RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 NOL8Q76FK4 1167 aaKnown RBP26.36■■□□□ 1.81
CCDC7-201ENST00000277657 GNL3LQ9NVN8 582 aaKnown RBP26.36■■□□□ 1.81
CCDC7-201ENST00000277657 LIMCH1Q9UPQ0 1083 aa26.36■■□□□ 1.81
CCDC7-201ENST00000277657 CAVIN4Q5BKX8 364 aa26.35■■□□□ 1.81
CCDC7-201ENST00000277657 NLGN1Q8N2Q7 840 aa26.35■■□□□ 1.81
CCDC7-201ENST00000277657 FAM84BQ96KN1 310 aaPredicted RBP26.35■■□□□ 1.81
CCDC7-201ENST00000277657 ALDH8A1Q9H2A2 487 aaPredicted RBP26.35■■□□□ 1.81
CCDC7-201ENST00000277657 WWC3Q9ULE0 1092 aa26.35■■□□□ 1.81
CCDC7-201ENST00000277657 ZNF532Q9HCE3 1301 aa26.34■■□□□ 1.81
CCDC7-201ENST00000277657 BLOC1S2Q6QNY1 142 aa26.34■■□□□ 1.81
CCDC7-201ENST00000277657 FBXO33Q7Z6M2 555 aa26.34■■□□□ 1.81
CCDC7-201ENST00000277657 GPAA1O43292 621 aa26.34■■□□□ 1.81
CCDC7-201ENST00000277657 RPS6KB1P23443 525 aa26.34■■□□□ 1.81
CCDC7-201ENST00000277657 MAP3K12Q12852 859 aa26.34■■□□□ 1.81
CCDC7-201ENST00000277657 COL9A3Q14050 684 aaPredicted RBP26.34■■□□□ 1.81
CCDC7-201ENST00000277657 NRXN2Q9P2S2 1712 aa26.33■■□□□ 1.81
CCDC7-201ENST00000277657 KLRG2A4D1S0 409 aaPredicted RBP26.33■■□□□ 1.81
CCDC7-201ENST00000277657 RPGRQ92834 1020 aaKnown RBP26.32■■□□□ 1.8
CCDC7-201ENST00000277657 ZBTB22O15209 634 aa26.32■■□□□ 1.8
CCDC7-201ENST00000277657 NEK1Q96PY6 1258 aa26.32■■□□□ 1.8
CCDC7-201ENST00000277657 COL1A1P02452 1464 aaPredicted RBP26.32■■□□□ 1.8
CCDC7-201ENST00000277657 IRS2Q9Y4H2 1338 aa26.31■■□□□ 1.8
CCDC7-201ENST00000277657 HOXA10P31260 410 aaPredicted RBP26.31■■□□□ 1.8
CCDC7-201ENST00000277657 CTNNA3Q9UI47 895 aa26.31■■□□□ 1.8
CCDC7-201ENST00000277657 PNPLA7Q6ZV29 1317 aa26.3■■□□□ 1.8
CCDC7-201ENST00000277657 SEMA3EO15041 775 aa26.3■■□□□ 1.8
CCDC7-201ENST00000277657 KLRK1P26718 216 aa26.3■■□□□ 1.8
CCDC7-201ENST00000277657 NUCB2P80303 420 aa26.3■■□□□ 1.8
CCDC7-201ENST00000277657 STOX1Q6ZVD7 989 aa26.3■■□□□ 1.8
CCDC7-201ENST00000277657 VPS37DQ86XT2 251 aa26.3■■□□□ 1.8
CCDC7-201ENST00000277657 MAGEB6Q8N7X4 407 aa26.3■■□□□ 1.8
CCDC7-201ENST00000277657 TNPO1Q92973 898 aaKnown RBP26.3■■□□□ 1.8
CCDC7-201ENST00000277657 RBM17Q96I25 401 aaKnown RBP26.3■■□□□ 1.8
CCDC7-201ENST00000277657 ZSCAN31Q96LW9 406 aaPredicted RBP26.3■■□□□ 1.8
CCDC7-201ENST00000277657 DENND2AQ9ULE3 1009 aa26.3■■□□□ 1.8
CCDC7-201ENST00000277657 PDS5AQ29RF7 1337 aaKnown RBP26.29■■□□□ 1.8
CCDC7-201ENST00000277657 IQSEC3Q9UPP2 1182 aaPredicted RBP26.29■■□□□ 1.8
CCDC7-201ENST00000277657 FGAP02671 866 aa26.28■■□□□ 1.8
CCDC7-201ENST00000277657 ANKRD1Q15327 319 aa26.28■■□□□ 1.8
CCDC7-201ENST00000277657 SH2B1Q9NRF2 756 aaPredicted RBP26.28■■□□□ 1.8
CCDC7-201ENST00000277657 LEMD3Q9Y2U8 911 aa26.28■■□□□ 1.8
CCDC7-201ENST00000277657 ANKRD31Q8N7Z5 1873 aa26.28■■□□□ 1.8
CCDC7-201ENST00000277657 LAMA4Q16363 1823 aa26.28■■□□□ 1.8
CCDC7-201ENST00000277657 A0A0G2JLW4 131 aa26.27■■□□□ 1.8
CCDC7-201ENST00000277657 HMGB1P09429 215 aaKnown RBP26.27■■□□□ 1.8
CCDC7-201ENST00000277657 HIBADHP31937 336 aaKnown RBP26.27■■□□□ 1.8
CCDC7-201ENST00000277657 TTLL5Q6EMB2 1281 aa26.27■■□□□ 1.8
CCDC7-201ENST00000277657 CAMKK2Q96RR4 588 aa26.27■■□□□ 1.8
CCDC7-201ENST00000277657 CRAMP1Q96RY5 1269 aa26.27■■□□□ 1.8
CCDC7-201ENST00000277657 LARP6Q9BRS8 491 aaKnown RBP26.27■■□□□ 1.8
CCDC7-201ENST00000277657 XDHP47989 1333 aa26.27■■□□□ 1.8
CCDC7-201ENST00000277657 STRBPQ96SI9 672 aaKnown RBP26.26■■□□□ 1.79
CCDC7-201ENST00000277657 LRP2BPQ9P2M1 347 aa26.26■■□□□ 1.79
CCDC7-201ENST00000277657 E7EWF7 191 aa26.25■■□□□ 1.79
CCDC7-201ENST00000277657 BBOX1O75936 387 aa26.25■■□□□ 1.79
CCDC7-201ENST00000277657 LARGE1O95461 756 aa26.25■■□□□ 1.79
CCDC7-201ENST00000277657 TOB2Q14106 344 aaPredicted RBP26.25■■□□□ 1.79
CCDC7-201ENST00000277657 BRIP1Q9BX63 1249 aa26.25■■□□□ 1.79
CCDC7-201ENST00000277657 ANKIB1Q9P2G1 1089 aa26.25■■□□□ 1.79
CCDC7-201ENST00000277657 MYH13Q9UKX3 1938 aa26.25■■□□□ 1.79
CCDC7-201ENST00000277657 MCM4P33991 863 aa26.25■■□□□ 1.79
CCDC7-201ENST00000277657 IMMTQ16891 758 aaKnown RBP26.25■■□□□ 1.79
CCDC7-201ENST00000277657 AIDAQ96BJ3 306 aa26.25■■□□□ 1.79
CCDC7-201ENST00000277657 TPCN1Q9ULQ1 816 aa26.25■■□□□ 1.79
CCDC7-201ENST00000277657 CLEC17AQ6ZS10 378 aa26.24■■□□□ 1.79
CCDC7-201ENST00000277657 SLC51AQ86UW1 340 aa26.24■■□□□ 1.79
CCDC7-201ENST00000277657 TCEANC2Q96MN5 208 aa26.24■■□□□ 1.79
CCDC7-201ENST00000277657 ME3Q16798 604 aa26.23■■□□□ 1.79
CCDC7-201ENST00000277657 C15orf52Q6ZUT6 534 aaKnown RBP26.23■■□□□ 1.79
CCDC7-201ENST00000277657 TXNRD3Q86VQ6 643 aa26.23■■□□□ 1.79
CCDC7-201ENST00000277657 PKP1Q13835 747 aa26.23■■□□□ 1.79
CCDC7-201ENST00000277657 EZH2Q15910 746 aaKnown RBP26.23■■□□□ 1.79
CCDC7-201ENST00000277657 DHX32Q7L7V1 743 aaKnown RBP26.23■■□□□ 1.79
CCDC7-201ENST00000277657 CACNA1SQ13698 1873 aa26.23■■□□□ 1.79
CCDC7-201ENST00000277657 MMP10P09238 476 aa26.22■■□□□ 1.79
CCDC7-201ENST00000277657 ALX1Q15699 326 aa26.22■■□□□ 1.79
CCDC7-201ENST00000277657 ABCF2Q9UG63 623 aa26.22■■□□□ 1.79
CCDC7-201ENST00000277657 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.22■■□□□ 1.79
CCDC7-201ENST00000277657 ZMYM6O95789 1325 aa26.22■■□□□ 1.79
CCDC7-201ENST00000277657 LRRC37AA6NMS7 1700 aa26.22■■□□□ 1.79
CCDC7-201ENST00000277657 MBD4O95243 580 aa26.21■■□□□ 1.79
CCDC7-201ENST00000277657 EXOSC10Q01780 885 aaKnown RBP26.21■■□□□ 1.79
CCDC7-201ENST00000277657 EN1Q05925 392 aaPredicted RBP26.21■■□□□ 1.79
CCDC7-201ENST00000277657 ANO8Q9HCE9 1232 aaPredicted RBP26.21■■□□□ 1.79
CCDC7-201ENST00000277657 GPSM2P81274 684 aa26.21■■□□□ 1.79
CCDC7-201ENST00000277657 ZDHHC9Q9Y397 364 aa26.21■■□□□ 1.79
CCDC7-201ENST00000277657 QSER1Q2KHR3 1735 aa26.2■■□□□ 1.78
CCDC7-201ENST00000277657 ST3GAL1Q11201 340 aa26.2■■□□□ 1.78
CCDC7-201ENST00000277657 SLC15A2Q16348 729 aa26.2■■□□□ 1.78
CCDC7-201ENST00000277657 TMC4Q7Z404 712 aa26.2■■□□□ 1.78
CCDC7-201ENST00000277657 GBP4Q96PP9 640 aa26.2■■□□□ 1.78
CCDC7-201ENST00000277657 PARP3Q9Y6F1 533 aa26.2■■□□□ 1.78
CCDC7-201ENST00000277657 PATL2C9JE40 543 aaKnown RBP26.19■■□□□ 1.78
CCDC7-201ENST00000277657 ZNF213O14771 459 aa26.19■■□□□ 1.78
CCDC7-201ENST00000277657 Q6ZUG5 572 aa26.19■■□□□ 1.78
CCDC7-201ENST00000277657 PODXL2Q9NZ53 605 aa26.19■■□□□ 1.78
CCDC7-201ENST00000277657 RAI14Q9P0K7 980 aa26.19■■□□□ 1.78
CCDC7-201ENST00000277657 CYP7A1P22680 504 aa26.19■■□□□ 1.78
CCDC7-201ENST00000277657 HAND2P61296 217 aa26.19■■□□□ 1.78
CCDC7-201ENST00000277657 AGXT2Q9BYV1 514 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms