RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 APOBRQ0VD83 1088 aa20.82■□□□□ 0.92
EFR3A-201ENST00000254624 SHROOM2Q13796 1616 aa20.82■□□□□ 0.92
EFR3A-201ENST00000254624 MCM3P25205 808 aa20.82■□□□□ 0.92
EFR3A-201ENST00000254624 SPAG1Q07617 926 aa20.82■□□□□ 0.92
EFR3A-201ENST00000254624 TMC6Q7Z403 805 aa20.82■□□□□ 0.92
EFR3A-201ENST00000254624 SUCLG2Q96I99 432 aa20.82■□□□□ 0.92
EFR3A-201ENST00000254624 SUPT20HQ8NEM7 779 aa20.82■□□□□ 0.92
EFR3A-201ENST00000254624 CNPY2Q9Y2B0 182 aa20.82■□□□□ 0.92
EFR3A-201ENST00000254624 CCDC172P0C7W6 258 aa20.82■□□□□ 0.92
EFR3A-201ENST00000254624 APPBP2Q92624 585 aa20.82■□□□□ 0.92
EFR3A-201ENST00000254624 CLEC11AQ9Y240 323 aa20.82■□□□□ 0.92
EFR3A-201ENST00000254624 ERBB4Q15303 1308 aa20.82■□□□□ 0.92
EFR3A-201ENST00000254624 LMOD1P29536 600 aaPredicted RBP20.81■□□□□ 0.92
EFR3A-201ENST00000254624 TIMM10P62072 90 aa20.81■□□□□ 0.92
EFR3A-201ENST00000254624 KIF4BQ2VIQ3 1234 aa20.81■□□□□ 0.92
EFR3A-201ENST00000254624 RRAGBQ5VZM2 374 aa20.81■□□□□ 0.92
EFR3A-201ENST00000254624 TMEM87BQ96K49 555 aa20.81■□□□□ 0.92
EFR3A-201ENST00000254624 TMEM94Q12767 1356 aa20.81■□□□□ 0.92
EFR3A-201ENST00000254624 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.81■□□□□ 0.92
EFR3A-201ENST00000254624 METP08581 1390 aa20.81■□□□□ 0.92
EFR3A-201ENST00000254624 CCDC174Q6PII3 467 aa20.81■□□□□ 0.92
EFR3A-201ENST00000254624 CPLX3Q8WVH0 158 aa20.81■□□□□ 0.92
EFR3A-201ENST00000254624 UQCRHLA0A096LP55 91 aa20.81■□□□□ 0.92
EFR3A-201ENST00000254624 UQCRHP07919 91 aa20.81■□□□□ 0.92
EFR3A-201ENST00000254624 ALS2CR12Q96Q35 445 aa20.81■□□□□ 0.92
EFR3A-201ENST00000254624 SPTLC2O15270 562 aa20.8■□□□□ 0.92
EFR3A-201ENST00000254624 GBP2P32456 591 aaPredicted RBP20.8■□□□□ 0.92
EFR3A-201ENST00000254624 ATL3Q6DD88 541 aa20.8■□□□□ 0.92
EFR3A-201ENST00000254624 PTPDC1A2A3K4 754 aa20.8■□□□□ 0.92
EFR3A-201ENST00000254624 USP48Q86UV5 1035 aa20.8■□□□□ 0.92
EFR3A-201ENST00000254624 DBNDD2Q9BQY9 259 aa20.8■□□□□ 0.92
EFR3A-201ENST00000254624 LRSAM1Q6UWE0 723 aa20.8■□□□□ 0.92
EFR3A-201ENST00000254624 ERVK-7P63135 1459 aa20.8■□□□□ 0.92
EFR3A-201ENST00000254624 PARP1P09874 1014 aaKnown RBP20.8■□□□□ 0.92
EFR3A-201ENST00000254624 ZSCAN23Q3MJ62 389 aa20.8■□□□□ 0.92
EFR3A-201ENST00000254624 BICD1Q96G01 975 aa20.79■□□□□ 0.92
EFR3A-201ENST00000254624 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.79■□□□□ 0.923e-6■■■□□ 15.8
EFR3A-201ENST00000254624 H0YIN7 160 aa20.79■□□□□ 0.92
EFR3A-201ENST00000254624 PAFAH1B1P43034 410 aa20.79■□□□□ 0.92
EFR3A-201ENST00000254624 CFAP65Q6ZU64 1925 aaKnown RBP20.79■□□□□ 0.92
EFR3A-201ENST00000254624 TCIRG1Q13488 830 aa20.79■□□□□ 0.92
EFR3A-201ENST00000254624 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.79■□□□□ 0.921e-7■■■□□ 15.2
EFR3A-201ENST00000254624 KRT79Q5XKE5 535 aa20.79■□□□□ 0.92
EFR3A-201ENST00000254624 SPATA31E1Q6ZUB1 1445 aa20.79■□□□□ 0.92
EFR3A-201ENST00000254624 H0YHG0 523 aa20.79■□□□□ 0.92
EFR3A-201ENST00000254624 ADCY5O95622 1261 aa20.79■□□□□ 0.92
EFR3A-201ENST00000254624 N4BP3O15049 544 aa20.78■□□□□ 0.92
EFR3A-201ENST00000254624 MYCNP04198 464 aaPredicted RBP20.78■□□□□ 0.92
EFR3A-201ENST00000254624 MAP9Q49MG5 647 aa20.78■□□□□ 0.92
EFR3A-201ENST00000254624 RBM26Q5T8P6 1007 aaKnown RBP20.78■□□□□ 0.92
EFR3A-201ENST00000254624 KDM5CP41229 1560 aa20.78■□□□□ 0.92
EFR3A-201ENST00000254624 PSMA7O14818 248 aa20.78■□□□□ 0.92
EFR3A-201ENST00000254624 FERMT2Q96AC1 680 aa20.78■□□□□ 0.92
EFR3A-201ENST00000254624 CLASP1Q7Z460 1538 aa20.78■□□□□ 0.92
EFR3A-201ENST00000254624 GIGYF1O75420 1035 aaPredicted RBP20.77■□□□□ 0.92
EFR3A-201ENST00000254624 AFMP43652 599 aa20.77■□□□□ 0.92
EFR3A-201ENST00000254624 FBXO3Q9UK99 471 aa20.77■□□□□ 0.92
EFR3A-201ENST00000254624 KDRP35968 1356 aa20.77■□□□□ 0.92
EFR3A-201ENST00000254624 SYNMO15061 1565 aa20.77■□□□□ 0.92
EFR3A-201ENST00000254624 RPS6KB1P23443 525 aa20.77■□□□□ 0.92
EFR3A-201ENST00000254624 ENOX2Q16206 610 aaKnown RBP20.77■□□□□ 0.92
EFR3A-201ENST00000254624 CHST3Q7LGC8 479 aa20.77■□□□□ 0.92
EFR3A-201ENST00000254624 DPP8Q6V1X1 898 aaPredicted RBP20.77■□□□□ 0.91
EFR3A-201ENST00000254624 PDCL2Q8N4E4 241 aa20.77■□□□□ 0.91
EFR3A-201ENST00000254624 NEURL1BA8MQ27 555 aa20.76■□□□□ 0.91
EFR3A-201ENST00000254624 KBTBD3Q8NAB2 608 aa20.76■□□□□ 0.91
EFR3A-201ENST00000254624 FLAD1Q8NFF5 587 aa20.76■□□□□ 0.91
EFR3A-201ENST00000254624 CENPHQ9H3R5 247 aa20.76■□□□□ 0.91
EFR3A-201ENST00000254624 DNM1Q05193 864 aaKnown RBP20.76■□□□□ 0.91
EFR3A-201ENST00000254624 GIMAP6Q6P9H5 292 aa20.76■□□□□ 0.91
EFR3A-201ENST00000254624 TRMT1LQ7Z2T5 733 aaKnown RBP20.76■□□□□ 0.91
EFR3A-201ENST00000254624 ZNF594Q96JF6 807 aaPredicted RBP20.76■□□□□ 0.91
EFR3A-201ENST00000254624 CCDC66A2RUB6 948 aa20.75■□□□□ 0.91
EFR3A-201ENST00000254624 URI1O94763 535 aaPredicted RBP20.75■□□□□ 0.91
EFR3A-201ENST00000254624 KRT13P13646 458 aa20.75■□□□□ 0.91
EFR3A-201ENST00000254624 MARCKSP29966 332 aaPredicted RBP20.75■□□□□ 0.91
EFR3A-201ENST00000254624 ALDH1B1P30837 517 aa20.75■□□□□ 0.91
EFR3A-201ENST00000254624 ASIC1P78348 528 aa20.75■□□□□ 0.91
EFR3A-201ENST00000254624 ISM2Q6H9L7 571 aa20.75■□□□□ 0.91
EFR3A-201ENST00000254624 LUZP1Q86V48 1076 aa20.75■□□□□ 0.91
EFR3A-201ENST00000254624 KIF1BO60333 1816 aa20.75■□□□□ 0.91
EFR3A-201ENST00000254624 IFI16Q16666 785 aaKnown RBP20.75■□□□□ 0.91
EFR3A-201ENST00000254624 EHBP1Q8NDI1 1231 aa20.75■□□□□ 0.91
EFR3A-201ENST00000254624 HOOK2Q96ED9 719 aa20.75■□□□□ 0.91
EFR3A-201ENST00000254624 USP8P40818 1118 aa20.75■□□□□ 0.91
EFR3A-201ENST00000254624 IL17REQ8NFR9 667 aa20.75■□□□□ 0.91
EFR3A-201ENST00000254624 ARMT1Q9H993 441 aa20.75■□□□□ 0.91
EFR3A-201ENST00000254624 JAG2Q9Y219 1238 aa20.75■□□□□ 0.91
EFR3A-201ENST00000254624 SLC27A2O14975 620 aa20.74■□□□□ 0.91
EFR3A-201ENST00000254624 PDE6BP35913 854 aa20.74■□□□□ 0.91
EFR3A-201ENST00000254624 TBC1D5Q92609 795 aa20.74■□□□□ 0.91
EFR3A-201ENST00000254624 TBC1D22AQ8WUA7 517 aa20.74■□□□□ 0.91
EFR3A-201ENST00000254624 FAM200AQ8TCP9 573 aa20.74■□□□□ 0.91
EFR3A-201ENST00000254624 LLPHQ9BRT6 129 aaKnown RBP20.74■□□□□ 0.91
EFR3A-201ENST00000254624 CRACR2AQ9BSW2 395 aa20.74■□□□□ 0.91
EFR3A-201ENST00000254624 VSIG10Q8N0Z9 540 aa20.74■□□□□ 0.91
EFR3A-201ENST00000254624 SPATA5Q8NB90 893 aa20.74■□□□□ 0.91
EFR3A-201ENST00000254624 KLHDC4Q8TBB5 520 aa20.74■□□□□ 0.91
EFR3A-201ENST00000254624 DACT1Q9NYF0 836 aa20.74■□□□□ 0.91
EFR3A-201ENST00000254624 TMCO3Q6UWJ1 677 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms