RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 GBP6Q6ZN66 633 aa18.61■□□□□ 0.57
GPC1-201ENST00000264039 MAP3K19Q56UN5 1328 aa18.61■□□□□ 0.57
GPC1-201ENST00000264039 PFKFB1P16118 471 aa18.61■□□□□ 0.57
GPC1-201ENST00000264039 CCT6AP40227 531 aaKnown RBP18.61■□□□□ 0.57
GPC1-201ENST00000264039 CLIC6Q96NY7 704 aa18.61■□□□□ 0.57
GPC1-201ENST00000264039 JADE2Q9NQC1 790 aa18.61■□□□□ 0.57
GPC1-201ENST00000264039 TFRCP02786 760 aaKnown RBP18.61■□□□□ 0.57
GPC1-201ENST00000264039 DHX32Q7L7V1 743 aaKnown RBP18.61■□□□□ 0.57
GPC1-201ENST00000264039 L2HGDHQ9H9P8 463 aa18.61■□□□□ 0.57
GPC1-201ENST00000264039 PLCH2O75038 1416 aa18.6■□□□□ 0.57
GPC1-201ENST00000264039 FRMD3A2A2Y4 597 aa18.6■□□□□ 0.57
GPC1-201ENST00000264039 MTF1Q14872 753 aa18.6■□□□□ 0.57
GPC1-201ENST00000264039 PUS7Q96PZ0 661 aaKnown RBP18.6■□□□□ 0.57
GPC1-201ENST00000264039 RCOR1Q9UKL0 485 aa18.6■□□□□ 0.57
GPC1-201ENST00000264039 YTHDC2Q9H6S0 1430 aaKnown RBP18.6■□□□□ 0.57
GPC1-201ENST00000264039 ECM2O94769 699 aaPredicted RBP18.6■□□□□ 0.57
GPC1-201ENST00000264039 MRPS25P82663 173 aaKnown RBP18.6■□□□□ 0.57
GPC1-201ENST00000264039 EYA1Q99502 592 aa18.6■□□□□ 0.57
GPC1-201ENST00000264039 GPHNQ9NQX3 736 aaPredicted RBP18.6■□□□□ 0.57
GPC1-201ENST00000264039 PHLPP2Q6ZVD8 1323 aa18.6■□□□□ 0.57
GPC1-201ENST00000264039 TTC21AQ8NDW8 1320 aa18.6■□□□□ 0.57
GPC1-201ENST00000264039 ATP2B2Q01814 1243 aa18.6■□□□□ 0.57
GPC1-201ENST00000264039 OTUD6BQ8N6M0 293 aa18.6■□□□□ 0.57
GPC1-201ENST00000264039 AOX1Q06278 1338 aa18.6■□□□□ 0.57
GPC1-201ENST00000264039 MYO5CQ9NQX4 1742 aa18.59■□□□□ 0.57
GPC1-201ENST00000264039 INPP5BP32019 993 aa18.59■□□□□ 0.57
GPC1-201ENST00000264039 ZNF530Q6P9A1 599 aaPredicted RBP18.59■□□□□ 0.57
GPC1-201ENST00000264039 RIN2Q8WYP3 895 aaPredicted RBP18.59■□□□□ 0.57
GPC1-201ENST00000264039 CROCC2H7BZ55 1655 aa18.59■□□□□ 0.57
GPC1-201ENST00000264039 ARHGEF5Q12774 1597 aa18.59■□□□□ 0.57
GPC1-201ENST00000264039 CCDC151A5D8V7 595 aa18.59■□□□□ 0.57
GPC1-201ENST00000264039 POTEB2H3BUK9 544 aa18.59■□□□□ 0.57
GPC1-201ENST00000264039 ENC1O14682 589 aa18.59■□□□□ 0.57
GPC1-201ENST00000264039 ADALQ6DHV7 355 aa18.59■□□□□ 0.57
GPC1-201ENST00000264039 PSMB7Q99436 277 aa18.59■□□□□ 0.57
GPC1-201ENST00000264039 JPH2Q9BR39 696 aaPredicted RBP18.59■□□□□ 0.57
GPC1-201ENST00000264039 PLCD4Q9BRC7 762 aa18.59■□□□□ 0.57
GPC1-201ENST00000264039 OSBPL5Q9H0X9 879 aaPredicted RBP18.59■□□□□ 0.57
GPC1-201ENST00000264039 SOWAHDA6NJG2 315 aa18.59■□□□□ 0.57
GPC1-201ENST00000264039 PACS2Q86VP3 889 aa18.59■□□□□ 0.57
GPC1-201ENST00000264039 BCAS4Q8TDM0 211 aa18.59■□□□□ 0.57
GPC1-201ENST00000264039 SLC52A1Q9NWF4 448 aa18.59■□□□□ 0.57
GPC1-201ENST00000264039 CAPN7Q9Y6W3 813 aa18.59■□□□□ 0.57
GPC1-201ENST00000264039 ATP5J2-PTCD1G3V325 749 aa18.58■□□□□ 0.57
GPC1-201ENST00000264039 N4BP3O15049 544 aa18.58■□□□□ 0.57
GPC1-201ENST00000264039 PTCD1O75127 700 aaKnown RBP18.58■□□□□ 0.57
GPC1-201ENST00000264039 BRD3Q15059 726 aa18.58■□□□□ 0.57
GPC1-201ENST00000264039 MAP9Q49MG5 647 aa18.58■□□□□ 0.57
GPC1-201ENST00000264039 ATRIPQ8WXE1 791 aa18.58■□□□□ 0.57
GPC1-201ENST00000264039 CDC5LQ99459 802 aaKnown RBP18.58■□□□□ 0.57
GPC1-201ENST00000264039 PARP3Q9Y6F1 533 aa18.58■□□□□ 0.57
GPC1-201ENST00000264039 RNF40O75150 1001 aa18.58■□□□□ 0.56
GPC1-201ENST00000264039 CYP21A2P08686 494 aa18.58■□□□□ 0.56
GPC1-201ENST00000264039 CASP8Q14790 479 aa18.58■□□□□ 0.56
GPC1-201ENST00000264039 IGSF22Q8N9C0 903 aa18.58■□□□□ 0.56
GPC1-201ENST00000264039 FAM76AQ8TAV0 307 aa18.58■□□□□ 0.56
GPC1-201ENST00000264039 LRRC7Q96NW7 1537 aa18.58■□□□□ 0.56
GPC1-201ENST00000264039 ARHGEF40Q8TER5 1519 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 NDUFAB1O14561 156 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 PDE6BP35913 854 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 MCMDC2Q4G0Z9 681 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 ABTB2Q8N961 1025 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 MYD88Q99836 296 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 SLF1Q9BQI6 1058 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 ZFYVE9O95405 1425 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 KCNQ3O43525 872 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 ANO1Q5XXA6 986 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 STAMQ92783 540 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 NCAPGQ9BPX3 1015 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 MKRN1Q9UHC7 482 aaKnown RBP18.57■□□□□ 0.56
GPC1-201ENST00000264039 AKR1B15C9JRZ8 316 aaPredicted RBP18.57■□□□□ 0.56
GPC1-201ENST00000264039 ATP6V1AP38606 617 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 MUM1L1Q5H9M0 696 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 CCDC181Q5TID7 509 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 FBXW10Q5XX13 1052 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 NUP133Q8WUM0 1156 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 ALG1Q9BT22 464 aa18.57■□□□□ 0.56
GPC1-201ENST00000264039 SRGAP1Q7Z6B7 1085 aa18.56■□□□□ 0.56
GPC1-201ENST00000264039 NSUN7Q8NE18 718 aaKnown RBP18.56■□□□□ 0.56
GPC1-201ENST00000264039 GOLGA6CA6NDK9 693 aa18.56■□□□□ 0.56
GPC1-201ENST00000264039 GOLGA6DP0CG33 693 aa18.56■□□□□ 0.56
GPC1-201ENST00000264039 SLC20A2Q08357 652 aa18.56■□□□□ 0.56
GPC1-201ENST00000264039 SLC35F6Q8N357 371 aa18.56■□□□□ 0.56
GPC1-201ENST00000264039 SCLT1Q96NL6 688 aa18.56■□□□□ 0.56
GPC1-201ENST00000264039 FUT8Q9BYC5 575 aa18.56■□□□□ 0.56
GPC1-201ENST00000264039 GOLGA6AQ9NYA3 693 aa18.56■□□□□ 0.56
GPC1-201ENST00000264039 ATP1A2P50993 1020 aa18.56■□□□□ 0.56
GPC1-201ENST00000264039 SPECC1LQ69YQ0 1117 aa18.56■□□□□ 0.56
GPC1-201ENST00000264039 NCAPH2Q6IBW4 605 aa18.56■□□□□ 0.56
GPC1-201ENST00000264039 UBE3BQ7Z3V4 1068 aa18.56■□□□□ 0.56
GPC1-201ENST00000264039 DACH1Q9UI36 760 aa18.56■□□□□ 0.56
GPC1-201ENST00000264039 HMGB1P09429 215 aaKnown RBP18.55■□□□□ 0.56
GPC1-201ENST00000264039 GSPT2Q8IYD1 628 aaKnown RBP18.55■□□□□ 0.56
GPC1-201ENST00000264039 MAPK8IP1Q9UQF2 711 aa18.55■□□□□ 0.56
GPC1-201ENST00000264039 PCDHA5Q9Y5H7 936 aa18.55■□□□□ 0.56
GPC1-201ENST00000264039 ACEP12821 1306 aa18.55■□□□□ 0.56
GPC1-201ENST00000264039 ATP8B1O43520 1251 aa18.55■□□□□ 0.56
GPC1-201ENST00000264039 TAF5LO75529 589 aa18.55■□□□□ 0.56
GPC1-201ENST00000264039 NF2P35240 595 aa18.55■□□□□ 0.56
GPC1-201ENST00000264039 ODF2Q5BJF6 829 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms