RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 HMGB1P09429 215 aaKnown RBP14.01□□□□□ -0.17
SEC61A1-201ENST00000243253 HPS5Q9UPZ3 1129 aa14.01□□□□□ -0.17
SEC61A1-201ENST00000243253 SPDYE4A6NLX3 237 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 NBPF26B4DH59 902 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 ATF3P18847 181 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 NCAPHQ15003 741 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 NBPF14Q5TI25 921 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 NBPF10Q6P3W6 841 aaKnown RBP14□□□□□ -0.17
SEC61A1-201ENST00000243253 NBPF15Q8N660 670 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 RTEL1Q9NZ71 1219 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 PCDHA7Q9UN72 937 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 MORC2Q9Y6X9 1032 aaPredicted RBP14□□□□□ -0.17
SEC61A1-201ENST00000243253 ARAP2Q8WZ64 1704 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 DOCK2Q92608 1830 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 H3BQV1 296 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 GPTP24298 496 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 TAF7LQ5H9L4 462 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 IFFO2Q5TF58 517 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 NCOA5Q9HCD5 579 aaKnown RBP14□□□□□ -0.17
SEC61A1-201ENST00000243253 CHD4Q14839 1912 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 TOM1L2Q6ZVM7 507 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 NKX2-3Q8TAU0 364 aa14□□□□□ -0.17
SEC61A1-201ENST00000243253 M0R2C6 588 aa13.99□□□□□ -0.17
SEC61A1-201ENST00000243253 CABP4P57796 275 aa13.99□□□□□ -0.17
SEC61A1-201ENST00000243253 CCDC93Q567U6 631 aa13.99□□□□□ -0.17
SEC61A1-201ENST00000243253 GOLIM4O00461 696 aa13.99□□□□□ -0.17
SEC61A1-201ENST00000243253 WASHC4Q2M389 1173 aa13.99□□□□□ -0.17
SEC61A1-201ENST00000243253 PAG1Q9NWQ8 432 aa13.99□□□□□ -0.17
SEC61A1-201ENST00000243253 A0A1W2PQ27 194 aa13.98□□□□□ -0.17
SEC61A1-201ENST00000243253 A0A1W2PQ64 194 aa13.98□□□□□ -0.17
SEC61A1-201ENST00000243253 A0A1W2PQD8 194 aa13.98□□□□□ -0.17
SEC61A1-201ENST00000243253 SNRPA1P09661 255 aaKnown RBP13.98□□□□□ -0.17
SEC61A1-201ENST00000243253 ADALQ6DHV7 355 aa13.98□□□□□ -0.17
SEC61A1-201ENST00000243253 CCAR2Q8N163 923 aaKnown RBP13.98□□□□□ -0.17
SEC61A1-201ENST00000243253 LINC00301Q8NCQ3 95 aa13.98□□□□□ -0.17
SEC61A1-201ENST00000243253 PLBD2Q8NHP8 589 aa13.98□□□□□ -0.17
SEC61A1-201ENST00000243253 FANCGO15287 622 aa13.98□□□□□ -0.17
SEC61A1-201ENST00000243253 E4F1Q66K89 784 aaPredicted RBP13.98□□□□□ -0.17
SEC61A1-201ENST00000243253 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.98□□□□□ -0.17
SEC61A1-201ENST00000243253 FMNL2Q96PY5 1086 aa13.98□□□□□ -0.17
SEC61A1-201ENST00000243253 OGFRQ9NZT2 677 aa13.98□□□□□ -0.17
SEC61A1-201ENST00000243253 NEMFO60524 1076 aa13.98□□□□□ -0.17
SEC61A1-201ENST00000243253 KIF18AQ8NI77 898 aa13.98□□□□□ -0.17
SEC61A1-201ENST00000243253 A1BGP04217 495 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 CHAF1AQ13111 956 aaPredicted RBP13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 KMT5BQ4FZB7 885 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 AXDND1Q5T1B0 1012 aaPredicted RBP13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 CEP135Q66GS9 1140 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 LMBR1LQ6UX01 489 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 L2HGDHQ9H9P8 463 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 TOMM22Q9NS69 142 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 MYH3P11055 1940 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 COL22A1Q8NFW1 1626 aaPredicted RBP13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 TATP17735 454 aaPredicted RBP13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 NDUFA8P51970 172 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 ARMCX5Q6P1M9 558 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 ZBTB9Q96C00 473 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 NBPF3Q9H094 633 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 GPHNQ9NQX3 736 aaPredicted RBP13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 TNS2Q63HR2 1409 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 ANKRD36CQ5JPF3 1778 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 ANTXR2P58335 489 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 RGS22Q8NE09 1264 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 OSBP2Q969R2 916 aa13.97□□□□□ -0.17
SEC61A1-201ENST00000243253 KCNJ6P48051 423 aa13.96□□□□□ -0.17
SEC61A1-201ENST00000243253 ZNF446Q9NWS9 450 aa13.96□□□□□ -0.17
SEC61A1-201ENST00000243253 CLIC4Q9Y696 253 aa13.96□□□□□ -0.17
SEC61A1-201ENST00000243253 CCDC69A6NI79 296 aa13.96□□□□□ -0.17
SEC61A1-201ENST00000243253 APPP05067 770 aa13.96□□□□□ -0.17
SEC61A1-201ENST00000243253 ZNF592Q92610 1267 aa13.96□□□□□ -0.17
SEC61A1-201ENST00000243253 PRDM11Q9NQV5 511 aa13.96□□□□□ -0.17
SEC61A1-201ENST00000243253 POLR3EQ9NVU0 708 aa13.96□□□□□ -0.17
SEC61A1-201ENST00000243253 XIRP1Q702N8 1843 aaKnown RBP13.96□□□□□ -0.17
SEC61A1-201ENST00000243253 KIF28PB7ZC32 967 aa13.96□□□□□ -0.18
SEC61A1-201ENST00000243253 SKILP12757 684 aa13.96□□□□□ -0.18
SEC61A1-201ENST00000243253 DPCR1Q3MIW9 517 aa13.96□□□□□ -0.18
SEC61A1-201ENST00000243253 LRRC24Q50LG9 513 aa13.96□□□□□ -0.18
SEC61A1-201ENST00000243253 TTLL5Q6EMB2 1281 aa13.96□□□□□ -0.18
SEC61A1-201ENST00000243253 ISM2Q6H9L7 571 aa13.96□□□□□ -0.18
SEC61A1-201ENST00000243253 MB21D2Q8IYB1 491 aaPredicted RBP13.96□□□□□ -0.18
SEC61A1-201ENST00000243253 ZHX1Q9UKY1 873 aaPredicted RBP13.96□□□□□ -0.18
SEC61A1-201ENST00000243253 BCORQ6W2J9 1755 aa13.96□□□□□ -0.18
SEC61A1-201ENST00000243253 SLFN14P0C7P3 912 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 EVA1CP58658 441 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 DCAF5Q96JK2 942 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 ZNF215Q9UL58 517 aaPredicted RBP13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 TIAM2Q8IVF5 1701 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 MROH7-TTC4A0A0A0MT08 1334 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 ABCA3Q99758 1704 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 KIF20AO95235 890 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 OTUD7BQ6GQQ9 843 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 CCDC82Q8N4S0 544 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 KIAA1468Q9P260 1216 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 LRP5O75197 1615 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 FAM237AA0A1B0GTK4 181 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 CIAO1O76071 339 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 TMX1Q9H3N1 280 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 ATG3Q9NT62 314 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 IMPACTQ9P2X3 320 aa13.95□□□□□ -0.18
SEC61A1-201ENST00000243253 ATRNO75882 1429 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms