RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 USP50Q70EL3 339 aaPredicted RBP23.06■■□□□ 1.28
CYSTM1-201ENST00000261811 MICALL2Q8IY33 904 aa23.06■■□□□ 1.28
CYSTM1-201ENST00000261811 XAGE2Q96GT9 111 aa23.06■■□□□ 1.28
CYSTM1-201ENST00000261811 FPGT-TNNI3KV9GXZ4 949 aa23.06■■□□□ 1.28
CYSTM1-201ENST00000261811 USP17L8P0C7I0 530 aa23.05■■□□□ 1.28
CYSTM1-201ENST00000261811 EPS15P42566 896 aa23.05■■□□□ 1.28
CYSTM1-201ENST00000261811 EAPPQ56P03 285 aaPredicted RBP23.05■■□□□ 1.28
CYSTM1-201ENST00000261811 CLASRPQ8N2M8 674 aaKnown RBP23.05■■□□□ 1.28
CYSTM1-201ENST00000261811 RHPN1Q8TCX5 695 aa23.05■■□□□ 1.28
CYSTM1-201ENST00000261811 CCDC158Q5M9N0 1113 aa23.04■■□□□ 1.28
CYSTM1-201ENST00000261811 CCDC102BQ68D86 513 aa23.04■■□□□ 1.28
CYSTM1-201ENST00000261811 DENND2AQ9ULE3 1009 aa23.04■■□□□ 1.28
CYSTM1-201ENST00000261811 CLEC11AQ9Y240 323 aa23.04■■□□□ 1.28
CYSTM1-201ENST00000261811 APBB1O00213 710 aa23.03■■□□□ 1.28
CYSTM1-201ENST00000261811 EXOC6Q8TAG9 804 aa23.03■■□□□ 1.28
CYSTM1-201ENST00000261811 RBM46Q8TBY0 533 aaKnown RBP23.03■■□□□ 1.28
CYSTM1-201ENST00000261811 WDR66Q8TBY9 1149 aa23.03■■□□□ 1.28
CYSTM1-201ENST00000261811 IQSEC3Q9UPP2 1182 aaPredicted RBP23.03■■□□□ 1.28
CYSTM1-201ENST00000261811 PCDHB15Q9Y5E8 787 aa23.03■■□□□ 1.28
CYSTM1-201ENST00000261811 UQCRFS1P1P0C7P4 283 aa23.02■■□□□ 1.28
CYSTM1-201ENST00000261811 ADORA1P30542 326 aa23.02■■□□□ 1.28
CYSTM1-201ENST00000261811 CHAF1AQ13111 956 aaPredicted RBP23.02■■□□□ 1.28
CYSTM1-201ENST00000261811 MFSD14BQ5SR56 506 aa23.02■■□□□ 1.28
CYSTM1-201ENST00000261811 LDHDQ86WU2 507 aa23.02■■□□□ 1.28
CYSTM1-201ENST00000261811 SMC1BQ8NDV3 1235 aa23.02■■□□□ 1.28
CYSTM1-201ENST00000261811 LRRCC1Q9C099 1032 aa23.02■■□□□ 1.28
CYSTM1-201ENST00000261811 ZBTB47Q9UFB7 747 aaPredicted RBP23.02■■□□□ 1.28
CYSTM1-201ENST00000261811 POLR2AP24928 1970 aaKnown RBP23.01■■□□□ 1.27
CYSTM1-201ENST00000261811 ZBTB22O15209 634 aa23.01■■□□□ 1.27
CYSTM1-201ENST00000261811 PHKA1P46020 1223 aa23.01■■□□□ 1.27
CYSTM1-201ENST00000261811 GMLQ99445 158 aa23.01■■□□□ 1.27
CYSTM1-201ENST00000261811 DCTPP1Q9H773 170 aa23.01■■□□□ 1.27
CYSTM1-201ENST00000261811 ECM29Q5VYK3 1845 aa23.01■■□□□ 1.27
CYSTM1-201ENST00000261811 TTC39AQ5SRH9 613 aa23■■□□□ 1.27
CYSTM1-201ENST00000261811 AACSQ86V21 672 aa23■■□□□ 1.27
CYSTM1-201ENST00000261811 KIAA0825Q8IV33 1275 aa23■■□□□ 1.27
CYSTM1-201ENST00000261811 ZGPATQ8N5A5 531 aaKnown RBP23■■□□□ 1.27
CYSTM1-201ENST00000261811 RWDD1Q9H446 243 aaPredicted RBP23■■□□□ 1.27
CYSTM1-201ENST00000261811 IFIT2P09913 472 aaKnown RBP22.99■■□□□ 1.27
CYSTM1-201ENST00000261811 ZNF280AP59817 542 aaPredicted RBP22.99■■□□□ 1.27
CYSTM1-201ENST00000261811 FSTL1Q12841 308 aa22.99■■□□□ 1.27
CYSTM1-201ENST00000261811 MXD3Q9BW11 206 aa22.99■■□□□ 1.27
CYSTM1-201ENST00000261811 IL1RAPL2Q9NP60 686 aa22.99■■□□□ 1.27
CYSTM1-201ENST00000261811 JAG2Q9Y219 1238 aa22.99■■□□□ 1.27
CYSTM1-201ENST00000261811 SUGT1Q9Y2Z0 365 aa22.99■■□□□ 1.27
CYSTM1-201ENST00000261811 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.99■■□□□ 1.27
CYSTM1-201ENST00000261811 ADAMTSL1Q8N6G6 1762 aa22.98■■□□□ 1.27
CYSTM1-201ENST00000261811 MAST3O60307 1309 aa22.98■■□□□ 1.27
CYSTM1-201ENST00000261811 PDS5AQ29RF7 1337 aaKnown RBP22.98■■□□□ 1.27
CYSTM1-201ENST00000261811 HDAC1Q13547 482 aaPredicted RBP22.98■■□□□ 1.27
CYSTM1-201ENST00000261811 KIF4BQ2VIQ3 1234 aa22.98■■□□□ 1.27
CYSTM1-201ENST00000261811 RBM26Q5T8P6 1007 aaKnown RBP22.98■■□□□ 1.27
CYSTM1-201ENST00000261811 CHADLQ6NUI6 762 aa22.98■■□□□ 1.27
CYSTM1-201ENST00000261811 ZC3H15Q8WU90 426 aaKnown RBP22.98■■□□□ 1.27
CYSTM1-201ENST00000261811 EAF2Q96CJ1 260 aaPredicted RBP22.98■■□□□ 1.27
CYSTM1-201ENST00000261811 MYOZ2Q9NPC6 264 aa22.98■■□□□ 1.27
CYSTM1-201ENST00000261811 IRX6P78412 446 aaPredicted RBP22.97■■□□□ 1.27
CYSTM1-201ENST00000261811 TBC1D10BQ4KMP7 808 aaPredicted RBP22.97■■□□□ 1.27
CYSTM1-201ENST00000261811 GCC1Q96CN9 775 aa22.97■■□□□ 1.27
CYSTM1-201ENST00000261811 DBNDD2Q9BQY9 259 aa22.97■■□□□ 1.27
CYSTM1-201ENST00000261811 CCDC8Q9H0W5 538 aaPredicted RBP22.97■■□□□ 1.27
CYSTM1-201ENST00000261811 AKAP11Q9UKA4 1901 aa22.96■■□□□ 1.27
CYSTM1-201ENST00000261811 ARID4AP29374 1257 aaPredicted RBP22.96■■□□□ 1.27
CYSTM1-201ENST00000261811 SPTY2D1Q68D10 685 aaPredicted RBP22.96■■□□□ 1.27
CYSTM1-201ENST00000261811 SAMD7Q7Z3H4 446 aa22.96■■□□□ 1.27
CYSTM1-201ENST00000261811 BCL11AQ9H165 835 aa22.96■■□□□ 1.27
CYSTM1-201ENST00000261811 TTF2Q9UNY4 1162 aaKnown RBP22.96■■□□□ 1.27
CYSTM1-201ENST00000261811 MYH2Q9UKX2 1941 aa22.95■■□□□ 1.26
CYSTM1-201ENST00000261811 F8W031 263 aaPredicted RBP22.95■■□□□ 1.26
CYSTM1-201ENST00000261811 CERS5Q8N5B7 392 aa22.95■■□□□ 1.26
CYSTM1-201ENST00000261811 ZNF512BQ96KM6 892 aaPredicted RBP22.95■■□□□ 1.26
CYSTM1-201ENST00000261811 RASGRF1Q13972 1273 aa22.94■■□□□ 1.26
CYSTM1-201ENST00000261811 SPATA5Q8NB90 893 aa22.94■■□□□ 1.26
CYSTM1-201ENST00000261811 DBNLQ9UJU6 430 aaKnown RBP22.94■■□□□ 1.26
CYSTM1-201ENST00000261811 SALL1Q9NSC2 1324 aa22.94■■□□□ 1.26
CYSTM1-201ENST00000261811 SHTN1A0MZ66 631 aa22.93■■□□□ 1.26
CYSTM1-201ENST00000261811 MYO1BO43795 1136 aa22.93■■□□□ 1.26
CYSTM1-201ENST00000261811 NEFLP07196 543 aa22.93■■□□□ 1.26
CYSTM1-201ENST00000261811 RBM5P52756 815 aaKnown RBP eCLIP22.93■■□□□ 1.26
CYSTM1-201ENST00000261811 C1QTNF8P60827 252 aa22.93■■□□□ 1.26
CYSTM1-201ENST00000261811 DLGAP5Q15398 846 aa22.93■■□□□ 1.26
CYSTM1-201ENST00000261811 TRPM4Q8TD43 1214 aa22.93■■□□□ 1.26
CYSTM1-201ENST00000261811 DCPSQ96C86 337 aaKnown RBP22.93■■□□□ 1.26
CYSTM1-201ENST00000261811 SERPINA10Q9UK55 444 aa22.93■■□□□ 1.26
CYSTM1-201ENST00000261811 TRPM7Q96QT4 1865 aa22.93■■□□□ 1.26
CYSTM1-201ENST00000261811 LDHBP07195 334 aaKnown RBP22.92■■□□□ 1.26
CYSTM1-201ENST00000261811 HDLBPQ00341 1268 aaKnown RBP22.92■■□□□ 1.26
CYSTM1-201ENST00000261811 GPATCH3Q96I76 525 aa22.92■■□□□ 1.26
CYSTM1-201ENST00000261811 POTEIP0CG38 1075 aa22.91■■□□□ 1.26
CYSTM1-201ENST00000261811 POTEJP0CG39 1038 aa22.91■■□□□ 1.26
CYSTM1-201ENST00000261811 SLF2Q8IX21 1173 aa22.91■■□□□ 1.26
CYSTM1-201ENST00000261811 HMG20BQ9P0W2 317 aa22.91■■□□□ 1.26
CYSTM1-201ENST00000261811 ABCF2Q9UG63 623 aa22.91■■□□□ 1.26
CYSTM1-201ENST00000261811 HIRAP54198 1017 aaPredicted RBP22.9■■□□□ 1.26
CYSTM1-201ENST00000261811 SCARF1Q14162 830 aa22.9■■□□□ 1.26
CYSTM1-201ENST00000261811 CNTROBQ8N137 903 aa22.9■■□□□ 1.26
CYSTM1-201ENST00000261811 MTMR14Q8NCE2 650 aa22.9■■□□□ 1.26
CYSTM1-201ENST00000261811 TEKT1Q969V4 418 aa22.9■■□□□ 1.26
CYSTM1-201ENST00000261811 MRIQ9BWK5 157 aa22.9■■□□□ 1.26
CYSTM1-201ENST00000261811 TLR7Q9NYK1 1049 aaKnown RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms