RNA–Protein interactions for RNA: ENST00000265956.8

GAPVD1-201, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-201ENST00000265956 ORC3Q9UBD5 711 aaPredicted RBP8.8□□□□□ -1
GAPVD1-201ENST00000265956 KIF3AQ9Y496 699 aa8.8□□□□□ -1
GAPVD1-201ENST00000265956 GPAA1O43292 621 aa8.79□□□□□ -1
GAPVD1-201ENST00000265956 MARCKSP29966 332 aaPredicted RBP8.79□□□□□ -1
GAPVD1-201ENST00000265956 CHAF1AQ13111 956 aaPredicted RBP8.79□□□□□ -1
GAPVD1-201ENST00000265956 SNW1Q13573 536 aaKnown RBP8.79□□□□□ -1
GAPVD1-201ENST00000265956 NAA16Q6N069 864 aaPredicted RBP8.79□□□□□ -1
GAPVD1-201ENST00000265956 ZNF396Q96N95 335 aaPredicted RBP8.79□□□□□ -1
GAPVD1-201ENST00000265956 GPR108Q9NPR9 543 aa8.79□□□□□ -1
GAPVD1-201ENST00000265956 RCOR1Q9UKL0 485 aa8.79□□□□□ -1
GAPVD1-201ENST00000265956 PCDHA7Q9UN72 937 aa8.79□□□□□ -1
GAPVD1-201ENST00000265956 AKAP2Q9Y2D5 859 aa8.79□□□□□ -1
GAPVD1-201ENST00000265956 RIOK3O14730 519 aaKnown RBP8.79□□□□□ -1
GAPVD1-201ENST00000265956 MCAMP43121 646 aa8.79□□□□□ -1
GAPVD1-201ENST00000265956 STK38Q15208 465 aa8.79□□□□□ -1
GAPVD1-201ENST00000265956 ZSCAN25Q6NSZ9 544 aa8.79□□□□□ -1
GAPVD1-201ENST00000265956 CACTINQ8WUQ7 758 aaKnown RBP8.79□□□□□ -1
GAPVD1-201ENST00000265956 MYL10Q9BUA6 226 aa8.79□□□□□ -1
GAPVD1-201ENST00000265956 SPTLC3Q9NUV7 552 aa8.79□□□□□ -1
GAPVD1-201ENST00000265956 TRMT112Q9UI30 125 aaKnown RBP8.79□□□□□ -1
GAPVD1-201ENST00000265956 KIF1AQ12756 1690 aa8.79□□□□□ -1
GAPVD1-201ENST00000265956 COL18A1P39060 1754 aa8.79□□□□□ -1
GAPVD1-201ENST00000265956 CIAO1O76071 339 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 NDUFA8P51970 172 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 AOPEPQ8N6M6 819 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 PHKBQ93100 1093 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 ZNF274Q96GC6 653 aaPredicted RBP8.78□□□□□ -1
GAPVD1-201ENST00000265956 ISCA1Q9BUE6 129 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 SENP2Q9HC62 589 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 SLAIN2Q9P270 581 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 CTNNA3Q9UI47 895 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 ADAMTSL3P82987 1691 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 UBE2Q2LH0YL09 131 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 ANTXR2P58335 489 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 FAM160A1Q05DH4 1040 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 ZRSR1Q15695 479 aaKnown RBP8.78□□□□□ -1
GAPVD1-201ENST00000265956 RBM43Q6ZSC3 357 aaKnown RBP8.78□□□□□ -1
GAPVD1-201ENST00000265956 MICU3Q86XE3 530 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 PLA2G4DQ86XP0 818 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 CCDC82Q8N4S0 544 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 ZBTB38Q8NAP3 1195 aaPredicted RBP8.78□□□□□ -1
GAPVD1-201ENST00000265956 TDRD7Q8NHU6 1098 aaKnown RBP8.78□□□□□ -1
GAPVD1-201ENST00000265956 PRIMPOLQ96LW4 560 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 RFX7Q2KHR2 1363 aa8.78□□□□□ -1
GAPVD1-201ENST00000265956 KIF28PB7ZC32 967 aa8.77□□□□□ -1
GAPVD1-201ENST00000265956 STARD3NLO95772 234 aa8.77□□□□□ -1
GAPVD1-201ENST00000265956 TRDNQ13061 729 aa8.77□□□□□ -1
GAPVD1-201ENST00000265956 GNL2Q13823 731 aaKnown RBP8.77□□□□□ -1
GAPVD1-201ENST00000265956 IQCB1Q15051 598 aa8.77□□□□□ -1
GAPVD1-201ENST00000265956 STX1AQ16623 288 aa8.77□□□□□ -1
GAPVD1-201ENST00000265956 TPD52L1Q16890 204 aaPredicted RBP8.77□□□□□ -1
GAPVD1-201ENST00000265956 ZNF710Q8N1W2 664 aa8.77□□□□□ -1
GAPVD1-201ENST00000265956 NCOA7Q8NI08 942 aa8.77□□□□□ -1
GAPVD1-201ENST00000265956 APPBP2Q92624 585 aa8.77□□□□□ -1
GAPVD1-201ENST00000265956 PRDM10Q9NQV6 1147 aa8.77□□□□□ -1
GAPVD1-201ENST00000265956 TOMM22Q9NS69 142 aa8.77□□□□□ -1
GAPVD1-201ENST00000265956 ATG3Q9NT62 314 aa8.77□□□□□ -1
GAPVD1-201ENST00000265956 TRMT1Q9NXH9 659 aaKnown RBP8.77□□□□□ -1
GAPVD1-201ENST00000265956 LAMA4Q16363 1823 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 B4E1Z4 1266 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 IRS4O14654 1257 aaPredicted RBP8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 TPM3P06753 285 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 PHKA1P46020 1223 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 SYNE3Q6ZMZ3 975 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 NFXL1Q6ZNB6 911 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 TTLL11Q8NHH1 800 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 MRPS27Q92552 414 aaKnown RBP8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 CARD10Q9BWT7 1032 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 AGXT2Q9BYV1 514 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 ZMYND15Q9H091 742 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 PIH1D3Q9NQM4 214 aaKnown RBP8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 BTG4Q9NY30 223 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 HPS5Q9UPZ3 1129 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 SALL1Q9NSC2 1324 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 CPDO75976 1380 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 PCCAP05165 728 aaPredicted RBP8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 LRRFIP1Q32MZ4 808 aaKnown RBP8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 RRP12Q5JTH9 1297 aaKnown RBP8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 CYB5R4Q7L1T6 521 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 ENGASEQ8NFI3 743 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 BCL2L12Q9HB09 334 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 ZBTB1Q9Y2K1 713 aa8.77□□□□□ -1.01
GAPVD1-201ENST00000265956 ANKRD18BA2A2Z9 1011 aa8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 TNNT1P13805 278 aa8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 NAA30Q147X3 362 aaPredicted RBP8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 PTPN21Q16825 1174 aa8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 DPCR1Q3MIW9 517 aa8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 NLRP10Q86W26 655 aa8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 TBC1D10CQ8IV04 446 aa8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 MB21D2Q8IYB1 491 aaPredicted RBP8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 LINC00301Q8NCQ3 95 aa8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 FBXO18Q8NFZ0 1043 aa8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 ZKSCAN3Q9BRR0 538 aa8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.76□□□□□ -1.016e-7■■■■□ 22.5
GAPVD1-201ENST00000265956 WWC3Q9ULE0 1092 aa8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 IQSEC3Q9UPP2 1182 aaPredicted RBP8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 RIPOR2Q9Y4F9 1068 aa8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 ZNF532Q9HCE3 1301 aa8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 STRCP1A6NGW2 1772 aa8.76□□□□□ -1.01
GAPVD1-201ENST00000265956 USP27XA6NNY8 438 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms