RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 RHOXF2Q9BQY4 288 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 CAPN2P17655 700 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 CNNM2Q9H8M5 875 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 OGFOD1Q8N543 542 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 SIRT1Q96EB6 747 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 CHD1O14646 1710 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 ATP2A2P16615 1042 aaKnown RBP16.14■□□□□ 0.17
CUX2-201ENST00000261726 CCDC42Q96M95 316 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 RTL1A6NKG5 1358 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 LMOD1P29536 600 aaPredicted RBP16.14■□□□□ 0.17
CUX2-201ENST00000261726 KRT83P78385 493 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 DCAF17Q5H9S7 520 aaPredicted RBP16.13■□□□□ 0.17
CUX2-201ENST00000261726 PPP1R21Q6ZMI0 780 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 CHST3Q7LGC8 479 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 CAVIN2O95810 425 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 SPAG1Q07617 926 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 RAPGEF1Q13905 1077 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 KRT28Q7Z3Y7 464 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 UBLCP1Q8WVY7 318 aaPredicted RBP16.13■□□□□ 0.17
CUX2-201ENST00000261726 KRT86O43790 486 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 GMNNO75496 209 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 NOLC1Q14978 699 aaKnown RBP eCLIP16.13■□□□□ 0.17
CUX2-201ENST00000261726 CHRNA2Q15822 529 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 CCDC14Q49A88 953 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 KIAA1524Q8TCG1 905 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 SETDB2Q96T68 719 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 RBM8AQ9Y5S9 174 aaKnown RBP16.13■□□□□ 0.17
CUX2-201ENST00000261726 IRX5P78411 483 aaPredicted RBP16.13■□□□□ 0.17
CUX2-201ENST00000261726 CCT6BQ92526 530 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 RRP36Q96EU6 259 aaKnown RBP16.13■□□□□ 0.17
CUX2-201ENST00000261726 HAUS7Q99871 368 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 MBIPQ9NS73 344 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 DACT1Q9NYF0 836 aa16.13■□□□□ 0.17
CUX2-201ENST00000261726 MKRN1Q9UHC7 482 aaKnown RBP16.13■□□□□ 0.17
CUX2-201ENST00000261726 KRT5P13647 590 aa16.12■□□□□ 0.17
CUX2-201ENST00000261726 ZNF569Q5MCW4 686 aa16.12■□□□□ 0.17
CUX2-201ENST00000261726 TMTC2Q8N394 836 aa16.12■□□□□ 0.17
CUX2-201ENST00000261726 ZGPATQ8N5A5 531 aaKnown RBP16.12■□□□□ 0.17
CUX2-201ENST00000261726 MRRFQ96E11 262 aaKnown RBP16.12■□□□□ 0.17
CUX2-201ENST00000261726 PKD2L1Q9P0L9 805 aa16.12■□□□□ 0.17
CUX2-201ENST00000261726 MAGEB6P1A0A0J9YX57 407 aa16.12■□□□□ 0.17
CUX2-201ENST00000261726 FAM160A1Q05DH4 1040 aa16.12■□□□□ 0.17
CUX2-201ENST00000261726 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
CUX2-201ENST00000261726 KRT79Q5XKE5 535 aa16.12■□□□□ 0.17
CUX2-201ENST00000261726 ANKRD13DQ6ZTN6 518 aa16.12■□□□□ 0.17
CUX2-201ENST00000261726 RHPN1Q8TCX5 695 aa16.12■□□□□ 0.17
CUX2-201ENST00000261726 HARSP12081 509 aaKnown RBP16.12■□□□□ 0.17
CUX2-201ENST00000261726 SEPT6Q14141 434 aa16.12■□□□□ 0.17
CUX2-201ENST00000261726 KRT2P35908 639 aa16.11■□□□□ 0.17
CUX2-201ENST00000261726 ATP6V1AP38606 617 aa16.11■□□□□ 0.17
CUX2-201ENST00000261726 KLHL40Q2TBA0 621 aa16.11■□□□□ 0.17
CUX2-201ENST00000261726 MSANTD4Q8NCY6 345 aa16.11■□□□□ 0.17
CUX2-201ENST00000261726 AMOTL2Q9Y2J4 779 aa16.11■□□□□ 0.17
CUX2-201ENST00000261726 DNM1Q05193 864 aaKnown RBP16.11■□□□□ 0.17
CUX2-201ENST00000261726 NAA25Q14CX7 972 aa16.11■□□□□ 0.17
CUX2-201ENST00000261726 BMP2KLQ5H9B9 411 aa16.11■□□□□ 0.17
CUX2-201ENST00000261726 SLC9C2Q5TAH2 1124 aa16.11■□□□□ 0.17
CUX2-201ENST00000261726 CCDC117Q8IWD4 279 aaPredicted RBP16.11■□□□□ 0.17
CUX2-201ENST00000261726 ERCC5P28715 1186 aaPredicted RBP16.11■□□□□ 0.17
CUX2-201ENST00000261726 CHPF2Q9P2E5 772 aa16.11■□□□□ 0.17
CUX2-201ENST00000261726 GNAQP50148 359 aa16.11■□□□□ 0.17
CUX2-201ENST00000261726 TRAF1Q13077 416 aa16.11■□□□□ 0.17
CUX2-201ENST00000261726 MCMDC2Q4G0Z9 681 aa16.11■□□□□ 0.17
CUX2-201ENST00000261726 ANKRD24Q8TF21 1146 aa16.11■□□□□ 0.17
CUX2-201ENST00000261726 GAS8O95995 478 aa16.11■□□□□ 0.17
CUX2-201ENST00000261726 AGTPBP1Q9UPW5 1226 aa16.11■□□□□ 0.17
CUX2-201ENST00000261726 KRT9P35527 623 aa16.1■□□□□ 0.17
CUX2-201ENST00000261726 SAMD15Q9P1V8 674 aa16.1■□□□□ 0.17
CUX2-201ENST00000261726 LRPPRCP42704 1394 aaKnown RBP16.1■□□□□ 0.17
CUX2-201ENST00000261726 SETDB1Q15047 1291 aa16.1■□□□□ 0.17
CUX2-201ENST00000261726 NCOA1Q15788 1441 aa16.1■□□□□ 0.17
CUX2-201ENST00000261726 BACH1O14867 736 aa16.1■□□□□ 0.17
CUX2-201ENST00000261726 SDSP20132 328 aa16.1■□□□□ 0.17
CUX2-201ENST00000261726 TMCO4Q5TGY1 634 aa16.1■□□□□ 0.17
CUX2-201ENST00000261726 ZNF804AQ7Z570 1209 aa16.1■□□□□ 0.17
CUX2-201ENST00000261726 HS2ST1Q7LGA3 356 aa16.1■□□□□ 0.17
CUX2-201ENST00000261726 MIGA1Q8NAN2 632 aa16.1■□□□□ 0.17
CUX2-201ENST00000261726 EPSTI1Q96J88 318 aa16.1■□□□□ 0.17
CUX2-201ENST00000261726 MTRF1LQ9UGC7 380 aaKnown RBP16.1■□□□□ 0.17
CUX2-201ENST00000261726 BICDL2A1A5D9 508 aa16.1■□□□□ 0.17
CUX2-201ENST00000261726 TRIM75PA6NK02 468 aa16.1■□□□□ 0.17
CUX2-201ENST00000261726 TTC36A6NLP5 189 aa16.1■□□□□ 0.17
CUX2-201ENST00000261726 STIM2Q9P246 746 aa16.1■□□□□ 0.17
CUX2-201ENST00000261726 JAG2Q9Y219 1238 aa16.09■□□□□ 0.17
CUX2-201ENST00000261726 CD109Q6YHK3 1445 aa16.09■□□□□ 0.17
CUX2-201ENST00000261726 ALDH3A1P30838 453 aa16.09■□□□□ 0.17
CUX2-201ENST00000261726 MAPKBP1O60336 1514 aa16.09■□□□□ 0.17
CUX2-201ENST00000261726 ZFYP08048 801 aaPredicted RBP16.09■□□□□ 0.17
CUX2-201ENST00000261726 SEPT14Q6ZU15 432 aa16.09■□□□□ 0.17
CUX2-201ENST00000261726 FAM200AQ8TCP9 573 aa16.09■□□□□ 0.17
CUX2-201ENST00000261726 RNF34Q969K3 372 aa16.09■□□□□ 0.17
CUX2-201ENST00000261726 E7EVH7 732 aa16.09■□□□□ 0.17
CUX2-201ENST00000261726 RIMBP2O15034 1052 aa16.09■□□□□ 0.17
CUX2-201ENST00000261726 IGHDP01880 384 aa16.09■□□□□ 0.17
CUX2-201ENST00000261726 RXRAP19793 462 aa16.09■□□□□ 0.17
CUX2-201ENST00000261726 KIFC2Q96AC6 838 aa16.09■□□□□ 0.17
CUX2-201ENST00000261726 ADGRL1O94910 1474 aa16.09■□□□□ 0.17
CUX2-201ENST00000261726 INF2Q27J81 1249 aa16.08■□□□□ 0.17
CUX2-201ENST00000261726 SEL1L2Q5TEA6 688 aa16.08■□□□□ 0.17
CUX2-201ENST00000261726 SPTLC2O15270 562 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms