□□□□ -1.82
HERC4-201ENST00000277817 ATP1A2P50993 1020 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 HIRAP54198 1017 aaPredicted RBP3.67□□□□□ -1.82
HERC4-201ENST00000277817 HLTFQ14527 1009 aaKnown RBP eCLIP3.67□□□□□ -1.822e-6■■■■□ 23.7
HERC4-201ENST00000277817 BRDTQ58F21 947 aaPredicted RBP3.67□□□□□ -1.82
HERC4-201ENST00000277817 PNMA1Q8ND90 353 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 C7orf43Q8WVR3 580 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 SLC4A9Q96Q91 983 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 RBM19Q9Y4C8 960 aaKnown RBP3.67□□□□□ -1.82
HERC4-201ENST00000277817 HRH3Q9Y5N1 445 aa3.67□□□□□ -1.82
HERC4-201ENST00000277817 PNPLA6Q8IY17 1366 aa3.66□□□□□ -1.82
HERC4-201ENST00000277817 ZBTB24O43167 697 aaPredicted RBP3.66□□□□□ -1.82
HERC4-201ENST00000277817 NR1I2O75469 434 aa3.66□□□□□ -1.82
HERC4-201ENST00000277817 MCL1Q07820 350 aa3.66□□□□□ -1.82
HERC4-201ENST00000277817 ALG1LQ6GMV1 187 aa3.66□□□□□ -1.82
HERC4-201ENST00000277817 PARD3Q8TEW0 1356 aa3.66□□□□□ -1.82
HERC4-201ENST00000277817 MZF1P28698 734 aaPredicted RBP3.66□□□□□ -1.82
HERC4-201ENST00000277817 PMLP29590 882 aa3.66□□□□□ -1.82
HERC4-201ENST00000277817 PLCB3Q01970 1234 aa3.66□□□□□ -1.82
HERC4-201ENST00000277817 UBR3Q6ZT12 1888 aa3.66□□□□□ -1.82
HERC4-201ENST00000277817 LTN1O94822 1766 aa3.66□□□□□ -1.82
HERC4-201ENST00000277817 GREM1O60565 184 aa3.66□□□□□ -1.82
HERC4-201ENST00000277817 TM4SF20Q53R12 229 aa3.66□□□□□ -1.82
HERC4-201ENST00000277817 PRPF38AQ8NAV1 312 aaKnown RBP3.66□□□□□ -1.82
HERC4-201ENST00000277817 L3MBTL2Q969R5 705 aa3.66□□□□□ -1.82
HERC4-201ENST00000277817 BCORQ6W2J9 1755 aa3.66□□□□□ -1.82
HERC4-201ENST00000277817 WASHC2CQ9Y4E1 1318 aa3.66□□□□□ -1.82
HERC4-201ENST00000277817 MPSTP25325 297 aa3.65□□□□□ -1.82
HERC4-201ENST00000277817 RASSF7Q02833 373 aa3.65□□□□□ -1.82
HERC4-201ENST00000277817 GOLGA2Q08379 1002 aa3.65□□□□□ -1.82
HERC4-201ENST00000277817 PAK2Q13177 524 aa3.65□□□□□ -1.82
HERC4-201ENST00000277817 SIM2Q14190 667 aaPredicted RBP3.65□□□□□ -1.82
HERC4-201ENST00000277817 TKFCQ3LXA3 575 aa3.65□□□□□ -1.82
HERC4-201ENST00000277817 NXNQ6DKJ4 435 aa3.65□□□□□ -1.82
HERC4-201ENST00000277817 KRBA2Q6ZNG9 492 aa3.65□□□□□ -1.82
HERC4-201ENST00000277817 PMFBP1Q8TBY8 1022 aa3.65□□□□□ -1.82
HERC4-201ENST00000277817 DHX57Q6P158 1386 aaKnown RBP3.65□□□□□ -1.82
HERC4-201ENST00000277817 A0A087X0B3 334 aa3.65□□□□□ -1.82
HERC4-201ENST00000277817 TSPAN6O43657 245 aa3.65□□□□□ -1.82
HERC4-201ENST00000277817 ETFBP38117 255 aa3.65□□□□□ -1.82
HERC4-201ENST00000277817 HTR3AP46098 478 aa3.65□□□□□ -1.82
HERC4-201ENST00000277817 SCNN1DP51172 638 aa3.65□□□□□ -1.82
HERC4-201ENST00000277817 ZNF526Q8TF50 670 aaPredicted RBP3.65□□□□□ -1.82
HERC4-201ENST00000277817 ZNF669Q96BR6 464 aaPredicted RBP3.65□□□□□ -1.82
HERC4-201ENST00000277817 STAC3Q96MF2 364 aa3.65□□□□□ -1.82
HERC4-201ENST00000277817 OSBPL7Q9BZF2 842 aa3.65□□□□□ -1.82
HERC4-201ENST00000277817 GIGYF1O75420 1035 aaPredicted RBP3.65□□□□□ -1.83
HERC4-201ENST00000277817 HOXB3P14651 431 aaPredicted RBP3.65□□□□□ -1.83
HERC4-201ENST00000277817 KRT72Q14CN4 511 aa3.65□□□□□ -1.83
HERC4-201ENST00000277817 FOXD4L6Q3SYB3 417 aaPredicted RBP3.65□□□□□ -1.83
HERC4-201ENST00000277817 CCDC102BQ68D86 513 aa3.65□□□□□ -1.83
HERC4-201ENST00000277817 GPR153Q6NV75 609 aa3.65□□□□□ -1.83
HERC4-201ENST00000277817 FOXD4L3Q6VB84 417 aaPredicted RBP3.65□□□□□ -1.83
HERC4-201ENST00000277817 SDR16C5Q8N3Y7 309 aa3.65□□□□□ -1.83
HERC4-201ENST00000277817 SH3TC2Q8TF17 1288 aa3.65□□□□□ -1.83
HERC4-201ENST00000277817 KHSRPQ92945 711 aaKnown RBP eCLIP3.65□□□□□ -1.831e-6■■■■□ 22
HERC4-201ENST00000277817 LRFN2Q9ULH4 789 aa3.65□□□□□ -1.83
HERC4-201ENST00000277817 PCDHGB7Q9Y5F8 929 aa3.65□□□□□ -1.83
HERC4-201ENST00000277817 KIF20BQ96Q89 1820 aa3.65□□□□□ -1.83
HERC4-201ENST00000277817 RGS3P49796 1198 aa3.65□□□□□ -1.83
HERC4-201ENST00000277817 COX20Q5RI15 118 aa3.65□□□□□ -1.83
HERC4-201ENST00000277817 EMID1Q96A84 441 aaPredicted RBP3.65□□□□□ -1.83
HERC4-201ENST00000277817 GPRASP2Q96D09 838 aa3.65□□□□□ -1.83
HERC4-201ENST00000277817 NOD1Q9Y239 953 aa3.65□□□□□ -1.83
HERC4-201ENST00000277817 SBNO1A3KN83 1393 aa3.65□□□□□ -1.83
HERC4-201ENST00000277817 N4BP2Q86UW6 1770 aaPredicted RBP3.64□□□□□ -1.83
HERC4-201ENST00000277817 ZBTB39O15060 712 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 MORC3Q14149 939 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 DHX8Q14562 1220 aaKnown RBP3.64□□□□□ -1.83
HERC4-201ENST00000277817 PTPRNQ16849 979 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 ZFYVE27Q5T4F4 411 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 TTC39BQ5VTQ0 682 aaPredicted RBP3.64□□□□□ -1.83
HERC4-201ENST00000277817 FAM43BQ6ZT52 329 aaPredicted RBP3.64□□□□□ -1.83
HERC4-201ENST00000277817 RNF180Q86T96 592 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 JAMLQ86YT9 394 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 GAS2L2Q8NHY3 880 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 FRAT1Q92837 279 aaPredicted RBP3.64□□□□□ -1.83
HERC4-201ENST00000277817 SOS2Q07890 1332 aaPredicted RBP3.64□□□□□ -1.83
HERC4-201ENST00000277817 PAK3O75914 559 aaPredicted RBP3.64□□□□□ -1.83
HERC4-201ENST00000277817 DNAJA1P31689 397 aaKnown RBP3.64□□□□□ -1.83
HERC4-201ENST00000277817 EIF1AXP47813 144 aaKnown RBP3.64□□□□□ -1.83
HERC4-201ENST00000277817 MTFR1Q15390 333 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 MAPRE1Q15691 268 aaKnown RBP3.64□□□□□ -1.83
HERC4-201ENST00000277817 SHDQ96IW2 340 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 C1QTNF2Q9BXJ5 285 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 SLC4A5Q9BY07 1137 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 INPP5FQ9Y2H2 1132 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 NAIPQ13075 1403 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 KIF3BO15066 747 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 KCNA6P17658 529 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 BRICD5Q6PL45 260 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 TPCN2Q8NHX9 752 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 TSR2Q969E8 191 aaKnown RBP3.64□□□□□ -1.83
HERC4-201ENST00000277817 RHOVQ96L33 236 aa3.64□□□□□ -1.83
HERC4-201ENST00000277817 BTAF1O14981 1849 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 GTF2IP78347 998 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 FUT2Q10981 343 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 C1orf53Q5VUE5 145 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 AFAP1L2Q8N4X5 818 aa3.63□□□□□ -1.83
HERC4-201ENST00000277817 CSRNP1Q96S65 589 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms