RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 ZSCAN25Q6NSZ9 544 aa25.57■■□□□ 1.68
CLN6-201ENST00000249806 NTSR2O95665 410 aa25.56■■□□□ 1.68
CLN6-201ENST00000249806 FOSBP53539 338 aa25.56■■□□□ 1.68
CLN6-201ENST00000249806 PDLIM2Q96JY6 352 aa25.56■■□□□ 1.68
CLN6-201ENST00000249806 ZNF532Q9HCE3 1301 aa25.56■■□□□ 1.68
CLN6-201ENST00000249806 PTPDC1A2A3K4 754 aa25.56■■□□□ 1.68
CLN6-201ENST00000249806 ZNF274Q96GC6 653 aaPredicted RBP25.56■■□□□ 1.68
CLN6-201ENST00000249806 WWC3Q9ULE0 1092 aa25.56■■□□□ 1.68
CLN6-201ENST00000249806 ZNF213O14771 459 aa25.55■■□□□ 1.68
CLN6-201ENST00000249806 UQCRFS1P1P0C7P4 283 aa25.55■■□□□ 1.68
CLN6-201ENST00000249806 LRP5O75197 1615 aa25.55■■□□□ 1.68
CLN6-201ENST00000249806 RESTQ13127 1097 aa25.55■■□□□ 1.68
CLN6-201ENST00000249806 CCDC152Q4G0S7 254 aa25.55■■□□□ 1.68
CLN6-201ENST00000249806 GIMAP6Q6P9H5 292 aa25.55■■□□□ 1.68
CLN6-201ENST00000249806 ELP1O95163 1332 aa25.54■■□□□ 1.68
CLN6-201ENST00000249806 LETM1O95202 739 aaPredicted RBP25.54■■□□□ 1.68
CLN6-201ENST00000249806 SLC5A1P13866 664 aa25.54■■□□□ 1.68
CLN6-201ENST00000249806 CLCN1P35523 988 aa25.54■■□□□ 1.68
CLN6-201ENST00000249806 SPATA32Q96LK8 384 aa25.54■■□□□ 1.68
CLN6-201ENST00000249806 SCAND2PQ9GZW5 306 aaPredicted RBP25.54■■□□□ 1.68
CLN6-201ENST00000249806 DDX60Q8IY21 1712 aaKnown RBP25.54■■□□□ 1.68
CLN6-201ENST00000249806 RREB1Q92766 1687 aa25.54■■□□□ 1.68
CLN6-201ENST00000249806 PDE6AP16499 860 aa25.53■■□□□ 1.68
CLN6-201ENST00000249806 UBE3CQ15386 1083 aa25.53■■□□□ 1.68
CLN6-201ENST00000249806 MB21D2Q8IYB1 491 aaPredicted RBP25.53■■□□□ 1.68
CLN6-201ENST00000249806 SPATA5Q8NB90 893 aa25.53■■□□□ 1.68
CLN6-201ENST00000249806 SMARCC1Q92922 1105 aaPredicted RBP25.53■■□□□ 1.68
CLN6-201ENST00000249806 PRC1O43663 620 aa25.53■■□□□ 1.68
CLN6-201ENST00000249806 TOM1O60784 492 aa25.53■■□□□ 1.68
CLN6-201ENST00000249806 FBXL16Q8N461 479 aa25.53■■□□□ 1.68
CLN6-201ENST00000249806 LEO1Q8WVC0 666 aaPredicted RBP25.53■■□□□ 1.68
CLN6-201ENST00000249806 MCM5P33992 734 aa25.52■■□□□ 1.68
CLN6-201ENST00000249806 RASGRF1Q13972 1273 aa25.52■■□□□ 1.68
CLN6-201ENST00000249806 DENND2AQ9ULE3 1009 aa25.52■■□□□ 1.68
CLN6-201ENST00000249806 TCRBV5S4A2TA0A5A2 114 aa25.52■■□□□ 1.68
CLN6-201ENST00000249806 APPP05067 770 aa25.52■■□□□ 1.68
CLN6-201ENST00000249806 LIG1P18858 919 aa25.52■■□□□ 1.68
CLN6-201ENST00000249806 ANTXR2P58335 489 aa25.52■■□□□ 1.68
CLN6-201ENST00000249806 LINC00116Q8NCU8 138 aa25.52■■□□□ 1.68
CLN6-201ENST00000249806 NCOA7Q8NI08 942 aa25.52■■□□□ 1.68
CLN6-201ENST00000249806 NBPF3Q9H094 633 aa25.52■■□□□ 1.68
CLN6-201ENST00000249806 EVCP57679 992 aa25.51■■□□□ 1.67
CLN6-201ENST00000249806 HMGN5P82970 282 aaKnown RBP25.51■■□□□ 1.67
CLN6-201ENST00000249806 SMIM5Q71RC9 77 aa25.51■■□□□ 1.67
CLN6-201ENST00000249806 C8orf37Q96NL8 207 aa25.51■■□□□ 1.67
CLN6-201ENST00000249806 SALL1Q9NSC2 1324 aa25.51■■□□□ 1.67
CLN6-201ENST00000249806 IGHMBP2P38935 993 aaKnown RBP25.51■■□□□ 1.67
CLN6-201ENST00000249806 PTF1AQ7RTS3 328 aa25.51■■□□□ 1.67
CLN6-201ENST00000249806 NKX2-3Q8TAU0 364 aa25.51■■□□□ 1.67
CLN6-201ENST00000249806 BCAMP50895 628 aa25.5■■□□□ 1.67
CLN6-201ENST00000249806 RALYLQ86SE5 291 aaKnown RBP25.5■■□□□ 1.67
CLN6-201ENST00000249806 ZSCAN16Q9H4T2 348 aaPredicted RBP25.5■■□□□ 1.67
CLN6-201ENST00000249806 ATRNO75882 1429 aa25.5■■□□□ 1.67
CLN6-201ENST00000249806 NGLY1Q96IV0 654 aa25.49■■□□□ 1.67
CLN6-201ENST00000249806 ARAP2Q8WZ64 1704 aa25.49■■□□□ 1.67
CLN6-201ENST00000249806 FUCA2Q9BTY2 467 aa25.49■■□□□ 1.67
CLN6-201ENST00000249806 GOLGA6L4A6NEF3 574 aa25.48■■□□□ 1.67
CLN6-201ENST00000249806 FDPSP14324 419 aaKnown RBP25.48■■□□□ 1.67
CLN6-201ENST00000249806 GUCY1B3Q02153 619 aa25.48■■□□□ 1.67
CLN6-201ENST00000249806 NAA16Q6N069 864 aaPredicted RBP25.48■■□□□ 1.67
CLN6-201ENST00000249806 RAB11FIP4Q86YS3 637 aa25.48■■□□□ 1.67
CLN6-201ENST00000249806 MAGEB6Q8N7X4 407 aa25.48■■□□□ 1.67
CLN6-201ENST00000249806 ZNF652Q9Y2D9 606 aa25.48■■□□□ 1.67
CLN6-201ENST00000249806 KLF18A0A0U1RQI7 1052 aa25.48■■□□□ 1.67
CLN6-201ENST00000249806 CHRNDQ07001 517 aa25.48■■□□□ 1.67
CLN6-201ENST00000249806 TBC1D10CQ8IV04 446 aa25.48■■□□□ 1.67
CLN6-201ENST00000249806 AIDAQ96BJ3 306 aa25.48■■□□□ 1.67
CLN6-201ENST00000249806 PGBD1Q96JS3 809 aa25.48■■□□□ 1.67
CLN6-201ENST00000249806 STRBPQ96SI9 672 aaKnown RBP25.48■■□□□ 1.67
CLN6-201ENST00000249806 COL4A1P02462 1669 aa25.47■■□□□ 1.67
CLN6-201ENST00000249806 CEBPZQ03701 1054 aaKnown RBP25.47■■□□□ 1.67
CLN6-201ENST00000249806 HPS5Q9UPZ3 1129 aa25.47■■□□□ 1.67
CLN6-201ENST00000249806 CICQ96RK0 1608 aaPredicted RBP25.47■■□□□ 1.67
CLN6-201ENST00000249806 COL5A3P25940 1745 aaPredicted RBP25.47■■□□□ 1.67
CLN6-201ENST00000249806 CAMK4Q16566 473 aa25.47■■□□□ 1.67
CLN6-201ENST00000249806 ERFEQ4G0M1 354 aa25.47■■□□□ 1.67
CLN6-201ENST00000249806 C3orf67Q6ZVT6 689 aa25.47■■□□□ 1.67
CLN6-201ENST00000249806 ADD1P35611 737 aaKnown RBP25.46■■□□□ 1.67
CLN6-201ENST00000249806 KIF3AQ9Y496 699 aa25.46■■□□□ 1.67
CLN6-201ENST00000249806 MAP3K12Q12852 859 aa25.45■■□□□ 1.67
CLN6-201ENST00000249806 CLEC4GQ6UXB4 293 aa25.45■■□□□ 1.67
CLN6-201ENST00000249806 BICDL1Q6ZP65 573 aa25.45■■□□□ 1.67
CLN6-201ENST00000249806 DACT1Q9NYF0 836 aa25.45■■□□□ 1.67
CLN6-201ENST00000249806 CARMIL3Q8ND23 1372 aa25.45■■□□□ 1.67
CLN6-201ENST00000249806 RTL9Q8NET4 1388 aa25.45■■□□□ 1.67
CLN6-201ENST00000249806 TRDNQ13061 729 aa25.45■■□□□ 1.66
CLN6-201ENST00000249806 ZSCAN30Q86W11 494 aa25.45■■□□□ 1.66
CLN6-201ENST00000249806 FTOQ9C0B1 505 aaKnown RBP eCLIP25.45■■□□□ 1.66
CLN6-201ENST00000249806 BCL9LQ86UU0 1499 aa25.45■■□□□ 1.66
CLN6-201ENST00000249806 WTIPA6NIX2 430 aaPredicted RBP25.44■■□□□ 1.66
CLN6-201ENST00000249806 GOLGA8BA8MQT2 603 aa25.44■■□□□ 1.66
CLN6-201ENST00000249806 CYB5R4Q7L1T6 521 aa25.44■■□□□ 1.66
CLN6-201ENST00000249806 INCENPQ9NQS7 918 aa25.44■■□□□ 1.66
CLN6-201ENST00000249806 CFAP45Q9UL16 551 aa25.44■■□□□ 1.66
CLN6-201ENST00000249806 TAF1P21675 1872 aa25.44■■□□□ 1.66
CLN6-201ENST00000249806 MBD4O95243 580 aa25.43■■□□□ 1.66
CLN6-201ENST00000249806 VPS72Q15906 364 aa25.43■■□□□ 1.66
CLN6-201ENST00000249806 NUP62CLQ9H1M0 184 aa25.43■■□□□ 1.66
CLN6-201ENST00000249806 ARMT1Q9H993 441 aa25.43■■□□□ 1.66
CLN6-201ENST00000249806 IQSEC3Q9UPP2 1182 aaPredicted RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms