RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 HMGB1P09429 215 aaKnown RBP10.29□□□□□ -0.76
CALCOCO2-201ENST00000258947 INTS4Q96HW7 963 aaKnown RBP10.29□□□□□ -0.76
CALCOCO2-201ENST00000258947 SLC4A4Q9Y6R1 1079 aa10.29□□□□□ -0.76
CALCOCO2-201ENST00000258947 FGAP02671 866 aa10.29□□□□□ -0.76
CALCOCO2-201ENST00000258947 TXNRD1Q16881 649 aa10.29□□□□□ -0.76
CALCOCO2-201ENST00000258947 DSCC1Q9BVC3 393 aa10.29□□□□□ -0.76
CALCOCO2-201ENST00000258947 LRRC4BQ9NT99 713 aa10.29□□□□□ -0.76
CALCOCO2-201ENST00000258947 WTIPA6NIX2 430 aaPredicted RBP10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 E7EWF7 191 aa10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 RXRBP28702 533 aa10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 RBM6P78332 1123 aaKnown RBP10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 DHX32Q7L7V1 743 aaKnown RBP10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 MINPP1Q9UNW1 487 aa10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 MED23Q9ULK4 1368 aa10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 A0A0G2JLW4 131 aa10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 AMIGO3Q86WK7 504 aa10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 DZIP1Q86YF9 867 aaKnown RBP10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 ANP32BQ92688 251 aaKnown RBP10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 AK9Q5TCS8 1911 aa10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 SERPINB2P05120 415 aa10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 PDCP20941 246 aa10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 HIBADHP31937 336 aaKnown RBP10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 GNL2Q13823 731 aaKnown RBP10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 NCOA7Q8NI08 942 aa10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 BCL2L12Q9HB09 334 aa10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 KIF3AQ9Y496 699 aa10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 SHANK3Q9BYB0 1731 aa10.28□□□□□ -0.76
CALCOCO2-201ENST00000258947 SYT1P21579 422 aa10.27□□□□□ -0.76
CALCOCO2-201ENST00000258947 ADD2P35612 726 aa10.27□□□□□ -0.76
CALCOCO2-201ENST00000258947 NAA16Q6N069 864 aaPredicted RBP10.27□□□□□ -0.76
CALCOCO2-201ENST00000258947 CCDC144CPQ8IYA2 1237 aa10.27□□□□□ -0.76
CALCOCO2-201ENST00000258947 NOL10Q9BSC4 688 aaKnown RBP10.27□□□□□ -0.76
CALCOCO2-201ENST00000258947 ANKRD2Q9GZV1 360 aa10.27□□□□□ -0.76
CALCOCO2-201ENST00000258947 BSDC1Q9NW68 430 aaPredicted RBP10.27□□□□□ -0.76
CALCOCO2-201ENST00000258947 GUCY1B3Q02153 619 aa10.27□□□□□ -0.77
CALCOCO2-201ENST00000258947 CEBPZQ03701 1054 aaKnown RBP10.27□□□□□ -0.77
CALCOCO2-201ENST00000258947 CHMP4CQ96CF2 233 aa10.27□□□□□ -0.77
CALCOCO2-201ENST00000258947 TTC14Q96N46 770 aa10.27□□□□□ -0.77
CALCOCO2-201ENST00000258947 GPR101Q96P66 508 aaPredicted RBP10.27□□□□□ -0.77
CALCOCO2-201ENST00000258947 ABCC12Q96J65 1359 aa10.27□□□□□ -0.77
CALCOCO2-201ENST00000258947 ERICH2A1L162 156 aa10.27□□□□□ -0.77
CALCOCO2-201ENST00000258947 PRC1O43663 620 aa10.27□□□□□ -0.77
CALCOCO2-201ENST00000258947 SYNE3Q6ZMZ3 975 aa10.27□□□□□ -0.77
CALCOCO2-201ENST00000258947 ZNF622Q969S3 477 aaKnown RBP eCLIP10.27□□□□□ -0.776e-8■■■□□ 14.6
CALCOCO2-201ENST00000258947 NCOA5Q9HCD5 579 aaKnown RBP10.27□□□□□ -0.77
CALCOCO2-201ENST00000258947 GOLGA8BA8MQT2 603 aa10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 MCM5P33992 734 aa10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 SF3B2Q13435 895 aaKnown RBP10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 CUL4AQ13619 759 aa10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 COL9A3Q14050 684 aaPredicted RBP10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 UBE4AQ14139 1066 aa10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 UBR2Q8IWV8 1755 aa10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 RIC1Q4ADV7 1423 aa10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 SF3B3Q15393 1217 aaKnown RBP10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 VGLL2Q8N8G2 317 aa10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 KLF18A0A0U1RQI7 1052 aa10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 B4E1Z4 1266 aa10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 UFL1O94874 794 aa10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 RXRAP19793 462 aa10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 MICU3Q86XE3 530 aa10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 DENND2AQ9ULE3 1009 aa10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 MTMR7Q9Y216 660 aa10.26□□□□□ -0.77
CALCOCO2-201ENST00000258947 ZNF804BA4D1E1 1349 aa10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 MAGEB6P1A0A0J9YX57 407 aa10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 RIMBP2O15034 1052 aa10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 PRKAB2O43741 272 aa10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 JAK2O60674 1132 aa10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 ZSCAN22P10073 491 aaPredicted RBP10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 CTDSPL2Q05D32 466 aa10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 UBE3CQ15386 1083 aa10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 L1TD1Q5T7N2 865 aaKnown RBP10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 CPLX2Q6PUV4 134 aaKnown RBP10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 CCDC82Q8N4S0 544 aa10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 SDR42E1Q8WUS8 393 aa10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 N4BP2Q86UW6 1770 aaPredicted RBP10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 CARMIL3Q8ND23 1372 aa10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 STOX1Q6ZVD7 989 aa10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 NUP133Q8WUM0 1156 aa10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 GLI3P10071 1580 aa10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 IFIT3O14879 490 aaKnown RBP10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 ARID4AP29374 1257 aaPredicted RBP10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 SART3Q15020 963 aaKnown RBP10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 MFSD6Q6ZSS7 791 aa10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 ZKSCAN3Q9BRR0 538 aa10.25□□□□□ -0.77
CALCOCO2-201ENST00000258947 KLRK1P26718 216 aa10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 SLC27A3Q5K4L6 730 aa10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 PRR5LQ6MZQ0 368 aa10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 FAM173BQ6P4H8 233 aa10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 GPHNQ9NQX3 736 aaPredicted RBP10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 AATFQ9NY61 560 aaKnown RBP eCLIP10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 CNPY2Q9Y2B0 182 aa10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 RFX7Q2KHR2 1363 aa10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 CCDC69A6NI79 296 aa10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 RANBP6O60518 1105 aaKnown RBP10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 FGFR2P21802 821 aa10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 KLHL34Q8N239 644 aa10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 RBM17Q96I25 401 aaKnown RBP10.24□□□□□ -0.77
CALCOCO2-201ENST00000258947 UBAC1Q9BSL1 405 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms