RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 LRRC8AQ8IWT6 810 aa15.72■□□□□ 0.11
VHL-201ENST00000256474 ZCRB1Q8TBF4 217 aaKnown RBP15.72■□□□□ 0.11
VHL-201ENST00000256474 KDM6AO15550 1401 aaPredicted RBP15.72■□□□□ 0.11
VHL-201ENST00000256474 PDILTQ8N807 584 aa15.71■□□□□ 0.11
VHL-201ENST00000256474 B4E1Z4 1266 aa15.71■□□□□ 0.11
VHL-201ENST00000256474 SPTLC2O15270 562 aa15.71■□□□□ 0.11
VHL-201ENST00000256474 SERPINC1P01008 464 aa15.71■□□□□ 0.11
VHL-201ENST00000256474 ZNF771Q7L3S4 317 aaPredicted RBP15.71■□□□□ 0.11
VHL-201ENST00000256474 PLA2G4DQ86XP0 818 aa15.71■□□□□ 0.11
VHL-201ENST00000256474 NAT10Q9H0A0 1025 aaKnown RBP15.71■□□□□ 0.11
VHL-201ENST00000256474 HSPA2P54652 639 aa15.71■□□□□ 0.11
VHL-201ENST00000256474 SRCAPQ6ZRS2 3230 aa15.71■□□□□ 0.1
VHL-201ENST00000256474 GPAA1O43292 621 aa15.7■□□□□ 0.1
VHL-201ENST00000256474 XPO4Q9C0E2 1151 aaKnown RBP15.7■□□□□ 0.1
VHL-201ENST00000256474 HELLSQ9NRZ9 838 aa15.7■□□□□ 0.1
VHL-201ENST00000256474 RCOR1Q9UKL0 485 aa15.7■□□□□ 0.1
VHL-201ENST00000256474 CARMIL3Q8ND23 1372 aa15.7■□□□□ 0.1
VHL-201ENST00000256474 ZNF215Q9UL58 517 aaPredicted RBP15.7■□□□□ 0.1
VHL-201ENST00000256474 FDPSP14324 419 aaKnown RBP15.7■□□□□ 0.1
VHL-201ENST00000256474 IQCB1Q15051 598 aa15.7■□□□□ 0.1
VHL-201ENST00000256474 CLIC6Q96NY7 704 aa15.7■□□□□ 0.1
VHL-201ENST00000256474 CFAP100Q494V2 611 aa15.69■□□□□ 0.1
VHL-201ENST00000256474 DNAJC10Q8IXB1 793 aa15.69■□□□□ 0.1
VHL-201ENST00000256474 TBC1D2BQ9UPU7 963 aa15.69■□□□□ 0.1
VHL-201ENST00000256474 NAA16Q6N069 864 aaPredicted RBP15.69■□□□□ 0.1
VHL-201ENST00000256474 NUP133Q8WUM0 1156 aa15.69■□□□□ 0.1
VHL-201ENST00000256474 ALG1Q9BT22 464 aa15.69■□□□□ 0.1
VHL-201ENST00000256474 LTN1O94822 1766 aa15.69■□□□□ 0.1
VHL-201ENST00000256474 ARHGAP23Q9P227 1491 aa15.69■□□□□ 0.1
VHL-201ENST00000256474 NCBP1Q09161 790 aaKnown RBP15.69■□□□□ 0.1
VHL-201ENST00000256474 SNW1Q13573 536 aaKnown RBP15.69■□□□□ 0.1
VHL-201ENST00000256474 RABL6Q3YEC7 729 aaPredicted RBP15.69■□□□□ 0.1
VHL-201ENST00000256474 CCAR2Q8N163 923 aaKnown RBP15.69■□□□□ 0.1
VHL-201ENST00000256474 SMARCC2Q8TAQ2 1214 aa15.69■□□□□ 0.1
VHL-201ENST00000256474 MEGF6O75095 1541 aa15.69■□□□□ 0.1
VHL-201ENST00000256474 TSGA10IPQ3SY00 556 aa15.68■□□□□ 0.1
VHL-201ENST00000256474 SYT10Q6XYQ8 523 aa15.68■□□□□ 0.1
VHL-201ENST00000256474 NCOA7Q8NI08 942 aa15.68■□□□□ 0.1
VHL-201ENST00000256474 DSCC1Q9BVC3 393 aa15.68■□□□□ 0.1
VHL-201ENST00000256474 SENP2Q9HC62 589 aa15.68■□□□□ 0.1
VHL-201ENST00000256474 CTNNA3Q9UI47 895 aa15.68■□□□□ 0.1
VHL-201ENST00000256474 ADGRL3Q9HAR2 1447 aa15.68■□□□□ 0.1
VHL-201ENST00000256474 KIF28PB7ZC32 967 aa15.68■□□□□ 0.1
VHL-201ENST00000256474 H7C1W4 665 aa15.68■□□□□ 0.1
VHL-201ENST00000256474 ATP1A3P13637 1013 aa15.68■□□□□ 0.1
VHL-201ENST00000256474 ILDR1Q86SU0 546 aaPredicted RBP15.68■□□□□ 0.1
VHL-201ENST00000256474 CTAGE5O15320 804 aa15.68■□□□□ 0.1
VHL-201ENST00000256474 ZNF202O95125 648 aa15.68■□□□□ 0.1
VHL-201ENST00000256474 PDIA4P13667 645 aaKnown RBP15.68■□□□□ 0.1
VHL-201ENST00000256474 TPM4P67936 248 aa15.68■□□□□ 0.1
VHL-201ENST00000256474 MAPK8IP2Q13387 824 aaPredicted RBP15.68■□□□□ 0.1
VHL-201ENST00000256474 KIF6Q6ZMV9 814 aa15.68■□□□□ 0.1
VHL-201ENST00000256474 SFPQP23246 707 aaKnown RBP eCLIP15.67■□□□□ 0.1
VHL-201ENST00000256474 METAP2P50579 478 aaKnown RBP eCLIP15.67■□□□□ 0.1
VHL-201ENST00000256474 EXOSC10Q01780 885 aaKnown RBP15.67■□□□□ 0.1
VHL-201ENST00000256474 TRIM29Q14134 588 aa15.67■□□□□ 0.1
VHL-201ENST00000256474 ELF2Q15723 593 aa15.67■□□□□ 0.1
VHL-201ENST00000256474 SLC26A6Q9BXS9 759 aa15.67■□□□□ 0.1
VHL-201ENST00000256474 ASAP1Q9ULH1 1129 aa15.67■□□□□ 0.1
VHL-201ENST00000256474 SMTNL1A8MU46 457 aa15.67■□□□□ 0.1
VHL-201ENST00000256474 DHX16O60231 1041 aaKnown RBP15.67■□□□□ 0.1
VHL-201ENST00000256474 DHX40Q8IX18 779 aaKnown RBP15.67■□□□□ 0.1
VHL-201ENST00000256474 LLPHQ9BRT6 129 aaKnown RBP15.67■□□□□ 0.1
VHL-201ENST00000256474 HEG1Q9ULI3 1381 aa15.67■□□□□ 0.1
VHL-201ENST00000256474 MYSM1Q5VVJ2 828 aa15.67■□□□□ 0.1
VHL-201ENST00000256474 TMOD3Q9NYL9 352 aa15.67■□□□□ 0.1
VHL-201ENST00000256474 TRMT112Q9UI30 125 aaKnown RBP15.67■□□□□ 0.1
VHL-201ENST00000256474 SLIT1O75093 1534 aa15.67■□□□□ 0.1
VHL-201ENST00000256474 hCG_1642624A0A1W2PR95 340 aa15.66■□□□□ 0.1
VHL-201ENST00000256474 CDK11BP21127 795 aaKnown RBP15.66■□□□□ 0.1
VHL-201ENST00000256474 PNOCQ13519 176 aa15.66■□□□□ 0.1
VHL-201ENST00000256474 CTDSPL2Q05D32 466 aa15.66■□□□□ 0.1
VHL-201ENST00000256474 SLC4A8Q2Y0W8 1093 aa15.66■□□□□ 0.1
VHL-201ENST00000256474 LRP10Q7Z4F1 713 aa15.66■□□□□ 0.1
VHL-201ENST00000256474 AIDAQ96BJ3 306 aa15.66■□□□□ 0.1
VHL-201ENST00000256474 GREM2Q9H772 168 aa15.66■□□□□ 0.1
VHL-201ENST00000256474 NFAT5O94916 1531 aa15.66■□□□□ 0.1
VHL-201ENST00000256474 SH3TC1Q8TE82 1336 aa15.66■□□□□ 0.1
VHL-201ENST00000256474 LRRC37A3O60309 1634 aa15.66■□□□□ 0.1
VHL-201ENST00000256474 NRDCO43847 1150 aa15.66■□□□□ 0.1
VHL-201ENST00000256474 PFKFB1P16118 471 aa15.66■□□□□ 0.1
VHL-201ENST00000256474 SYKP43405 635 aa15.66■□□□□ 0.1
VHL-201ENST00000256474 CASP7P55210 303 aa15.66■□□□□ 0.1
VHL-201ENST00000256474 LINC00301Q8NCQ3 95 aa15.66■□□□□ 0.1
VHL-201ENST00000256474 ZNF827Q17R98 1081 aa15.65■□□□□ 0.1
VHL-201ENST00000256474 NKX2-3Q8TAU0 364 aa15.65■□□□□ 0.1
VHL-201ENST00000256474 KIAA1468Q9P260 1216 aa15.65■□□□□ 0.1
VHL-201ENST00000256474 ITGA6P23229 1130 aa15.65■□□□□ 0.1
VHL-201ENST00000256474 CPLX2Q6PUV4 134 aaKnown RBP15.65■□□□□ 0.1
VHL-201ENST00000256474 MIGA1Q8NAN2 632 aa15.65■□□□□ 0.1
VHL-201ENST00000256474 NCAPD2Q15021 1401 aa15.65■□□□□ 0.1
VHL-201ENST00000256474 LRRFIP1Q32MZ4 808 aaKnown RBP15.65■□□□□ 0.1
VHL-201ENST00000256474 ANO1Q5XXA6 986 aa15.65■□□□□ 0.1
VHL-201ENST00000256474 CCDC191Q8NCU4 936 aa15.65■□□□□ 0.1
VHL-201ENST00000256474 FBXO18Q8NFZ0 1043 aa15.65■□□□□ 0.1
VHL-201ENST00000256474 KCNJ14Q9UNX9 436 aa15.65■□□□□ 0.1
VHL-201ENST00000256474 GOLGA8AA7E2F4 631 aa15.64■□□□□ 0.09
VHL-201ENST00000256474 TMEM67Q5HYA8 995 aa15.64■□□□□ 0.09
VHL-201ENST00000256474 KLHL10Q6JEL2 608 aa15.64■□□□□ 0.09
VHL-201ENST00000256474 KIF18AQ8NI77 898 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms