RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 CUL4AQ13619 759 aa24.54■■□□□ 1.52
LYSMD2-201ENST00000267838 CYP21A2P08686 494 aa24.54■■□□□ 1.52
LYSMD2-201ENST00000267838 CWC22Q9HCG8 908 aaKnown RBP24.54■■□□□ 1.52
LYSMD2-201ENST00000267838 WWC3Q9ULE0 1092 aa24.54■■□□□ 1.52
LYSMD2-201ENST00000267838 ZNF532Q9HCE3 1301 aa24.53■■□□□ 1.52
LYSMD2-201ENST00000267838 MAP3K12Q12852 859 aa24.53■■□□□ 1.52
LYSMD2-201ENST00000267838 FAM84BQ96KN1 310 aaPredicted RBP24.53■■□□□ 1.52
LYSMD2-201ENST00000267838 GPAA1O43292 621 aa24.52■■□□□ 1.52
LYSMD2-201ENST00000267838 BLOC1S2Q6QNY1 142 aa24.52■■□□□ 1.52
LYSMD2-201ENST00000267838 VPS37DQ86XT2 251 aa24.52■■□□□ 1.52
LYSMD2-201ENST00000267838 RBM17Q96I25 401 aaKnown RBP24.52■■□□□ 1.52
LYSMD2-201ENST00000267838 PNPLA7Q6ZV29 1317 aa24.52■■□□□ 1.52
LYSMD2-201ENST00000267838 TCRBV5S4A2TA0A5A2 114 aa24.52■■□□□ 1.52
LYSMD2-201ENST00000267838 FBXO33Q7Z6M2 555 aa24.52■■□□□ 1.52
LYSMD2-201ENST00000267838 ZGPATQ8N5A5 531 aaKnown RBP24.52■■□□□ 1.52
LYSMD2-201ENST00000267838 IQSEC3Q9UPP2 1182 aaPredicted RBP24.52■■□□□ 1.52
LYSMD2-201ENST00000267838 LIMCH1Q9UPQ0 1083 aa24.52■■□□□ 1.52
LYSMD2-201ENST00000267838 NRXN2Q9P2S2 1712 aa24.51■■□□□ 1.51
LYSMD2-201ENST00000267838 DDX11L8A8MPP1 907 aa24.5■■□□□ 1.51
LYSMD2-201ENST00000267838 RPS6KB1P23443 525 aa24.5■■□□□ 1.51
LYSMD2-201ENST00000267838 KLRK1P26718 216 aa24.5■■□□□ 1.51
LYSMD2-201ENST00000267838 INTS4Q96HW7 963 aaKnown RBP24.5■■□□□ 1.51
LYSMD2-201ENST00000267838 KLRG2A4D1S0 409 aaPredicted RBP24.49■■□□□ 1.51
LYSMD2-201ENST00000267838 FOXP2O15409 715 aa24.49■■□□□ 1.51
LYSMD2-201ENST00000267838 RAB3GAP1Q15042 981 aa24.49■■□□□ 1.51
LYSMD2-201ENST00000267838 MAGEB6Q8N7X4 407 aa24.49■■□□□ 1.51
LYSMD2-201ENST00000267838 RTN4Q9NQC3 1192 aaKnown RBP24.49■■□□□ 1.51
LYSMD2-201ENST00000267838 DENND2AQ9ULE3 1009 aa24.49■■□□□ 1.51
LYSMD2-201ENST00000267838 COL1A1P02452 1464 aaPredicted RBP24.49■■□□□ 1.51
LYSMD2-201ENST00000267838 NEK1Q96PY6 1258 aa24.49■■□□□ 1.51
LYSMD2-201ENST00000267838 CTNNA3Q9UI47 895 aa24.49■■□□□ 1.51
LYSMD2-201ENST00000267838 SEMA3EO15041 775 aa24.48■■□□□ 1.51
LYSMD2-201ENST00000267838 HOXA10P31260 410 aaPredicted RBP24.48■■□□□ 1.51
LYSMD2-201ENST00000267838 COL9A3Q14050 684 aaPredicted RBP24.48■■□□□ 1.51
LYSMD2-201ENST00000267838 EZH2Q15910 746 aaKnown RBP24.48■■□□□ 1.51
LYSMD2-201ENST00000267838 CAMKK2Q96RR4 588 aa24.48■■□□□ 1.51
LYSMD2-201ENST00000267838 ALDH8A1Q9H2A2 487 aaPredicted RBP24.48■■□□□ 1.51
LYSMD2-201ENST00000267838 ANKIB1Q9P2G1 1089 aa24.48■■□□□ 1.51
LYSMD2-201ENST00000267838 LEMD3Q9Y2U8 911 aa24.48■■□□□ 1.51
LYSMD2-201ENST00000267838 ANKRD31Q8N7Z5 1873 aa24.48■■□□□ 1.51
LYSMD2-201ENST00000267838 HIBADHP31937 336 aaKnown RBP24.47■■□□□ 1.51
LYSMD2-201ENST00000267838 EN1Q05925 392 aaPredicted RBP24.47■■□□□ 1.51
LYSMD2-201ENST00000267838 LRP2BPQ9P2M1 347 aa24.47■■□□□ 1.51
LYSMD2-201ENST00000267838 XDHP47989 1333 aa24.47■■□□□ 1.51
LYSMD2-201ENST00000267838 MYH13Q9UKX3 1938 aa24.47■■□□□ 1.51
LYSMD2-201ENST00000267838 LARP6Q9BRS8 491 aaKnown RBP24.47■■□□□ 1.51
LYSMD2-201ENST00000267838 IRS2Q9Y4H2 1338 aa24.46■■□□□ 1.51
LYSMD2-201ENST00000267838 TTLL5Q6EMB2 1281 aa24.46■■□□□ 1.51
LYSMD2-201ENST00000267838 STOX1Q6ZVD7 989 aa24.46■■□□□ 1.51
LYSMD2-201ENST00000267838 ZSCAN31Q96LW9 406 aaPredicted RBP24.46■■□□□ 1.51
LYSMD2-201ENST00000267838 CRAMP1Q96RY5 1269 aa24.46■■□□□ 1.51
LYSMD2-201ENST00000267838 LAMA4Q16363 1823 aa24.45■■□□□ 1.51
LYSMD2-201ENST00000267838 A0A0G2JLW4 131 aa24.45■■□□□ 1.5
LYSMD2-201ENST00000267838 BBOX1O75936 387 aa24.45■■□□□ 1.5
LYSMD2-201ENST00000267838 FGAP02671 866 aa24.45■■□□□ 1.5
LYSMD2-201ENST00000267838 PTMSP20962 102 aa24.45■■□□□ 1.5
LYSMD2-201ENST00000267838 ANKRD1Q15327 319 aa24.45■■□□□ 1.5
LYSMD2-201ENST00000267838 SLC51AQ86UW1 340 aa24.45■■□□□ 1.5
LYSMD2-201ENST00000267838 FAM43AQ8N2R8 423 aa24.45■■□□□ 1.5
LYSMD2-201ENST00000267838 AIDAQ96BJ3 306 aa24.45■■□□□ 1.5
LYSMD2-201ENST00000267838 BRIP1Q9BX63 1249 aa24.45■■□□□ 1.5
LYSMD2-201ENST00000267838 PDS5AQ29RF7 1337 aaKnown RBP24.45■■□□□ 1.5
LYSMD2-201ENST00000267838 MMP10P09238 476 aa24.44■■□□□ 1.5
LYSMD2-201ENST00000267838 NUCB2P80303 420 aa24.44■■□□□ 1.5
LYSMD2-201ENST00000267838 TNPO1Q92973 898 aaKnown RBP24.44■■□□□ 1.5
LYSMD2-201ENST00000267838 ABCF2Q9UG63 623 aa24.44■■□□□ 1.5
LYSMD2-201ENST00000267838 PARP3Q9Y6F1 533 aa24.44■■□□□ 1.5
LYSMD2-201ENST00000267838 HMGB1P09429 215 aaKnown RBP24.44■■□□□ 1.5
LYSMD2-201ENST00000267838 SLC15A2Q16348 729 aa24.44■■□□□ 1.5
LYSMD2-201ENST00000267838 IMMTQ16891 758 aaKnown RBP24.44■■□□□ 1.5
LYSMD2-201ENST00000267838 TXNRD3Q86VQ6 643 aa24.44■■□□□ 1.5
LYSMD2-201ENST00000267838 TCEANC2Q96MN5 208 aa24.44■■□□□ 1.5
LYSMD2-201ENST00000267838 STRBPQ96SI9 672 aaKnown RBP24.44■■□□□ 1.5
LYSMD2-201ENST00000267838 ANO8Q9HCE9 1232 aaPredicted RBP24.44■■□□□ 1.5
LYSMD2-201ENST00000267838 SH2B1Q9NRF2 756 aaPredicted RBP24.44■■□□□ 1.5
LYSMD2-201ENST00000267838 E7EWF7 191 aa24.43■■□□□ 1.5
LYSMD2-201ENST00000267838 ZBTB22O15209 634 aa24.43■■□□□ 1.5
LYSMD2-201ENST00000267838 GPSM2P81274 684 aa24.43■■□□□ 1.5
LYSMD2-201ENST00000267838 LARGE1O95461 756 aa24.42■■□□□ 1.5
LYSMD2-201ENST00000267838 RAI14Q9P0K7 980 aa24.42■■□□□ 1.5
LYSMD2-201ENST00000267838 GOLGA6L3A6NEY3 463 aa24.42■■□□□ 1.5
LYSMD2-201ENST00000267838 MBD4O95243 580 aa24.42■■□□□ 1.5
LYSMD2-201ENST00000267838 TOB2Q14106 344 aaPredicted RBP24.42■■□□□ 1.5
LYSMD2-201ENST00000267838 MSL1Q68DK7 614 aa24.42■■□□□ 1.5
LYSMD2-201ENST00000267838 STK32BQ9NY57 414 aa24.42■■□□□ 1.5
LYSMD2-201ENST00000267838 TPCN1Q9ULQ1 816 aa24.42■■□□□ 1.5
LYSMD2-201ENST00000267838 QSER1Q2KHR3 1735 aa24.41■■□□□ 1.5
LYSMD2-201ENST00000267838 LRRC37AA6NMS7 1700 aa24.4■■□□□ 1.5
LYSMD2-201ENST00000267838 TRAK2O60296 914 aa24.4■■□□□ 1.5
LYSMD2-201ENST00000267838 CYP7A1P22680 504 aa24.4■■□□□ 1.5
LYSMD2-201ENST00000267838 ME3Q16798 604 aa24.4■■□□□ 1.5
LYSMD2-201ENST00000267838 C15orf52Q6ZUT6 534 aaKnown RBP24.4■■□□□ 1.5
LYSMD2-201ENST00000267838 DHX32Q7L7V1 743 aaKnown RBP24.4■■□□□ 1.5
LYSMD2-201ENST00000267838 TMC4Q7Z404 712 aa24.4■■□□□ 1.5
LYSMD2-201ENST00000267838 GBP4Q96PP9 640 aa24.4■■□□□ 1.5
LYSMD2-201ENST00000267838 ISY1Q9ULR0 285 aaKnown RBP24.4■■□□□ 1.5
LYSMD2-201ENST00000267838 NSFL1CQ9UNZ2 370 aaKnown RBP24.4■■□□□ 1.5
LYSMD2-201ENST00000267838 FSD2A1L4K1 749 aa24.39■■□□□ 1.5
LYSMD2-201ENST00000267838 APPP05067 770 aa24.39■■□□□ 1.5
LYSMD2-201ENST00000267838 ATP2B4P23634 1241 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms