RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 STK31Q9BXU1 1019 aa17.65■□□□□ 0.42
DDX39A-201ENST00000242776 ANKRD2Q9GZV1 360 aa17.65■□□□□ 0.42
DDX39A-201ENST00000242776 CD209Q9NNX6 404 aa17.65■□□□□ 0.42
DDX39A-201ENST00000242776 HTTP42858 3142 aa17.65■□□□□ 0.42
DDX39A-201ENST00000242776 PPP1R12BO60237 982 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-201ENST00000242776 EN2P19622 333 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-201ENST00000242776 RBM5P52756 815 aaKnown RBP eCLIP17.64■□□□□ 0.414e-7■□□□□ 8.1
DDX39A-201ENST00000242776 CFAP100Q494V2 611 aa17.64■□□□□ 0.41
DDX39A-201ENST00000242776 NBPF12Q5TAG4 269 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-201ENST00000242776 AOX1Q06278 1338 aa17.64■□□□□ 0.41
DDX39A-201ENST00000242776 A0A1B0GUL6 1792 aa17.63■□□□□ 0.41
DDX39A-201ENST00000242776 H7C1W4 665 aa17.63■□□□□ 0.41
DDX39A-201ENST00000242776 GJA5P36382 358 aa17.63■□□□□ 0.41
DDX39A-201ENST00000242776 CRHR2Q13324 411 aa17.63■□□□□ 0.41
DDX39A-201ENST00000242776 MYCP01106 439 aaPredicted RBP17.63■□□□□ 0.41
DDX39A-201ENST00000242776 INHBEP58166 350 aa17.63■□□□□ 0.41
DDX39A-201ENST00000242776 MIER1Q8N108 512 aa17.63■□□□□ 0.41
DDX39A-201ENST00000242776 ERO1AQ96HE7 468 aa17.63■□□□□ 0.41
DDX39A-201ENST00000242776 PRMT6Q96LA8 375 aaPredicted RBP17.63■□□□□ 0.41
DDX39A-201ENST00000242776 PTPN22Q9Y2R2 807 aa17.63■□□□□ 0.41
DDX39A-201ENST00000242776 CHMP3Q9Y3E7 222 aa17.63■□□□□ 0.41
DDX39A-201ENST00000242776 OTOFQ9HC10 1997 aa17.62■□□□□ 0.41
DDX39A-201ENST00000242776 COL1A1P02452 1464 aaPredicted RBP17.62■□□□□ 0.41
DDX39A-201ENST00000242776 CCER2I3L3R5 266 aa17.62■□□□□ 0.41
DDX39A-201ENST00000242776 PLIN1O60240 522 aa17.62■□□□□ 0.41
DDX39A-201ENST00000242776 ZBTB48P10074 688 aaPredicted RBP17.62■□□□□ 0.41
DDX39A-201ENST00000242776 CAP1Q01518 475 aa17.62■□□□□ 0.41
DDX39A-201ENST00000242776 LAMB1P07942 1786 aa17.61■□□□□ 0.41
DDX39A-201ENST00000242776 RBBP6Q7Z6E9 1792 aaKnown RBP17.61■□□□□ 0.41
DDX39A-201ENST00000242776 MYO1BO43795 1136 aa17.61■□□□□ 0.41
DDX39A-201ENST00000242776 SLC4A2P04920 1241 aa17.61■□□□□ 0.41
DDX39A-201ENST00000242776 GCKRQ14397 625 aa17.61■□□□□ 0.41
DDX39A-201ENST00000242776 INTS3Q68E01 1043 aaKnown RBP17.61■□□□□ 0.41
DDX39A-201ENST00000242776 ELP3Q9H9T3 547 aa17.61■□□□□ 0.41
DDX39A-201ENST00000242776 EFCC1Q9HA90 598 aa17.61■□□□□ 0.41
DDX39A-201ENST00000242776 ANKRD18BA2A2Z9 1011 aa17.6■□□□□ 0.41
DDX39A-201ENST00000242776 USP2O75604 605 aaPredicted RBP17.6■□□□□ 0.41
DDX39A-201ENST00000242776 IREB2P48200 963 aaKnown RBP17.6■□□□□ 0.41
DDX39A-201ENST00000242776 MMP14P50281 582 aa17.6■□□□□ 0.41
DDX39A-201ENST00000242776 MAP3K11Q16584 847 aa17.6■□□□□ 0.41
DDX39A-201ENST00000242776 SUPT20HL1Q3ZLR7 823 aa17.6■□□□□ 0.41
DDX39A-201ENST00000242776 PTPN18Q99952 460 aa17.6■□□□□ 0.41
DDX39A-201ENST00000242776 SPDYE2BA6NHP3 402 aa17.59■□□□□ 0.41
DDX39A-201ENST00000242776 ECM2O94769 699 aaPredicted RBP17.59■□□□□ 0.41
DDX39A-201ENST00000242776 SPDYE6P0CI01 402 aa17.59■□□□□ 0.41
DDX39A-201ENST00000242776 RASA3Q14644 834 aa17.59■□□□□ 0.41
DDX39A-201ENST00000242776 TWISTNBQ3B726 338 aaPredicted RBP17.59■□□□□ 0.41
DDX39A-201ENST00000242776 OTUD7BQ6GQQ9 843 aa17.59■□□□□ 0.41
DDX39A-201ENST00000242776 BRCA2P51587 3418 aa17.59■□□□□ 0.41
DDX39A-201ENST00000242776 SP3Q02447 781 aa17.58■□□□□ 0.41
DDX39A-201ENST00000242776 CNKSR2Q8WXI2 1034 aa17.58■□□□□ 0.41
DDX39A-201ENST00000242776 OPTNQ96CV9 577 aa17.58■□□□□ 0.41
DDX39A-201ENST00000242776 CHMP4AQ9BY43 222 aa17.58■□□□□ 0.41
DDX39A-201ENST00000242776 MRS2Q9HD23 443 aa17.58■□□□□ 0.41
DDX39A-201ENST00000242776 PPP2R3BQ9Y5P8 575 aa17.58■□□□□ 0.41
DDX39A-201ENST00000242776 ZSWIM8A7E2V4 1837 aa17.57■□□□□ 0.4
DDX39A-201ENST00000242776 CSF1RP07333 972 aa17.57■□□□□ 0.4
DDX39A-201ENST00000242776 CASP7P55210 303 aa17.57■□□□□ 0.4
DDX39A-201ENST00000242776 FKBP5Q13451 457 aaPredicted RBP17.57■□□□□ 0.4
DDX39A-201ENST00000242776 ZNF804AQ7Z570 1209 aa17.57■□□□□ 0.4
DDX39A-201ENST00000242776 ANKRD13AQ8IZ07 590 aa17.57■□□□□ 0.4
DDX39A-201ENST00000242776 MTMR14Q8NCE2 650 aa17.57■□□□□ 0.4
DDX39A-201ENST00000242776 PLA2G12BQ9BX93 195 aa17.57■□□□□ 0.4
DDX39A-201ENST00000242776 MYH16Q9H6N6 1097 aa17.57■□□□□ 0.4
DDX39A-201ENST00000242776 IRS2Q9Y4H2 1338 aa17.57■□□□□ 0.4
DDX39A-201ENST00000242776 CDAN1Q8IWY9 1227 aa17.56■□□□□ 0.4
DDX39A-201ENST00000242776 ZNF594Q96JF6 807 aaPredicted RBP17.56■□□□□ 0.4
DDX39A-201ENST00000242776 TMEM106CQ9BVX2 250 aa17.56■□□□□ 0.4
DDX39A-201ENST00000242776 FLIIQ13045 1269 aa17.56■□□□□ 0.4
DDX39A-201ENST00000242776 IFIT5Q13325 482 aaKnown RBP17.56■□□□□ 0.4
DDX39A-201ENST00000242776 DNAAF4Q8WXU2 420 aa17.56■□□□□ 0.4
DDX39A-201ENST00000242776 TDRD3Q9H7E2 651 aaKnown RBP17.56■□□□□ 0.4
DDX39A-201ENST00000242776 TCP10L2B9ZVM9 353 aa17.55■□□□□ 0.4
DDX39A-201ENST00000242776 SLC4A8Q2Y0W8 1093 aa17.55■□□□□ 0.4
DDX39A-201ENST00000242776 ARMC5Q96C12 935 aa17.55■□□□□ 0.4
DDX39A-201ENST00000242776 PTCH2Q9Y6C5 1203 aa17.55■□□□□ 0.4
DDX39A-201ENST00000242776 IL1R1P14778 569 aa17.54■□□□□ 0.4
DDX39A-201ENST00000242776 FXR1P51114 621 aaKnown RBP eCLIP17.54■□□□□ 0.4
DDX39A-201ENST00000242776 TAF1CQ15572 869 aaPredicted RBP17.54■□□□□ 0.4
DDX39A-201ENST00000242776 SLC9C1Q4G0N8 1177 aa17.54■□□□□ 0.4
DDX39A-201ENST00000242776 TAF7LQ5H9L4 462 aa17.54■□□□□ 0.4
DDX39A-201ENST00000242776 ZNF70Q9UC06 446 aaPredicted RBP17.54■□□□□ 0.4
DDX39A-201ENST00000242776 CCL15-CCL14A0A0B4J2E2 113 aa17.53■□□□□ 0.4
DDX39A-201ENST00000242776 FOXO4P98177 505 aa17.53■□□□□ 0.4
DDX39A-201ENST00000242776 CCL15Q16663 113 aa17.53■□□□□ 0.4
DDX39A-201ENST00000242776 LINS1Q8NG48 757 aa17.53■□□□□ 0.4
DDX39A-201ENST00000242776 BRI3BPQ8WY22 251 aa17.53■□□□□ 0.4
DDX39A-201ENST00000242776 OTUD5Q96G74 571 aa17.53■□□□□ 0.4
DDX39A-201ENST00000242776 CNNM1Q9NRU3 951 aa17.53■□□□□ 0.4
DDX39A-201ENST00000242776 TTF2Q9UNY4 1162 aaKnown RBP17.53■□□□□ 0.4
DDX39A-201ENST00000242776 COLQQ9Y215 455 aaPredicted RBP17.53■□□□□ 0.4
DDX39A-201ENST00000242776 F6X3S4 739 aa17.52■□□□□ 0.4
DDX39A-201ENST00000242776 LMBR1LQ6UX01 489 aa17.52■□□□□ 0.4
DDX39A-201ENST00000242776 SH3TC2Q8TF17 1288 aa17.52■□□□□ 0.4
DDX39A-201ENST00000242776 ZNF333Q96JL9 665 aa17.52■□□□□ 0.4
DDX39A-201ENST00000242776 MS4A4AQ96JQ5 239 aa17.52■□□□□ 0.4
DDX39A-201ENST00000242776 TMEM39BQ9GZU3 492 aa17.52■□□□□ 0.4
DDX39A-201ENST00000242776 TESPA1A2RU30 521 aaPredicted RBP17.51■□□□□ 0.39
DDX39A-201ENST00000242776 GYG1P46976 350 aa17.51■□□□□ 0.39
DDX39A-201ENST00000242776 VGLL4Q14135 290 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms