RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 GAS2L2Q8NHY3 880 aa8.82□□□□□ -1
SMARCE1-201ENST00000264640 ATP6V0A2Q9Y487 856 aa8.82□□□□□ -1
SMARCE1-201ENST00000264640 DLL1O00548 723 aa8.81□□□□□ -1
SMARCE1-201ENST00000264640 IPO8O15397 1037 aaKnown RBP8.81□□□□□ -1
SMARCE1-201ENST00000264640 PTPREP23469 700 aa8.81□□□□□ -1
SMARCE1-201ENST00000264640 KIAA2012Q0VF49 1180 aa8.81□□□□□ -1
SMARCE1-201ENST00000264640 FBXO46Q6PJ61 603 aaPredicted RBP8.81□□□□□ -1
SMARCE1-201ENST00000264640 TTLL7Q6ZT98 887 aa8.81□□□□□ -1
SMARCE1-201ENST00000264640 SUPT20HQ8NEM7 779 aa8.81□□□□□ -1
SMARCE1-201ENST00000264640 ZNF428Q96B54 188 aa8.81□□□□□ -1
SMARCE1-201ENST00000264640 DCPSQ96C86 337 aaKnown RBP8.81□□□□□ -1
SMARCE1-201ENST00000264640 CDCA5Q96FF9 252 aa8.81□□□□□ -1
SMARCE1-201ENST00000264640 ZBED2Q9BTP6 218 aa8.81□□□□□ -1
SMARCE1-201ENST00000264640 TMX4Q9H1E5 349 aaPredicted RBP8.81□□□□□ -1
SMARCE1-201ENST00000264640 ZBTB3Q9H5J0 574 aa8.81□□□□□ -1
SMARCE1-201ENST00000264640 UPF2Q9HAU5 1272 aaKnown RBP8.81□□□□□ -1
SMARCE1-201ENST00000264640 GGA3Q9NZ52 723 aa8.81□□□□□ -1
SMARCE1-201ENST00000264640 PSME4Q14997 1843 aa8.81□□□□□ -1
SMARCE1-201ENST00000264640 COL4A1P02462 1669 aa8.81□□□□□ -1
SMARCE1-201ENST00000264640 CUL9Q8IWT3 2517 aa8.8□□□□□ -1
SMARCE1-201ENST00000264640 PSMD14O00487 310 aa8.8□□□□□ -1
SMARCE1-201ENST00000264640 NTSR2O95665 410 aa8.8□□□□□ -1
SMARCE1-201ENST00000264640 PTPN5P54829 565 aa8.8□□□□□ -1
SMARCE1-201ENST00000264640 ZKSCAN2Q63HK3 967 aa8.8□□□□□ -1
SMARCE1-201ENST00000264640 MOB2Q70IA6 237 aa8.8□□□□□ -1
SMARCE1-201ENST00000264640 MCM10Q7L590 875 aa8.8□□□□□ -1
SMARCE1-201ENST00000264640 FTSJ3Q8IY81 847 aaKnown RBP8.8□□□□□ -1
SMARCE1-201ENST00000264640 MPNDQ8N594 471 aa8.8□□□□□ -1
SMARCE1-201ENST00000264640 FRAT1Q92837 279 aaPredicted RBP8.8□□□□□ -1
SMARCE1-201ENST00000264640 RTFDC1Q9BY42 306 aaPredicted RBP8.8□□□□□ -1
SMARCE1-201ENST00000264640 DBNDD1Q9H9R9 158 aa8.8□□□□□ -1
SMARCE1-201ENST00000264640 IBTKQ9P2D0 1353 aaPredicted RBP8.8□□□□□ -1
SMARCE1-201ENST00000264640 MAP3K15Q6ZN16 1313 aa8.8□□□□□ -1
SMARCE1-201ENST00000264640 GPR25O00155 361 aa8.79□□□□□ -1
SMARCE1-201ENST00000264640 RGS20O76081 388 aa8.79□□□□□ -1
SMARCE1-201ENST00000264640 TMPOP42166 694 aaKnown RBP8.79□□□□□ -1
SMARCE1-201ENST00000264640 LMOD3Q0VAK6 560 aa8.79□□□□□ -1
SMARCE1-201ENST00000264640 BECN1Q14457 450 aa8.79□□□□□ -1
SMARCE1-201ENST00000264640 KIF4BQ2VIQ3 1234 aa8.79□□□□□ -1
SMARCE1-201ENST00000264640 THSD4Q6ZMP0 1018 aa8.79□□□□□ -1
SMARCE1-201ENST00000264640 KIF6Q6ZMV9 814 aa8.79□□□□□ -1
SMARCE1-201ENST00000264640 SULF1Q8IWU6 871 aa8.79□□□□□ -1
SMARCE1-201ENST00000264640 PHACTR3Q96KR7 559 aa8.79□□□□□ -1
SMARCE1-201ENST00000264640 VPS33BQ9H267 617 aa8.79□□□□□ -1
SMARCE1-201ENST00000264640 R3HDMLQ9H3Y0 253 aa8.79□□□□□ -1
SMARCE1-201ENST00000264640 SCAF8Q9UPN6 1271 aaKnown RBP8.79□□□□□ -1
SMARCE1-201ENST00000264640 RRP7AQ9Y3A4 280 aaKnown RBP8.79□□□□□ -1
SMARCE1-201ENST00000264640 KIF16BQ96L93 1317 aa8.79□□□□□ -1
SMARCE1-201ENST00000264640 RTL9Q8NET4 1388 aa8.78□□□□□ -1
SMARCE1-201ENST00000264640 EVI5O60447 810 aa8.78□□□□□ -1
SMARCE1-201ENST00000264640 MYL6BP14649 208 aa8.78□□□□□ -1
SMARCE1-201ENST00000264640 RGS3P49796 1198 aa8.78□□□□□ -1
SMARCE1-201ENST00000264640 DCTN1Q14203 1278 aa8.78□□□□□ -1
SMARCE1-201ENST00000264640 ALDH1L2Q3SY69 923 aa8.78□□□□□ -1
SMARCE1-201ENST00000264640 DZIP1LQ8IYY4 767 aaKnown RBP8.78□□□□□ -1
SMARCE1-201ENST00000264640 KCNQ5Q9NR82 932 aa8.78□□□□□ -1
SMARCE1-201ENST00000264640 MIS18AQ9NYP9 233 aa8.78□□□□□ -1
SMARCE1-201ENST00000264640 DDX19BQ9UMR2 479 aa8.78□□□□□ -1
SMARCE1-201ENST00000264640 COG6Q9Y2V7 657 aa8.78□□□□□ -1
SMARCE1-201ENST00000264640 ERVV-1B6SEH8 477 aa8.77□□□□□ -1.01
SMARCE1-201ENST00000264640 EIF5BO60841 1220 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-201ENST00000264640 PRKAR2BP31323 418 aa8.77□□□□□ -1.01
SMARCE1-201ENST00000264640 NBR1Q14596 966 aa8.77□□□□□ -1.01
SMARCE1-201ENST00000264640 MVPQ14764 893 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-201ENST00000264640 PANK1Q8TE04 598 aa8.77□□□□□ -1.01
SMARCE1-201ENST00000264640 DPF2Q92785 391 aa8.77□□□□□ -1.01
SMARCE1-201ENST00000264640 ZDHHC16Q969W1 377 aa8.77□□□□□ -1.01
SMARCE1-201ENST00000264640 NLRP3Q96P20 1036 aa8.77□□□□□ -1.01
SMARCE1-201ENST00000264640 SMC4Q9NTJ3 1288 aa8.77□□□□□ -1.01
SMARCE1-201ENST00000264640 COL6A3P12111 3177 aa8.77□□□□□ -1.01
SMARCE1-201ENST00000264640 LAMB1P07942 1786 aa8.76□□□□□ -1.01
SMARCE1-201ENST00000264640 UBE2Q2LH0YL09 131 aa8.76□□□□□ -1.01
SMARCE1-201ENST00000264640 FKTNO75072 461 aa8.76□□□□□ -1.01
SMARCE1-201ENST00000264640 HCLS1P14317 486 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1-201ENST00000264640 EN2P19622 333 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1-201ENST00000264640 DEKP35659 375 aaKnown RBP8.76□□□□□ -1.01
SMARCE1-201ENST00000264640 RIPK4P57078 832 aa8.76□□□□□ -1.01
SMARCE1-201ENST00000264640 C8orf34Q49A92 452 aa8.76□□□□□ -1.01
SMARCE1-201ENST00000264640 ANGEL2Q5VTE6 544 aaKnown RBP8.76□□□□□ -1.01
SMARCE1-201ENST00000264640 PRAMEF18Q5VWM3 479 aa8.76□□□□□ -1.01
SMARCE1-201ENST00000264640 SP8Q8IXZ3 490 aa8.76□□□□□ -1.01
SMARCE1-201ENST00000264640 ZNF34Q8IZ26 560 aa8.76□□□□□ -1.01
SMARCE1-201ENST00000264640 PLEKHF1Q96S99 279 aa8.76□□□□□ -1.01
SMARCE1-201ENST00000264640 ADAM33Q9BZ11 813 aa8.76□□□□□ -1.01
SMARCE1-201ENST00000264640 TRIM17Q9Y577 477 aa8.76□□□□□ -1.01
SMARCE1-201ENST00000264640 ZNF646O15015 1829 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1-201ENST00000264640 GTPBP6O43824 516 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1-201ENST00000264640 ECE2O60344 883 aa8.75□□□□□ -1.01
SMARCE1-201ENST00000264640 GNAI1P63096 354 aa8.75□□□□□ -1.01
SMARCE1-201ENST00000264640 PPP1R42Q7Z4L9 355 aa8.75□□□□□ -1.01
SMARCE1-201ENST00000264640 MRPL50Q8N5N7 158 aaKnown RBP8.75□□□□□ -1.01
SMARCE1-201ENST00000264640 SLC17A8Q8NDX2 589 aa8.75□□□□□ -1.01
SMARCE1-201ENST00000264640 RANBP2P49792 3224 aaKnown RBP8.75□□□□□ -1.01
SMARCE1-201ENST00000264640 ZSWIM8A7E2V4 1837 aa8.75□□□□□ -1.01
SMARCE1-201ENST00000264640 SPEF2Q9C093 1822 aa8.75□□□□□ -1.01
SMARCE1-201ENST00000264640 A0A0C4DFX4 3053 aa8.74□□□□□ -1.01
SMARCE1-201ENST00000264640 BBOX1O75936 387 aa8.74□□□□□ -1.01
SMARCE1-201ENST00000264640 RPS12P25398 132 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-201ENST00000264640 EXOSC9Q06265 439 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-201ENST00000264640 SCARF1Q14162 830 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms