RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 NCAPHQ15003 741 aa17.32■□□□□ 0.36
XRCC1-201ENST00000262887 REXO1L1PQ8IX06 675 aa17.32■□□□□ 0.36
XRCC1-201ENST00000262887 ARFGAP3Q9NP61 516 aa17.32■□□□□ 0.36
XRCC1-201ENST00000262887 SALL1Q9NSC2 1324 aa17.32■□□□□ 0.36
XRCC1-201ENST00000262887 TMEM2Q9UHN6 1383 aa17.31■□□□□ 0.36
XRCC1-201ENST00000262887 MYO1CO00159 1063 aa17.31■□□□□ 0.36
XRCC1-201ENST00000262887 ATP5JP18859 108 aa17.31■□□□□ 0.36
XRCC1-201ENST00000262887 UTP14AQ9BVJ6 771 aaKnown RBP17.31■□□□□ 0.36
XRCC1-201ENST00000262887 ABCC6O95255 1503 aa17.31■□□□□ 0.36
XRCC1-201ENST00000262887 UTYO14607 1347 aa17.31■□□□□ 0.36
XRCC1-201ENST00000262887 LINC00301Q8NCQ3 95 aa17.31■□□□□ 0.36
XRCC1-201ENST00000262887 GOLGA5Q8TBA6 731 aa17.31■□□□□ 0.36
XRCC1-201ENST00000262887 CARMIL3Q8ND23 1372 aa17.31■□□□□ 0.36
XRCC1-201ENST00000262887 ZSCAN12O43309 604 aa17.3■□□□□ 0.36
XRCC1-201ENST00000262887 GNL2Q13823 731 aaKnown RBP17.3■□□□□ 0.36
XRCC1-201ENST00000262887 C10orf67Q8IYJ2 551 aa17.3■□□□□ 0.36
XRCC1-201ENST00000262887 KCNG4Q8TDN1 519 aa17.3■□□□□ 0.36
XRCC1-201ENST00000262887 MPHOSPH8Q99549 860 aa17.3■□□□□ 0.36
XRCC1-201ENST00000262887 TMX1Q9H3N1 280 aa17.3■□□□□ 0.36
XRCC1-201ENST00000262887 DBNLQ9UJU6 430 aaKnown RBP17.3■□□□□ 0.36
XRCC1-201ENST00000262887 NEDD4P46934 1319 aa17.3■□□□□ 0.36
XRCC1-201ENST00000262887 ATP1A3P13637 1013 aa17.3■□□□□ 0.36
XRCC1-201ENST00000262887 AIMP1Q12904 312 aaKnown RBP17.3■□□□□ 0.36
XRCC1-201ENST00000262887 FCHSD1Q86WN1 690 aa17.3■□□□□ 0.36
XRCC1-201ENST00000262887 FAM177A1Q8N128 213 aaPredicted RBP17.3■□□□□ 0.36
XRCC1-201ENST00000262887 EXOC4Q96A65 974 aa17.3■□□□□ 0.36
XRCC1-201ENST00000262887 SLC26A8Q96RN1 970 aa17.3■□□□□ 0.36
XRCC1-201ENST00000262887 SLIT1O75093 1534 aa17.3■□□□□ 0.36
XRCC1-201ENST00000262887 FBXO18Q8NFZ0 1043 aa17.29■□□□□ 0.36
XRCC1-201ENST00000262887 CHMP4CQ96CF2 233 aa17.29■□□□□ 0.36
XRCC1-201ENST00000262887 PSD3Q9NYI0 1048 aa17.29■□□□□ 0.36
XRCC1-201ENST00000262887 CLIC4Q9Y696 253 aa17.29■□□□□ 0.36
XRCC1-201ENST00000262887 DDX58O95786 925 aaKnown RBP17.29■□□□□ 0.36
XRCC1-201ENST00000262887 MPRIPQ6WCQ1 1025 aa17.29■□□□□ 0.36
XRCC1-201ENST00000262887 LCMT1Q9UIC8 334 aa17.29■□□□□ 0.36
XRCC1-201ENST00000262887 RFX7Q2KHR2 1363 aa17.29■□□□□ 0.36
XRCC1-201ENST00000262887 IKBKBO14920 756 aa17.29■□□□□ 0.36
XRCC1-201ENST00000262887 TRIM66O15016 1216 aa17.29■□□□□ 0.36
XRCC1-201ENST00000262887 ZNF202O95125 648 aa17.29■□□□□ 0.36
XRCC1-201ENST00000262887 SERPINC1P01008 464 aa17.29■□□□□ 0.36
XRCC1-201ENST00000262887 CASQ1P31415 396 aa17.29■□□□□ 0.36
XRCC1-201ENST00000262887 UBASH3AP57075 661 aa17.29■□□□□ 0.36
XRCC1-201ENST00000262887 ISM2Q6H9L7 571 aa17.29■□□□□ 0.36
XRCC1-201ENST00000262887 ADAM21Q9UKJ8 722 aa17.29■□□□□ 0.36
XRCC1-201ENST00000262887 VWA3AA6NCI4 1184 aa17.28■□□□□ 0.36
XRCC1-201ENST00000262887 CBFA2T2O43439 604 aa17.28■□□□□ 0.36
XRCC1-201ENST00000262887 POLR3DP05423 398 aaPredicted RBP17.28■□□□□ 0.36
XRCC1-201ENST00000262887 LMAN1P49257 510 aa17.28■□□□□ 0.36
XRCC1-201ENST00000262887 MAP3K9P80192 1104 aa17.28■□□□□ 0.36
XRCC1-201ENST00000262887 CFAP100Q494V2 611 aa17.28■□□□□ 0.36
XRCC1-201ENST00000262887 DDX46Q7L014 1031 aaKnown RBP17.28■□□□□ 0.36
XRCC1-201ENST00000262887 FUT8Q9BYC5 575 aa17.28■□□□□ 0.36
XRCC1-201ENST00000262887 PARD6BQ9BYG5 372 aa17.28■□□□□ 0.36
XRCC1-201ENST00000262887 MRC1P22897 1456 aa17.28■□□□□ 0.36
XRCC1-201ENST00000262887 SPTLC2O15270 562 aa17.28■□□□□ 0.36
XRCC1-201ENST00000262887 PDIA3P30101 505 aaKnown RBP17.28■□□□□ 0.36
XRCC1-201ENST00000262887 NOP2P46087 812 aaKnown RBP17.28■□□□□ 0.36
XRCC1-201ENST00000262887 PPP2R3AQ06190 1150 aa17.28■□□□□ 0.36
XRCC1-201ENST00000262887 TNNI3KQ59H18 835 aa17.28■□□□□ 0.36
XRCC1-201ENST00000262887 ZNF530Q6P9A1 599 aaPredicted RBP17.28■□□□□ 0.36
XRCC1-201ENST00000262887 RSRC2Q7L4I2 434 aaKnown RBP17.28■□□□□ 0.36
XRCC1-201ENST00000262887 ABTB2Q8N961 1025 aa17.28■□□□□ 0.36
XRCC1-201ENST00000262887 AGXT2Q9BYV1 514 aa17.28■□□□□ 0.36
XRCC1-201ENST00000262887 FPGT-TNNI3KV9GXZ4 949 aa17.28■□□□□ 0.36
XRCC1-201ENST00000262887 PRAMEF22A3QJZ6 481 aa17.27■□□□□ 0.36
XRCC1-201ENST00000262887 YEATS4O95619 227 aa17.27■□□□□ 0.36
XRCC1-201ENST00000262887 PSEN1P49768 467 aa17.27■□□□□ 0.36
XRCC1-201ENST00000262887 GYS2P54840 703 aa17.27■□□□□ 0.36
XRCC1-201ENST00000262887 EXOSC10Q01780 885 aaKnown RBP17.27■□□□□ 0.36
XRCC1-201ENST00000262887 PPP2R2CQ9Y2T4 447 aa17.27■□□□□ 0.36
XRCC1-201ENST00000262887 LAMA4Q16363 1823 aa17.27■□□□□ 0.36
XRCC1-201ENST00000262887 SRLQ86TD4 932 aa17.27■□□□□ 0.35
XRCC1-201ENST00000262887 RABGGTAQ92696 567 aa17.27■□□□□ 0.35
XRCC1-201ENST00000262887 AKAP4Q5JQC9 854 aa17.26■□□□□ 0.35
XRCC1-201ENST00000262887 NBPF6Q5VWK0 638 aa17.26■□□□□ 0.35
XRCC1-201ENST00000262887 OTUD7BQ6GQQ9 843 aa17.26■□□□□ 0.35
XRCC1-201ENST00000262887 CHST3Q7LGC8 479 aa17.26■□□□□ 0.35
XRCC1-201ENST00000262887 DPF2Q92785 391 aa17.26■□□□□ 0.35
XRCC1-201ENST00000262887 ZNF274Q96GC6 653 aaPredicted RBP17.26■□□□□ 0.35
XRCC1-201ENST00000262887 NBPF4Q96M43 638 aa17.26■□□□□ 0.35
XRCC1-201ENST00000262887 POLR3EQ9NVU0 708 aa17.26■□□□□ 0.35
XRCC1-201ENST00000262887 MRFAP1Q9Y605 127 aa17.26■□□□□ 0.35
XRCC1-201ENST00000262887 TOP1P11387 765 aaKnown RBP17.26■□□□□ 0.35
XRCC1-201ENST00000262887 FDPSP14324 419 aaKnown RBP17.26■□□□□ 0.35
XRCC1-201ENST00000262887 GNG11P61952 73 aa17.26■□□□□ 0.35
XRCC1-201ENST00000262887 GOLGA8FQ08AF8 430 aa17.26■□□□□ 0.35
XRCC1-201ENST00000262887 GOLGA8DPQ0D2H9 430 aa17.26■□□□□ 0.35
XRCC1-201ENST00000262887 TFCP2Q12800 502 aa17.26■□□□□ 0.35
XRCC1-201ENST00000262887 HSD3B7Q9H2F3 369 aa17.26■□□□□ 0.35
XRCC1-201ENST00000262887 ARHGAP6O43182 974 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 IGKV5-2P06315 115 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 JAKMIP3Q5VZ66 844 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 C14orf37Q86TY3 774 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 WDR24Q96S15 920 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 ATG3Q9NT62 314 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 RRP15Q9Y3B9 282 aaKnown RBP17.25■□□□□ 0.35
XRCC1-201ENST00000262887 GOLGA6L9A6NEM1 432 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 E7EWF7 191 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 PFKFB1P16118 471 aa17.25■□□□□ 0.35
XRCC1-201ENST00000262887 ACTN2P35609 894 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms