RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 MTX1Q13505 466 aa16.34■□□□□ 0.21
PCDHB3-201ENST00000231130 MCMDC2Q4G0Z9 681 aa16.34■□□□□ 0.21
PCDHB3-201ENST00000231130 NEO1Q92859 1461 aa16.34■□□□□ 0.21
PCDHB3-201ENST00000231130 GIGYF1O75420 1035 aaPredicted RBP16.34■□□□□ 0.21
PCDHB3-201ENST00000231130 SYNE3Q6ZMZ3 975 aa16.34■□□□□ 0.21
PCDHB3-201ENST00000231130 GOLGA5Q8TBA6 731 aa16.34■□□□□ 0.21
PCDHB3-201ENST00000231130 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
PCDHB3-201ENST00000231130 TUBGCP6Q96RT7 1819 aa16.34■□□□□ 0.21
PCDHB3-201ENST00000231130 TIMM10P62072 90 aa16.34■□□□□ 0.21
PCDHB3-201ENST00000231130 ARFGAP3Q9NP61 516 aa16.34■□□□□ 0.21
PCDHB3-201ENST00000231130 SNRKQ9NRH2 765 aa16.34■□□□□ 0.21
PCDHB3-201ENST00000231130 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
PCDHB3-201ENST00000231130 KIAA1468Q9P260 1216 aa16.34■□□□□ 0.21
PCDHB3-201ENST00000231130 COPS6Q7L5N1 327 aa16.33■□□□□ 0.2
PCDHB3-201ENST00000231130 DHX32Q7L7V1 743 aaKnown RBP16.33■□□□□ 0.2
PCDHB3-201ENST00000231130 PACS2Q86VP3 889 aa16.33■□□□□ 0.2
PCDHB3-201ENST00000231130 NRKQ7Z2Y5 1582 aa16.33■□□□□ 0.2
PCDHB3-201ENST00000231130 C3P01024 1663 aa16.33■□□□□ 0.2
PCDHB3-201ENST00000231130 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.2
PCDHB3-201ENST00000231130 XRN1Q8IZH2 1706 aaKnown RBP16.33■□□□□ 0.2
PCDHB3-201ENST00000231130 IGKV5-2P06315 115 aa16.32■□□□□ 0.2
PCDHB3-201ENST00000231130 ENGASEQ8NFI3 743 aa16.32■□□□□ 0.2
PCDHB3-201ENST00000231130 ORC3Q9UBD5 711 aaPredicted RBP16.32■□□□□ 0.2
PCDHB3-201ENST00000231130 CPLX1O14810 134 aa16.32■□□□□ 0.2
PCDHB3-201ENST00000231130 RXRAP19793 462 aa16.32■□□□□ 0.2
PCDHB3-201ENST00000231130 UBASH3AP57075 661 aa16.32■□□□□ 0.2
PCDHB3-201ENST00000231130 CNPY4Q8N129 248 aa16.32■□□□□ 0.2
PCDHB3-201ENST00000231130 DPF2Q92785 391 aa16.32■□□□□ 0.2
PCDHB3-201ENST00000231130 FANCCQ00597 558 aa16.32■□□□□ 0.2
PCDHB3-201ENST00000231130 TNNI3KQ59H18 835 aa16.32■□□□□ 0.2
PCDHB3-201ENST00000231130 FAM212AQ96EL1 285 aa16.32■□□□□ 0.2
PCDHB3-201ENST00000231130 C8orf76Q96K31 380 aa16.32■□□□□ 0.2
PCDHB3-201ENST00000231130 FPGT-TNNI3KV9GXZ4 949 aa16.32■□□□□ 0.2
PCDHB3-201ENST00000231130 ITSN1Q15811 1721 aa16.32■□□□□ 0.2
PCDHB3-201ENST00000231130 MED23Q9ULK4 1368 aa16.31■□□□□ 0.2
PCDHB3-201ENST00000231130 PFKFB2O60825 505 aa16.31■□□□□ 0.2
PCDHB3-201ENST00000231130 ACTN2P35609 894 aa16.31■□□□□ 0.2
PCDHB3-201ENST00000231130 PSEN1P49768 467 aa16.31■□□□□ 0.2
PCDHB3-201ENST00000231130 CT47A1Q5JQC4 288 aaPredicted RBP16.31■□□□□ 0.2
PCDHB3-201ENST00000231130 ZNF202O95125 648 aa16.31■□□□□ 0.2
PCDHB3-201ENST00000231130 FOXR1Q6PIV2 292 aa16.31■□□□□ 0.2
PCDHB3-201ENST00000231130 ILDR1Q86SU0 546 aaPredicted RBP16.31■□□□□ 0.2
PCDHB3-201ENST00000231130 FMR1NBQ8N0W7 255 aaPredicted RBP16.31■□□□□ 0.2
PCDHB3-201ENST00000231130 MICALL1Q8N3F8 863 aa16.31■□□□□ 0.2
PCDHB3-201ENST00000231130 RIMBP3CA6NJZ7 1639 aa16.31■□□□□ 0.2
PCDHB3-201ENST00000231130 RIMBP3BA6NNM3 1639 aa16.31■□□□□ 0.2
PCDHB3-201ENST00000231130 RIMBP3Q9UFD9 1639 aa16.31■□□□□ 0.2
PCDHB3-201ENST00000231130 IBSPP21815 317 aaPredicted RBP16.3■□□□□ 0.2
PCDHB3-201ENST00000231130 MNAT1P51948 309 aa16.3■□□□□ 0.2
PCDHB3-201ENST00000231130 GNG11P61952 73 aa16.3■□□□□ 0.2
PCDHB3-201ENST00000231130 ETF1P62495 437 aaKnown RBP16.3■□□□□ 0.2
PCDHB3-201ENST00000231130 FKBP4Q02790 459 aaKnown RBP eCLIP16.3■□□□□ 0.2
PCDHB3-201ENST00000231130 WASHC4Q2M389 1173 aa16.3■□□□□ 0.2
PCDHB3-201ENST00000231130 PLEKHO1Q53GL0 409 aaPredicted RBP16.3■□□□□ 0.2
PCDHB3-201ENST00000231130 CCDC85AQ96PX6 553 aaPredicted RBP16.3■□□□□ 0.2
PCDHB3-201ENST00000231130 MON2Q7Z3U7 1717 aa16.3■□□□□ 0.2
PCDHB3-201ENST00000231130 SPTLC2O15270 562 aa16.3■□□□□ 0.2
PCDHB3-201ENST00000231130 SASH3O75995 380 aa16.3■□□□□ 0.2
PCDHB3-201ENST00000231130 SPECC1Q5M775 1068 aa16.3■□□□□ 0.2
PCDHB3-201ENST00000231130 EID1Q9Y6B2 187 aa16.3■□□□□ 0.2
PCDHB3-201ENST00000231130 TMEM232C9JQI7 657 aa16.3■□□□□ 0.2
PCDHB3-201ENST00000231130 CCDC150Q8NCX0 1101 aa16.3■□□□□ 0.2
PCDHB3-201ENST00000231130 EIF3CLB5ME19 914 aaKnown RBP16.29■□□□□ 0.2
PCDHB3-201ENST00000231130 RNMTO43148 476 aaKnown RBP16.29■□□□□ 0.2
PCDHB3-201ENST00000231130 PDIA3P30101 505 aaKnown RBP16.29■□□□□ 0.2
PCDHB3-201ENST00000231130 KARSQ15046 597 aaKnown RBP16.29■□□□□ 0.2
PCDHB3-201ENST00000231130 NAA16Q6N069 864 aaPredicted RBP16.29■□□□□ 0.2
PCDHB3-201ENST00000231130 CCDC102AQ96A19 550 aa16.29■□□□□ 0.2
PCDHB3-201ENST00000231130 EIF3CQ99613 913 aaKnown RBP16.29■□□□□ 0.2
PCDHB3-201ENST00000231130 E7EWF7 191 aa16.29■□□□□ 0.2
PCDHB3-201ENST00000231130 BRMS1Q9HCU9 246 aa16.29■□□□□ 0.2
PCDHB3-201ENST00000231130 KCNG1Q9UIX4 513 aa16.29■□□□□ 0.2
PCDHB3-201ENST00000231130 ZNF609O15014 1411 aa16.29■□□□□ 0.2
PCDHB3-201ENST00000231130 SMARCC2Q8TAQ2 1214 aa16.29■□□□□ 0.2
PCDHB3-201ENST00000231130 AIFM3Q96NN9 605 aa16.29■□□□□ 0.2
PCDHB3-201ENST00000231130 ATP2B1P20020 1258 aa16.28■□□□□ 0.2
PCDHB3-201ENST00000231130 ADALQ6DHV7 355 aa16.28■□□□□ 0.2
PCDHB3-201ENST00000231130 DESI2Q9BSY9 194 aa16.28■□□□□ 0.2
PCDHB3-201ENST00000231130 BABAM1Q9NWV8 329 aa16.28■□□□□ 0.2
PCDHB3-201ENST00000231130 PXDNLA1KZ92 1463 aa16.28■□□□□ 0.2
PCDHB3-201ENST00000231130 A0A087WZG4 1122 aa16.28■□□□□ 0.2
PCDHB3-201ENST00000231130 TOP1P11387 765 aaKnown RBP16.28■□□□□ 0.2
PCDHB3-201ENST00000231130 PNOCQ13519 176 aa16.28■□□□□ 0.2
PCDHB3-201ENST00000231130 OSBPL5Q9H0X9 879 aaPredicted RBP16.28■□□□□ 0.2
PCDHB3-201ENST00000231130 IVLP07476 585 aa16.27■□□□□ 0.2
PCDHB3-201ENST00000231130 MAGEA9P43362 315 aa16.27■□□□□ 0.2
PCDHB3-201ENST00000231130 PSME1Q06323 249 aa16.27■□□□□ 0.2
PCDHB3-201ENST00000231130 CCDC91Q7Z6B0 441 aa16.27■□□□□ 0.2
PCDHB3-201ENST00000231130 KLF18A0A0U1RQI7 1052 aa16.27■□□□□ 0.2
PCDHB3-201ENST00000231130 NEURL1BA8MQ27 555 aa16.27■□□□□ 0.2
PCDHB3-201ENST00000231130 GOLGA8BA8MQT2 603 aa16.27■□□□□ 0.2
PCDHB3-201ENST00000231130 ZRANB2O95218 330 aaKnown RBP eCLIP16.27■□□□□ 0.2
PCDHB3-201ENST00000231130 ATP5JP18859 108 aa16.27■□□□□ 0.2
PCDHB3-201ENST00000231130 ADKP55263 362 aaKnown RBP16.27■□□□□ 0.2
PCDHB3-201ENST00000231130 GCKRQ14397 625 aa16.27■□□□□ 0.2
PCDHB3-201ENST00000231130 AKAP4Q5JQC9 854 aa16.27■□□□□ 0.2
PCDHB3-201ENST00000231130 AXDND1Q5T1B0 1012 aaPredicted RBP16.27■□□□□ 0.2
PCDHB3-201ENST00000231130 LINC00301Q8NCQ3 95 aa16.27■□□□□ 0.2
PCDHB3-201ENST00000231130 ZNF330Q9Y3S2 320 aaPredicted RBP16.27■□□□□ 0.2
PCDHB3-201ENST00000231130 TBC1D8O95759 1140 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms