RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 GPT2Q8TD30 523 aa20.28■□□□□ 0.84
ITGA6-201ENST00000264107 MIS18AQ9NYP9 233 aa20.28■□□□□ 0.84
ITGA6-201ENST00000264107 PTPRCP08575 1304 aa20.28■□□□□ 0.84
ITGA6-201ENST00000264107 NLRP5P59047 1200 aa20.28■□□□□ 0.84
ITGA6-201ENST00000264107 CYP26C1Q6V0L0 522 aa20.28■□□□□ 0.84
ITGA6-201ENST00000264107 PAF1Q8N7H5 531 aa20.28■□□□□ 0.84
ITGA6-201ENST00000264107 DDX41Q9UJV9 622 aaKnown RBP20.28■□□□□ 0.84
ITGA6-201ENST00000264107 ERCC3P19447 782 aa20.28■□□□□ 0.84
ITGA6-201ENST00000264107 CCDC26Q8TAB7 109 aa20.28■□□□□ 0.84
ITGA6-201ENST00000264107 TSPYL2Q9H2G4 693 aaPredicted RBP20.28■□□□□ 0.84
ITGA6-201ENST00000264107 PSMA7O14818 248 aa20.28■□□□□ 0.84
ITGA6-201ENST00000264107 IFIT3O14879 490 aaKnown RBP20.28■□□□□ 0.84
ITGA6-201ENST00000264107 DDX21Q9NR30 783 aaKnown RBP eCLIP20.28■□□□□ 0.84
ITGA6-201ENST00000264107 EHBP1L1Q8N3D4 1523 aa20.28■□□□□ 0.84
ITGA6-201ENST00000264107 CNKSR2Q8WXI2 1034 aa20.28■□□□□ 0.84
ITGA6-201ENST00000264107 RAB34Q9BZG1 259 aa20.28■□□□□ 0.84
ITGA6-201ENST00000264107 FAN1Q9Y2M0 1017 aa20.28■□□□□ 0.84
ITGA6-201ENST00000264107 HMGXB3Q12766 1538 aa20.27■□□□□ 0.84
ITGA6-201ENST00000264107 CCDC194A0A1B0GVG4 234 aa20.27■□□□□ 0.84
ITGA6-201ENST00000264107 RAB3IPQ96QF0 476 aaPredicted RBP20.27■□□□□ 0.84
ITGA6-201ENST00000264107 TCP11L1Q9NUJ3 509 aa20.27■□□□□ 0.84
ITGA6-201ENST00000264107 IRAK4Q9NWZ3 460 aa20.27■□□□□ 0.84
ITGA6-201ENST00000264107 RNF123Q5XPI4 1314 aa20.27■□□□□ 0.84
ITGA6-201ENST00000264107 ZMAT2Q96NC0 199 aaKnown RBP20.27■□□□□ 0.84
ITGA6-201ENST00000264107 AKAP2Q9Y2D5 859 aa20.27■□□□□ 0.84
ITGA6-201ENST00000264107 Q6ZUG5 572 aa20.27■□□□□ 0.84
ITGA6-201ENST00000264107 SLC26A6Q9BXS9 759 aa20.27■□□□□ 0.84
ITGA6-201ENST00000264107 ATAD2Q6PL18 1390 aa20.27■□□□□ 0.84
ITGA6-201ENST00000264107 FYB2Q5VWT5 728 aa20.27■□□□□ 0.83
ITGA6-201ENST00000264107 MICU3Q86XE3 530 aa20.27■□□□□ 0.83
ITGA6-201ENST00000264107 MRC2Q9UBG0 1479 aa20.27■□□□□ 0.83
ITGA6-201ENST00000264107 MIER3Q7Z3K6 550 aa20.26■□□□□ 0.83
ITGA6-201ENST00000264107 SAAL1Q96ER3 474 aa20.26■□□□□ 0.83
ITGA6-201ENST00000264107 ALG1Q9BT22 464 aa20.26■□□□□ 0.83
ITGA6-201ENST00000264107 VCX3AQ9NNX9 186 aa20.26■□□□□ 0.83
ITGA6-201ENST00000264107 GNL3LQ9NVN8 582 aaKnown RBP20.26■□□□□ 0.83
ITGA6-201ENST00000264107 FAF1Q9UNN5 650 aaPredicted RBP20.26■□□□□ 0.83
ITGA6-201ENST00000264107 PRC1O43663 620 aa20.26■□□□□ 0.83
ITGA6-201ENST00000264107 ARHGAP24Q8N264 748 aa20.26■□□□□ 0.83
ITGA6-201ENST00000264107 DHX58Q96C10 678 aa20.26■□□□□ 0.83
ITGA6-201ENST00000264107 NUCKS1Q9H1E3 243 aaKnown RBP20.26■□□□□ 0.83
ITGA6-201ENST00000264107 IFIT1P09914 478 aaKnown RBP20.26■□□□□ 0.83
ITGA6-201ENST00000264107 TMEM266Q2M3C6 531 aa20.26■□□□□ 0.83
ITGA6-201ENST00000264107 TADA2BQ86TJ2 420 aa20.26■□□□□ 0.83
ITGA6-201ENST00000264107 CALML4Q96GE6 196 aa20.26■□□□□ 0.83
ITGA6-201ENST00000264107 IFT88Q13099 833 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 SF3B2Q13435 895 aaKnown RBP20.25■□□□□ 0.83
ITGA6-201ENST00000264107 ANKRD24Q8TF21 1146 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 SUFUQ9UMX1 484 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 SAMM50Q9Y512 469 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 C9orf84Q5VXU9 1444 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 OPHN1O60890 802 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 CLCN6P51797 869 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 ARID5AQ03989 594 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 LONRF2Q1L5Z9 754 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 TTC19Q6DKK2 380 aaPredicted RBP20.25■□□□□ 0.83
ITGA6-201ENST00000264107 PLEKHM2Q8IWE5 1019 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 RABGGTAQ92696 567 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 JAKMIP2Q96AA8 810 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 POLE2P56282 527 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 RASEFQ8IZ41 740 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 MORC4Q8TE76 937 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 BICC1Q9H694 974 aaKnown RBP20.25■□□□□ 0.83
ITGA6-201ENST00000264107 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 ATP2B2Q01814 1243 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 VPS52Q8N1B4 723 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 ARHGAP45Q92619 1136 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 ABTB1Q969K4 478 aaPredicted RBP20.25■□□□□ 0.83
ITGA6-201ENST00000264107 KLF18A0A0U1RQI7 1052 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 FLIIQ13045 1269 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 CALCOCO2Q13137 446 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 FBXO38Q6PIJ6 1188 aa20.25■□□□□ 0.83
ITGA6-201ENST00000264107 ATP2A1O14983 1001 aa20.24■□□□□ 0.83
ITGA6-201ENST00000264107 ANKRD44Q8N8A2 993 aa20.24■□□□□ 0.83
ITGA6-201ENST00000264107 SREK1Q8WXA9 508 aaKnown RBP20.24■□□□□ 0.83
ITGA6-201ENST00000264107 NAPBQ9H115 298 aa20.24■□□□□ 0.83
ITGA6-201ENST00000264107 EIF3CLB5ME19 914 aaKnown RBP20.24■□□□□ 0.83
ITGA6-201ENST00000264107 MYL6BP14649 208 aa20.24■□□□□ 0.83
ITGA6-201ENST00000264107 TPD52P55327 224 aaPredicted RBP20.24■□□□□ 0.83
ITGA6-201ENST00000264107 EIF3CQ99613 913 aaKnown RBP20.24■□□□□ 0.83
ITGA6-201ENST00000264107 TROQ12816 1431 aaPredicted RBP20.24■□□□□ 0.83
ITGA6-201ENST00000264107 TIAM1Q13009 1591 aa20.24■□□□□ 0.83
ITGA6-201ENST00000264107 MCM10Q7L590 875 aa20.24■□□□□ 0.83
ITGA6-201ENST00000264107 TAOK1Q7L7X3 1001 aa20.24■□□□□ 0.83
ITGA6-201ENST00000264107 PIK3R5Q8WYR1 880 aa20.24■□□□□ 0.83
ITGA6-201ENST00000264107 CCT6AP40227 531 aaKnown RBP20.24■□□□□ 0.83
ITGA6-201ENST00000264107 MTX1Q13505 466 aa20.24■□□□□ 0.83
ITGA6-201ENST00000264107 PLEKHO1Q53GL0 409 aaPredicted RBP20.24■□□□□ 0.83
ITGA6-201ENST00000264107 PHLDB3Q6NSJ2 640 aa20.24■□□□□ 0.83
ITGA6-201ENST00000264107 PSME1Q06323 249 aa20.23■□□□□ 0.83
ITGA6-201ENST00000264107 CCDC63Q8NA47 563 aa20.23■□□□□ 0.83
ITGA6-201ENST00000264107 XPO4Q9C0E2 1151 aaKnown RBP20.23■□□□□ 0.83
ITGA6-201ENST00000264107 RPGRIP1Q96KN7 1286 aa20.23■□□□□ 0.83
ITGA6-201ENST00000264107 NAIPQ13075 1403 aa20.23■□□□□ 0.83
ITGA6-201ENST00000264107 CETN1Q12798 172 aa20.23■□□□□ 0.83
ITGA6-201ENST00000264107 LARSQ9P2J5 1176 aaKnown RBP20.23■□□□□ 0.83
ITGA6-201ENST00000264107 RASSF2P50749 326 aa20.23■□□□□ 0.83
ITGA6-201ENST00000264107 NCBP1Q09161 790 aaKnown RBP20.23■□□□□ 0.83
ITGA6-201ENST00000264107 LONRF3Q496Y0 759 aa20.23■□□□□ 0.83
ITGA6-201ENST00000264107 ATL3Q6DD88 541 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms