RNA–Protein interactions for RNA: ENST00000257818.2

LMO2-201, Transcript of LIM domain only 2, humanhuman

TSL 1 (best) BASIC

Gene LMO2, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-201ENST00000257818 CTNNA3Q9UI47 895 aa28.89■■■□□ 2.21
LMO2-201ENST00000257818 NRAPQ86VF7 1730 aa28.88■■■□□ 2.21
LMO2-201ENST00000257818 PTPDC1A2A3K4 754 aa28.88■■■□□ 2.21
LMO2-201ENST00000257818 ENGASEQ8NFI3 743 aa28.88■■■□□ 2.21
LMO2-201ENST00000257818 LRP6O75581 1613 aa28.88■■■□□ 2.21
LMO2-201ENST00000257818 FGD1P98174 961 aa28.87■■■□□ 2.21
LMO2-201ENST00000257818 APOBRQ0VD83 1088 aa28.87■■■□□ 2.21
LMO2-201ENST00000257818 TCIRG1Q13488 830 aa28.87■■■□□ 2.21
LMO2-201ENST00000257818 TOM1O60784 492 aa28.87■■■□□ 2.21
LMO2-201ENST00000257818 DDB1Q16531 1140 aa28.87■■■□□ 2.21
LMO2-201ENST00000257818 KIF6Q6ZMV9 814 aa28.87■■■□□ 2.21
LMO2-201ENST00000257818 DHX32Q7L7V1 743 aaKnown RBP28.87■■■□□ 2.21
LMO2-201ENST00000257818 ISCA1Q9BUE6 129 aa28.87■■■□□ 2.21
LMO2-201ENST00000257818 SLFNL1Q499Z3 407 aa28.86■■■□□ 2.21
LMO2-201ENST00000257818 A0A0G2JS52 829 aa28.86■■■□□ 2.21
LMO2-201ENST00000257818 SH3TC1Q8TE82 1336 aa28.85■■■□□ 2.21
LMO2-201ENST00000257818 NEMFO60524 1076 aa28.85■■■□□ 2.21
LMO2-201ENST00000257818 CYP19A1P11511 503 aaPredicted RBP28.85■■■□□ 2.21
LMO2-201ENST00000257818 NYAP1Q6ZVC0 841 aa28.85■■■□□ 2.21
LMO2-201ENST00000257818 ZNF592Q92610 1267 aa28.85■■■□□ 2.21
LMO2-201ENST00000257818 OGFRQ9NZT2 677 aa28.85■■■□□ 2.21
LMO2-201ENST00000257818 DOT1LQ8TEK3 1739 aa28.85■■■□□ 2.21
LMO2-201ENST00000257818 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.85■■■□□ 2.21
LMO2-201ENST00000257818 EXOSC10Q01780 885 aaKnown RBP28.85■■■□□ 2.21
LMO2-201ENST00000257818 CCDC73Q6ZRK6 1079 aa28.85■■■□□ 2.21
LMO2-201ENST00000257818 ILDR1Q86SU0 546 aaPredicted RBP28.85■■■□□ 2.21
LMO2-201ENST00000257818 KBTBD3Q8NAB2 608 aa28.85■■■□□ 2.21
LMO2-201ENST00000257818 CCDC9Q9Y3X0 531 aaKnown RBP28.85■■■□□ 2.21
LMO2-201ENST00000257818 SALL1Q9NSC2 1324 aa28.84■■■□□ 2.21
LMO2-201ENST00000257818 HMGB1P09429 215 aaKnown RBP28.84■■■□□ 2.21
LMO2-201ENST00000257818 SKILP12757 684 aa28.84■■■□□ 2.21
LMO2-201ENST00000257818 CCT2P78371 535 aaKnown RBP28.84■■■□□ 2.21
LMO2-201ENST00000257818 CCZ1BP86790 482 aa28.84■■■□□ 2.21
LMO2-201ENST00000257818 CCZ1P86791 482 aaPredicted RBP28.84■■■□□ 2.21
LMO2-201ENST00000257818 CDCA7Q9BWT1 371 aaPredicted RBP28.84■■■□□ 2.21
LMO2-201ENST00000257818 AGXT2Q9BYV1 514 aa28.84■■■□□ 2.21
LMO2-201ENST00000257818 THRAP3Q9Y2W1 955 aaKnown RBP28.84■■■□□ 2.21
LMO2-201ENST00000257818 A0A0G2JLW4 131 aa28.83■■■□□ 2.21
LMO2-201ENST00000257818 FAM160A1Q05DH4 1040 aa28.83■■■□□ 2.21
LMO2-201ENST00000257818 NCOA5Q9HCD5 579 aaKnown RBP28.83■■■□□ 2.21
LMO2-201ENST00000257818 CCDC69A6NI79 296 aa28.83■■■□□ 2.21
LMO2-201ENST00000257818 BECN2A8MW95 431 aa28.83■■■□□ 2.21
LMO2-201ENST00000257818 KINO60870 393 aaKnown RBP28.83■■■□□ 2.21
LMO2-201ENST00000257818 PPFIA3O75145 1194 aa28.83■■■□□ 2.21
LMO2-201ENST00000257818 ACSBG1Q96GR2 724 aa28.83■■■□□ 2.21
LMO2-201ENST00000257818 CGNQ9P2M7 1197 aaKnown RBP28.83■■■□□ 2.21
LMO2-201ENST00000257818 ERCC4Q92889 916 aaPredicted RBP28.82■■■□□ 2.2
LMO2-201ENST00000257818 ANO10Q9NW15 660 aa28.82■■■□□ 2.2
LMO2-201ENST00000257818 FILIP1Q7Z7B0 1213 aa28.82■■■□□ 2.2
LMO2-201ENST00000257818 ZBTB1Q9Y2K1 713 aa28.82■■■□□ 2.2
LMO2-201ENST00000257818 HLFQ16534 295 aa28.81■■■□□ 2.2
LMO2-201ENST00000257818 FSIP1Q8NA03 581 aa28.81■■■□□ 2.2
LMO2-201ENST00000257818 ZNF396Q96N95 335 aaPredicted RBP28.81■■■□□ 2.2
LMO2-201ENST00000257818 SPATA31A5Q5VU36 1347 aa28.81■■■□□ 2.2
LMO2-201ENST00000257818 SPATA31A7Q8IWB4 1347 aa28.81■■■□□ 2.2
LMO2-201ENST00000257818 GUCY1B3Q02153 619 aa28.81■■■□□ 2.2
LMO2-201ENST00000257818 ATL3Q6DD88 541 aa28.81■■■□□ 2.2
LMO2-201ENST00000257818 ZNF594Q96JF6 807 aaPredicted RBP28.81■■■□□ 2.2
LMO2-201ENST00000257818 MAP3K15Q6ZN16 1313 aa28.8■■■□□ 2.2
LMO2-201ENST00000257818 PTPN14Q15678 1187 aa28.8■■■□□ 2.2
LMO2-201ENST00000257818 MARCH10Q8NA82 808 aaPredicted RBP28.8■■■□□ 2.2
LMO2-201ENST00000257818 PALLDQ8WX93 1383 aa28.8■■■□□ 2.2
LMO2-201ENST00000257818 ME1P48163 572 aa28.8■■■□□ 2.2
LMO2-201ENST00000257818 ATG9AQ7Z3C6 839 aa28.8■■■□□ 2.2
LMO2-201ENST00000257818 AOPEPQ8N6M6 819 aa28.8■■■□□ 2.2
LMO2-201ENST00000257818 FAM89AQ96GI7 184 aa28.8■■■□□ 2.2
LMO2-201ENST00000257818 BCL11BQ9C0K0 894 aaPredicted RBP28.8■■■□□ 2.2
LMO2-201ENST00000257818 DDX41Q9UJV9 622 aaKnown RBP28.8■■■□□ 2.2
LMO2-201ENST00000257818 DSCC1Q9BVC3 393 aa28.79■■■□□ 2.2
LMO2-201ENST00000257818 KIF20AO95235 890 aa28.78■■■□□ 2.2
LMO2-201ENST00000257818 TRIM28Q13263 835 aaKnown RBP28.78■■■□□ 2.2
LMO2-201ENST00000257818 E7EWF7 191 aa28.78■■■□□ 2.2
LMO2-201ENST00000257818 GOLIM4O00461 696 aa28.78■■■□□ 2.2
LMO2-201ENST00000257818 GIGYF2Q6Y7W6 1299 aaKnown RBP28.78■■■□□ 2.2
LMO2-201ENST00000257818 HELLSQ9NRZ9 838 aa28.78■■■□□ 2.2
LMO2-201ENST00000257818 ZNF215Q9UL58 517 aaPredicted RBP28.78■■■□□ 2.2
LMO2-201ENST00000257818 IGSF3O75054 1194 aa28.77■■■□□ 2.2
LMO2-201ENST00000257818 GPTP24298 496 aa28.77■■■□□ 2.2
LMO2-201ENST00000257818 PDIA3P30101 505 aaKnown RBP28.77■■■□□ 2.2
LMO2-201ENST00000257818 CEP57L1Q8IYX8 460 aa28.77■■■□□ 2.2
LMO2-201ENST00000257818 FMR1NBQ8N0W7 255 aaPredicted RBP28.77■■■□□ 2.2
LMO2-201ENST00000257818 CCAR2Q8N163 923 aaKnown RBP28.77■■■□□ 2.2
LMO2-201ENST00000257818 TRMT1Q9NXH9 659 aaKnown RBP28.77■■■□□ 2.2
LMO2-201ENST00000257818 NBPF11Q86T75 865 aa28.77■■■□□ 2.2
LMO2-201ENST00000257818 PCDHA7Q9UN72 937 aa28.77■■■□□ 2.2
LMO2-201ENST00000257818 LRRC24Q50LG9 513 aa28.76■■■□□ 2.19
LMO2-201ENST00000257818 CHST3Q7LGC8 479 aa28.76■■■□□ 2.19
LMO2-201ENST00000257818 FBXW7Q969H0 707 aa28.76■■■□□ 2.19
LMO2-201ENST00000257818 PAG1Q9NWQ8 432 aa28.76■■■□□ 2.19
LMO2-201ENST00000257818 SYNE4Q8N205 404 aa28.76■■■□□ 2.19
LMO2-201ENST00000257818 CCDC85AQ96PX6 553 aaPredicted RBP28.76■■■□□ 2.19
LMO2-201ENST00000257818 NAP1L2Q9ULW6 460 aaPredicted RBP28.76■■■□□ 2.19
LMO2-201ENST00000257818 SLIT2O94813 1529 aa28.76■■■□□ 2.19
LMO2-201ENST00000257818 CARMIL3Q8ND23 1372 aa28.75■■■□□ 2.19
LMO2-201ENST00000257818 UBAP1LF5GYI3 381 aa28.75■■■□□ 2.19
LMO2-201ENST00000257818 HSPD1P10809 573 aaKnown RBP28.75■■■□□ 2.19
LMO2-201ENST00000257818 FDPSP14324 419 aaKnown RBP28.75■■■□□ 2.19
LMO2-201ENST00000257818 ZMYM1Q5SVZ6 1142 aa28.75■■■□□ 2.19
LMO2-201ENST00000257818 KIF18AQ8NI77 898 aa28.75■■■□□ 2.19
LMO2-201ENST00000257818 KCND1Q9NSA2 647 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms