RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 SVIPQ8NHG7 77 aa6.79□□□□□ -1.32
ITCH-201ENST00000262650 BRINP2Q9C0B6 783 aa6.79□□□□□ -1.32
ITCH-201ENST00000262650 CUEDC1Q9NWM3 386 aaPredicted RBP6.79□□□□□ -1.32
ITCH-201ENST00000262650 SRP68Q9UHB9 627 aaKnown RBP6.79□□□□□ -1.32
ITCH-201ENST00000262650 SNED1Q8TER0 1413 aa6.79□□□□□ -1.32
ITCH-201ENST00000262650 KLRG2A4D1S0 409 aaPredicted RBP6.79□□□□□ -1.32
ITCH-201ENST00000262650 IBSPP21815 317 aaPredicted RBP6.79□□□□□ -1.32
ITCH-201ENST00000262650 VAMP1P23763 118 aa6.79□□□□□ -1.32
ITCH-201ENST00000262650 RRP1P56182 461 aaKnown RBP6.79□□□□□ -1.32
ITCH-201ENST00000262650 NFIXQ14938 502 aa6.79□□□□□ -1.32
ITCH-201ENST00000262650 KIF20AO95235 890 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 LDHCP07864 332 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 MAN1A1P33908 653 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 TNNT2P45379 298 aaPredicted RBP6.78□□□□□ -1.32
ITCH-201ENST00000262650 GAS2L2Q8NHY3 880 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 SLC39A13Q96H72 371 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 NBPF3Q9H094 633 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 AKAP2Q9Y2D5 859 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 FGAP02671 866 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 IL6STP40189 918 aaPredicted RBP6.78□□□□□ -1.32
ITCH-201ENST00000262650 CCT2P78371 535 aaKnown RBP6.78□□□□□ -1.32
ITCH-201ENST00000262650 PSMD2Q13200 908 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 KCTD2Q14681 263 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 IL17REQ8NFR9 667 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 CEP83Q9Y592 693 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 COL4A3BPQ9Y5P4 624 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 LAMB2P55268 1798 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 FCHSD2O94868 740 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 PRELPP51888 382 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 C9orf131Q5VYM1 1079 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 USPL1Q5W0Q7 1092 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 CCDC174Q6PII3 467 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 TTC30AQ86WT1 665 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 HSCBQ8IWL3 235 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 BACH2Q9BYV9 841 aa6.78□□□□□ -1.32
ITCH-201ENST00000262650 ISY1Q9ULR0 285 aaKnown RBP6.78□□□□□ -1.32
ITCH-201ENST00000262650 KDM2BQ8NHM5 1336 aa6.77□□□□□ -1.32
ITCH-201ENST00000262650 IBTKQ9P2D0 1353 aaPredicted RBP6.77□□□□□ -1.32
ITCH-201ENST00000262650 GNAT3A8MTJ3 354 aa6.77□□□□□ -1.33
ITCH-201ENST00000262650 NAT2P11245 290 aa6.77□□□□□ -1.33
ITCH-201ENST00000262650 IFT88Q13099 833 aa6.77□□□□□ -1.33
ITCH-201ENST00000262650 LONRF1Q17RB8 773 aa6.77□□□□□ -1.33
ITCH-201ENST00000262650 MAP9Q49MG5 647 aa6.77□□□□□ -1.33
ITCH-201ENST00000262650 CC2D1AQ6P1N0 951 aaPredicted RBP6.77□□□□□ -1.33
ITCH-201ENST00000262650 ANKRD13BQ86YJ7 626 aa6.77□□□□□ -1.33
ITCH-201ENST00000262650 CALR3Q96L12 384 aaKnown RBP6.77□□□□□ -1.33
ITCH-201ENST00000262650 BCS1LQ9Y276 419 aa6.77□□□□□ -1.33
ITCH-201ENST00000262650 ZBTB1Q9Y2K1 713 aa6.77□□□□□ -1.33
ITCH-201ENST00000262650 CARMIL3Q8ND23 1372 aa6.77□□□□□ -1.33
ITCH-201ENST00000262650 PTCD1O75127 700 aaKnown RBP6.77□□□□□ -1.33
ITCH-201ENST00000262650 ZPR1O75312 459 aa6.77□□□□□ -1.33
ITCH-201ENST00000262650 STYK1Q6J9G0 422 aa6.77□□□□□ -1.33
ITCH-201ENST00000262650 ARHGAP27Q6ZUM4 889 aa6.77□□□□□ -1.33
ITCH-201ENST00000262650 BRIP1Q9BX63 1249 aa6.77□□□□□ -1.33
ITCH-201ENST00000262650 LRRC37AA6NMS7 1700 aa6.76□□□□□ -1.33
ITCH-201ENST00000262650 PES1O00541 588 aaKnown RBP6.76□□□□□ -1.33
ITCH-201ENST00000262650 STARD3NLO95772 234 aa6.76□□□□□ -1.33
ITCH-201ENST00000262650 SERPINB2P05120 415 aa6.76□□□□□ -1.33
ITCH-201ENST00000262650 PAX7P23759 505 aa6.76□□□□□ -1.33
ITCH-201ENST00000262650 ZNF790Q6PG37 636 aa6.76□□□□□ -1.33
ITCH-201ENST00000262650 C22orf23Q9BZE7 217 aa6.76□□□□□ -1.33
ITCH-201ENST00000262650 PCDH12Q9NPG4 1184 aa6.76□□□□□ -1.33
ITCH-201ENST00000262650 HIP1RO75146 1068 aa6.76□□□□□ -1.33
ITCH-201ENST00000262650 HMMRO75330 724 aa6.76□□□□□ -1.33
ITCH-201ENST00000262650 CAMTA2O94983 1202 aa6.76□□□□□ -1.33
ITCH-201ENST00000262650 LMNB1P20700 586 aa6.76□□□□□ -1.33
ITCH-201ENST00000262650 TBC1D2BQ9UPU7 963 aa6.76□□□□□ -1.33
ITCH-201ENST00000262650 IPO5O00410 1097 aaKnown RBP6.75□□□□□ -1.33
ITCH-201ENST00000262650 PRC1O43663 620 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 DMTNQ08495 405 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 UBE4AQ14139 1066 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 DUSP27Q5VZP5 1158 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 VPS37AQ8NEZ2 397 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 C7orf43Q8WVR3 580 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 DHX38Q92620 1227 aaKnown RBP6.75□□□□□ -1.33
ITCH-201ENST00000262650 CHMP4CQ96CF2 233 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 TRIM34Q9BYJ4 488 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 CASS4Q9NQ75 786 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 GLTPD2A6NH11 291 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 POTECB2RU33 542 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 NFKBIEO00221 500 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 MPHOSPH10O00566 681 aaKnown RBP6.75□□□□□ -1.33
ITCH-201ENST00000262650 C7P10643 843 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 CCDC92Q53HC0 331 aaPredicted RBP6.75□□□□□ -1.33
ITCH-201ENST00000262650 CCDC70Q6NSX1 233 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 KRT77Q7Z794 578 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 TTLL6Q8N841 843 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 ZNF496Q96IT1 587 aaPredicted RBP6.75□□□□□ -1.33
ITCH-201ENST00000262650 VRTNQ9H8Y1 702 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 NMRK2Q9NPI5 230 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 TRPM7Q96QT4 1865 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 TMEM88BA6NKF7 163 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 PDE4AP27815 886 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 CHRNA5P30532 468 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 CASQ1P31415 396 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 HMGN5P82970 282 aaKnown RBP6.75□□□□□ -1.33
ITCH-201ENST00000262650 POU5F1BQ06416 359 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 SLC39A6Q13433 755 aa6.75□□□□□ -1.33
ITCH-201ENST00000262650 BMS1Q14692 1282 aaKnown RBP6.75□□□□□ -1.33
ITCH-201ENST00000262650 SKAP1Q86WV1 359 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms