RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PCDHA7Q9UN72 937 aa17.82■□□□□ 0.44
DDX56-201ENST00000258772 TULP1O00294 542 aaPredicted RBP17.81■□□□□ 0.44
DDX56-201ENST00000258772 IL2RBP14784 551 aa17.81■□□□□ 0.44
DDX56-201ENST00000258772 SCARF1Q14162 830 aa17.81■□□□□ 0.44
DDX56-201ENST00000258772 MRFAP1L1Q96HT8 127 aa17.81■□□□□ 0.44
DDX56-201ENST00000258772 BCL2L12Q9HB09 334 aa17.81■□□□□ 0.44
DDX56-201ENST00000258772 ANO10Q9NW15 660 aa17.81■□□□□ 0.44
DDX56-201ENST00000258772 TNS2Q63HR2 1409 aa17.81■□□□□ 0.44
DDX56-201ENST00000258772 ADALQ6DHV7 355 aa17.81■□□□□ 0.44
DDX56-201ENST00000258772 PRC1O43663 620 aa17.8■□□□□ 0.44
DDX56-201ENST00000258772 ZAP70P43403 619 aa17.8■□□□□ 0.44
DDX56-201ENST00000258772 OTUD7BQ6GQQ9 843 aa17.8■□□□□ 0.44
DDX56-201ENST00000258772 MB21D2Q8IYB1 491 aaPredicted RBP17.8■□□□□ 0.44
DDX56-201ENST00000258772 APPBP2Q92624 585 aa17.8■□□□□ 0.44
DDX56-201ENST00000258772 FAM89AQ96GI7 184 aa17.8■□□□□ 0.44
DDX56-201ENST00000258772 CCDC85AQ96PX6 553 aaPredicted RBP17.8■□□□□ 0.44
DDX56-201ENST00000258772 ZMYND15Q9H091 742 aa17.8■□□□□ 0.44
DDX56-201ENST00000258772 PUS7LQ9H0K6 701 aaKnown RBP17.8■□□□□ 0.44
DDX56-201ENST00000258772 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.8■□□□□ 0.44
DDX56-201ENST00000258772 BECN2A8MW95 431 aa17.8■□□□□ 0.44
DDX56-201ENST00000258772 PCCAP05165 728 aaPredicted RBP17.8■□□□□ 0.44
DDX56-201ENST00000258772 CSF1RP07333 972 aa17.8■□□□□ 0.44
DDX56-201ENST00000258772 DHX40Q8IX18 779 aaKnown RBP17.8■□□□□ 0.44
DDX56-201ENST00000258772 FMR1NBQ8N0W7 255 aaPredicted RBP17.8■□□□□ 0.44
DDX56-201ENST00000258772 MRPS27Q92552 414 aaKnown RBP17.8■□□□□ 0.44
DDX56-201ENST00000258772 ARID3AQ99856 593 aa17.8■□□□□ 0.44
DDX56-201ENST00000258772 PLA2G12BQ9BX93 195 aa17.8■□□□□ 0.44
DDX56-201ENST00000258772 ZNF330Q9Y3S2 320 aaPredicted RBP17.8■□□□□ 0.44
DDX56-201ENST00000258772 A0A087WWV3 80 aa17.79■□□□□ 0.44
DDX56-201ENST00000258772 KLF18A0A0U1RQI7 1052 aa17.79■□□□□ 0.44
DDX56-201ENST00000258772 DHX16O60231 1041 aaKnown RBP17.79■□□□□ 0.44
DDX56-201ENST00000258772 TAF7LQ5H9L4 462 aa17.79■□□□□ 0.44
DDX56-201ENST00000258772 LINC00301Q8NCQ3 95 aa17.79■□□□□ 0.44
DDX56-201ENST00000258772 C8orf76Q96K31 380 aa17.79■□□□□ 0.44
DDX56-201ENST00000258772 CCDC94Q9BW85 323 aaPredicted RBP17.79■□□□□ 0.44
DDX56-201ENST00000258772 HPS5Q9UPZ3 1129 aa17.79■□□□□ 0.44
DDX56-201ENST00000258772 COL5A2P05997 1499 aaPredicted RBP17.79■□□□□ 0.44
DDX56-201ENST00000258772 A0A1W2PQ27 194 aa17.78■□□□□ 0.44
DDX56-201ENST00000258772 A0A1W2PQ64 194 aa17.78■□□□□ 0.44
DDX56-201ENST00000258772 A0A1W2PQD8 194 aa17.78■□□□□ 0.44
DDX56-201ENST00000258772 IFIT5Q13325 482 aaKnown RBP17.78■□□□□ 0.44
DDX56-201ENST00000258772 LRRC8AQ8IWT6 810 aa17.78■□□□□ 0.44
DDX56-201ENST00000258772 FBXO18Q8NFZ0 1043 aa17.78■□□□□ 0.44
DDX56-201ENST00000258772 NCOA7Q8NI08 942 aa17.78■□□□□ 0.44
DDX56-201ENST00000258772 CARD10Q9BWT7 1032 aa17.78■□□□□ 0.44
DDX56-201ENST00000258772 MYH7P12883 1935 aa17.78■□□□□ 0.44
DDX56-201ENST00000258772 CTIFO43310 598 aaKnown RBP17.78■□□□□ 0.44
DDX56-201ENST00000258772 ANTXR2P58335 489 aa17.78■□□□□ 0.44
DDX56-201ENST00000258772 BRINP3Q76B58 766 aa17.78■□□□□ 0.44
DDX56-201ENST00000258772 C16orf45Q96MC5 204 aaPredicted RBP17.78■□□□□ 0.44
DDX56-201ENST00000258772 ABCC12Q96J65 1359 aa17.78■□□□□ 0.44
DDX56-201ENST00000258772 A0A1B0GVL5 298 aa17.77■□□□□ 0.44
DDX56-201ENST00000258772 POLR3DP05423 398 aaPredicted RBP17.77■□□□□ 0.44
DDX56-201ENST00000258772 HSP90AB3PQ58FF7 597 aa17.77■□□□□ 0.44
DDX56-201ENST00000258772 PI16Q6UXB8 463 aa17.77■□□□□ 0.44
DDX56-201ENST00000258772 ZBTB38Q8NAP3 1195 aaPredicted RBP17.77■□□□□ 0.44
DDX56-201ENST00000258772 ERCC4Q92889 916 aaPredicted RBP17.77■□□□□ 0.44
DDX56-201ENST00000258772 SDF4Q9BRK5 362 aa17.77■□□□□ 0.44
DDX56-201ENST00000258772 ORC3Q9UBD5 711 aaPredicted RBP17.77■□□□□ 0.44
DDX56-201ENST00000258772 CLIC4Q9Y696 253 aa17.77■□□□□ 0.44
DDX56-201ENST00000258772 SHANK3Q9BYB0 1731 aa17.77■□□□□ 0.44
DDX56-201ENST00000258772 GOLGA8BA8MQT2 603 aa17.77■□□□□ 0.43
DDX56-201ENST00000258772 ZNF213O14771 459 aa17.77■□□□□ 0.43
DDX56-201ENST00000258772 GPAA1O43292 621 aa17.77■□□□□ 0.43
DDX56-201ENST00000258772 STK38Q15208 465 aa17.77■□□□□ 0.43
DDX56-201ENST00000258772 CEP57L1Q8IYX8 460 aa17.77■□□□□ 0.43
DDX56-201ENST00000258772 POLR3EQ9NVU0 708 aa17.77■□□□□ 0.43
DDX56-201ENST00000258772 NEMFO60524 1076 aa17.76■□□□□ 0.43
DDX56-201ENST00000258772 TNNT1P13805 278 aa17.76■□□□□ 0.43
DDX56-201ENST00000258772 NDUFA8P51970 172 aa17.76■□□□□ 0.43
DDX56-201ENST00000258772 SF3A1Q15459 793 aaKnown RBP17.76■□□□□ 0.43
DDX56-201ENST00000258772 RALYLQ86SE5 291 aaKnown RBP17.76■□□□□ 0.43
DDX56-201ENST00000258772 KCNG4Q8TDN1 519 aa17.76■□□□□ 0.43
DDX56-201ENST00000258772 YEATS4O95619 227 aa17.76■□□□□ 0.43
DDX56-201ENST00000258772 MYSM1Q5VVJ2 828 aa17.76■□□□□ 0.43
DDX56-201ENST00000258772 KIF6Q6ZMV9 814 aa17.76■□□□□ 0.43
DDX56-201ENST00000258772 BRAPQ7Z569 592 aa17.76■□□□□ 0.43
DDX56-201ENST00000258772 NAT10Q9H0A0 1025 aaKnown RBP17.76■□□□□ 0.43
DDX56-201ENST00000258772 TMOD3Q9NYL9 352 aa17.76■□□□□ 0.43
DDX56-201ENST00000258772 RIPOR2Q9Y4F9 1068 aa17.76■□□□□ 0.43
DDX56-201ENST00000258772 AKAP11Q9UKA4 1901 aa17.75■□□□□ 0.43
DDX56-201ENST00000258772 WDR19Q8NEZ3 1342 aa17.75■□□□□ 0.43
DDX56-201ENST00000258772 CPLX1O14810 134 aa17.75■□□□□ 0.43
DDX56-201ENST00000258772 RBM6P78332 1123 aaKnown RBP17.75■□□□□ 0.43
DDX56-201ENST00000258772 ATP2B3Q16720 1220 aa17.75■□□□□ 0.43
DDX56-201ENST00000258772 SPTLC2O15270 562 aa17.75■□□□□ 0.43
DDX56-201ENST00000258772 MCAMP43121 646 aa17.75■□□□□ 0.43
DDX56-201ENST00000258772 ARID5BQ14865 1188 aa17.75■□□□□ 0.43
DDX56-201ENST00000258772 TPD52L1Q16890 204 aaPredicted RBP17.75■□□□□ 0.43
DDX56-201ENST00000258772 RAB11FIP4Q86YS3 637 aa17.75■□□□□ 0.43
DDX56-201ENST00000258772 DNAJC10Q8IXB1 793 aa17.75■□□□□ 0.43
DDX56-201ENST00000258772 SYNE4Q8N205 404 aa17.75■□□□□ 0.43
DDX56-201ENST00000258772 AOPEPQ8N6M6 819 aa17.75■□□□□ 0.43
DDX56-201ENST00000258772 TEX13AQ9BXU3 409 aaPredicted RBP17.75■□□□□ 0.43
DDX56-201ENST00000258772 KIAA1468Q9P260 1216 aa17.75■□□□□ 0.43
DDX56-201ENST00000258772 DDX60Q8IY21 1712 aaKnown RBP17.75■□□□□ 0.43
DDX56-201ENST00000258772 SMTNL1A8MU46 457 aa17.74■□□□□ 0.43
DDX56-201ENST00000258772 METTL24Q5JXM2 366 aa17.74■□□□□ 0.43
DDX56-201ENST00000258772 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.74■□□□□ 0.432e-6■■■□□ 16
DDX56-201ENST00000258772 GJB4Q9NTQ9 266 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms