RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 TECPR2O15040 1411 aa19.55■□□□□ 0.72
SGPP1-201ENST00000247225 PLEKHG1Q9ULL1 1385 aa19.55■□□□□ 0.72
SGPP1-201ENST00000247225 FDPSP14324 419 aaKnown RBP19.55■□□□□ 0.72
SGPP1-201ENST00000247225 CMTR1Q8N1G2 835 aaKnown RBP19.55■□□□□ 0.72
SGPP1-201ENST00000247225 ZCCHC17Q9NP64 241 aaKnown RBP19.55■□□□□ 0.72
SGPP1-201ENST00000247225 CEP126Q9P2H0 1117 aa19.55■□□□□ 0.72
SGPP1-201ENST00000247225 FANCCQ00597 558 aa19.55■□□□□ 0.72
SGPP1-201ENST00000247225 KARSQ15046 597 aaKnown RBP19.54■□□□□ 0.72
SGPP1-201ENST00000247225 ERO1AQ96HE7 468 aa19.54■□□□□ 0.72
SGPP1-201ENST00000247225 COPRSQ9NQ92 184 aa19.54■□□□□ 0.72
SGPP1-201ENST00000247225 MAST3O60307 1309 aa19.54■□□□□ 0.72
SGPP1-201ENST00000247225 TMEM232C9JQI7 657 aa19.54■□□□□ 0.72
SGPP1-201ENST00000247225 KLHL10Q6JEL2 608 aa19.54■□□□□ 0.72
SGPP1-201ENST00000247225 RBM43Q6ZSC3 357 aaKnown RBP19.54■□□□□ 0.72
SGPP1-201ENST00000247225 NBPF11Q86T75 865 aa19.54■□□□□ 0.72
SGPP1-201ENST00000247225 TRMT44Q8IYL2 757 aaKnown RBP19.54■□□□□ 0.72
SGPP1-201ENST00000247225 KIF28PB7ZC32 967 aa19.54■□□□□ 0.72
SGPP1-201ENST00000247225 COBLO75128 1261 aa19.54■□□□□ 0.72
SGPP1-201ENST00000247225 SNRPA1P09661 255 aaKnown RBP19.54■□□□□ 0.72
SGPP1-201ENST00000247225 PFKFB1P16118 471 aa19.54■□□□□ 0.72
SGPP1-201ENST00000247225 SYKP43405 635 aa19.54■□□□□ 0.72
SGPP1-201ENST00000247225 NAA16Q6N069 864 aaPredicted RBP19.54■□□□□ 0.72
SGPP1-201ENST00000247225 MON2Q7Z3U7 1717 aa19.54■□□□□ 0.72
SGPP1-201ENST00000247225 HMGB1P09429 215 aaKnown RBP19.53■□□□□ 0.72
SGPP1-201ENST00000247225 GPTP24298 496 aa19.53■□□□□ 0.72
SGPP1-201ENST00000247225 GYS2P54840 703 aa19.53■□□□□ 0.72
SGPP1-201ENST00000247225 RBM6P78332 1123 aaKnown RBP19.53■□□□□ 0.72
SGPP1-201ENST00000247225 IMMTQ16891 758 aaKnown RBP19.53■□□□□ 0.72
SGPP1-201ENST00000247225 FMR1NBQ8N0W7 255 aaPredicted RBP19.53■□□□□ 0.72
SGPP1-201ENST00000247225 NEMFO60524 1076 aa19.53■□□□□ 0.72
SGPP1-201ENST00000247225 LINC00301Q8NCQ3 95 aa19.53■□□□□ 0.72
SGPP1-201ENST00000247225 SLC52A2Q9HAB3 445 aa19.53■□□□□ 0.72
SGPP1-201ENST00000247225 NRXN3Q9Y4C0 1643 aa19.53■□□□□ 0.72
SGPP1-201ENST00000247225 CARMIL3Q8ND23 1372 aa19.53■□□□□ 0.72
SGPP1-201ENST00000247225 PXDNQ92626 1479 aa19.53■□□□□ 0.72
SGPP1-201ENST00000247225 RNF113AO15541 343 aaKnown RBP19.53■□□□□ 0.72
SGPP1-201ENST00000247225 FGAP02671 866 aa19.53■□□□□ 0.72
SGPP1-201ENST00000247225 PDIA4P13667 645 aaKnown RBP19.53■□□□□ 0.72
SGPP1-201ENST00000247225 TRDNQ13061 729 aa19.53■□□□□ 0.72
SGPP1-201ENST00000247225 KRT28Q7Z3Y7 464 aa19.53■□□□□ 0.72
SGPP1-201ENST00000247225 ENGASEQ8NFI3 743 aa19.53■□□□□ 0.72
SGPP1-201ENST00000247225 NOL10Q9BSC4 688 aaKnown RBP19.53■□□□□ 0.72
SGPP1-201ENST00000247225 DESI2Q9BSY9 194 aa19.53■□□□□ 0.72
SGPP1-201ENST00000247225 ADKP55263 362 aaKnown RBP19.52■□□□□ 0.72
SGPP1-201ENST00000247225 GNG11P61952 73 aa19.52■□□□□ 0.72
SGPP1-201ENST00000247225 SMARCC2Q8TAQ2 1214 aa19.52■□□□□ 0.72
SGPP1-201ENST00000247225 SLFN14P0C7P3 912 aa19.52■□□□□ 0.72
SGPP1-201ENST00000247225 GSDMDP57764 484 aa19.52■□□□□ 0.72
SGPP1-201ENST00000247225 MYSM1Q5VVJ2 828 aa19.52■□□□□ 0.72
SGPP1-201ENST00000247225 USPL1Q5W0Q7 1092 aa19.52■□□□□ 0.72
SGPP1-201ENST00000247225 ARHGEF25Q86VW2 580 aa19.52■□□□□ 0.72
SGPP1-201ENST00000247225 SYNE4Q8N205 404 aa19.52■□□□□ 0.72
SGPP1-201ENST00000247225 FAM89AQ96GI7 184 aa19.52■□□□□ 0.72
SGPP1-201ENST00000247225 ALG1Q9BT22 464 aa19.52■□□□□ 0.72
SGPP1-201ENST00000247225 ZNF213O14771 459 aa19.51■□□□□ 0.71
SGPP1-201ENST00000247225 FOXN1O15353 648 aa19.51■□□□□ 0.71
SGPP1-201ENST00000247225 TOP1P11387 765 aaKnown RBP19.51■□□□□ 0.71
SGPP1-201ENST00000247225 TERF2Q15554 542 aa19.51■□□□□ 0.71
SGPP1-201ENST00000247225 ADALQ6DHV7 355 aa19.51■□□□□ 0.71
SGPP1-201ENST00000247225 BBXQ8WY36 941 aaPredicted RBP19.51■□□□□ 0.71
SGPP1-201ENST00000247225 ZKSCAN3Q9BRR0 538 aa19.51■□□□□ 0.71
SGPP1-201ENST00000247225 ZAP70P43403 619 aa19.51■□□□□ 0.71
SGPP1-201ENST00000247225 RFX5P48382 616 aaPredicted RBP19.51■□□□□ 0.71
SGPP1-201ENST00000247225 SCARF1Q14162 830 aa19.51■□□□□ 0.71
SGPP1-201ENST00000247225 CCDC57Q2TAC2 916 aa19.51■□□□□ 0.71
SGPP1-201ENST00000247225 CCDC158Q5M9N0 1113 aa19.51■□□□□ 0.71
SGPP1-201ENST00000247225 HELBQ8NG08 1087 aaPredicted RBP19.51■□□□□ 0.71
SGPP1-201ENST00000247225 FANCLQ9NW38 375 aa19.51■□□□□ 0.71
SGPP1-201ENST00000247225 CAVIN2O95810 425 aa19.51■□□□□ 0.71
SGPP1-201ENST00000247225 CLCN6P51797 869 aa19.51■□□□□ 0.71
SGPP1-201ENST00000247225 NYAP1Q6ZVC0 841 aa19.51■□□□□ 0.71
SGPP1-201ENST00000247225 GRAMD1CQ8IYS0 662 aa19.51■□□□□ 0.71
SGPP1-201ENST00000247225 PUS7LQ9H0K6 701 aaKnown RBP19.51■□□□□ 0.71
SGPP1-201ENST00000247225 WDHD1O75717 1129 aaPredicted RBP19.5■□□□□ 0.71
SGPP1-201ENST00000247225 ANO1Q5XXA6 986 aa19.5■□□□□ 0.71
SGPP1-201ENST00000247225 TMCO3Q6UWJ1 677 aa19.5■□□□□ 0.71
SGPP1-201ENST00000247225 NEK11Q8NG66 645 aa19.5■□□□□ 0.71
SGPP1-201ENST00000247225 OLFM4Q6UX06 510 aa19.5■□□□□ 0.71
SGPP1-201ENST00000247225 CNNM3Q8NE01 707 aa19.5■□□□□ 0.71
SGPP1-201ENST00000247225 LLPHQ9BRT6 129 aaKnown RBP19.5■□□□□ 0.71
SGPP1-201ENST00000247225 SENP2Q9HC62 589 aa19.5■□□□□ 0.71
SGPP1-201ENST00000247225 ZNF446Q9NWS9 450 aa19.5■□□□□ 0.71
SGPP1-201ENST00000247225 SPATA31D1Q6ZQQ2 1576 aa19.49■□□□□ 0.71
SGPP1-201ENST00000247225 STX17P56962 302 aa19.49■□□□□ 0.71
SGPP1-201ENST00000247225 SARM1Q6SZW1 724 aa19.49■□□□□ 0.71
SGPP1-201ENST00000247225 PXDNLA1KZ92 1463 aa19.49■□□□□ 0.71
SGPP1-201ENST00000247225 B4E1Z4 1266 aa19.49■□□□□ 0.71
SGPP1-201ENST00000247225 TSGA10IPQ3SY00 556 aa19.49■□□□□ 0.71
SGPP1-201ENST00000247225 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.49■□□□□ 0.71
SGPP1-201ENST00000247225 XRN1Q8IZH2 1706 aaKnown RBP19.48■□□□□ 0.71
SGPP1-201ENST00000247225 TRHP20396 242 aaPredicted RBP19.48■□□□□ 0.71
SGPP1-201ENST00000247225 MORC2Q9Y6X9 1032 aaPredicted RBP19.48■□□□□ 0.71
SGPP1-201ENST00000247225 KAT6BQ8WYB5 2073 aa19.48■□□□□ 0.71
SGPP1-201ENST00000247225 hCG_1642624A0A1W2PR95 340 aa19.48■□□□□ 0.71
SGPP1-201ENST00000247225 CDC25BP30305 580 aa19.48■□□□□ 0.71
SGPP1-201ENST00000247225 EXOSC10Q01780 885 aaKnown RBP19.48■□□□□ 0.71
SGPP1-201ENST00000247225 TRIM29Q14134 588 aa19.48■□□□□ 0.71
SGPP1-201ENST00000247225 FBXO18Q8NFZ0 1043 aa19.48■□□□□ 0.71
SGPP1-201ENST00000247225 KCNG4Q8TDN1 519 aa19.48■□□□□ 0.71
SGPP1-201ENST00000247225 NUP133Q8WUM0 1156 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms