RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.24■□□□□ 0.19
SCNN1A-201ENST00000228916 C5P01031 1676 aa16.24■□□□□ 0.19
SCNN1A-201ENST00000228916 YEATS4O95619 227 aa16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 DDX46Q7L014 1031 aaKnown RBP16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 SRRTQ9BXP5 876 aaKnown RBP16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 ARGLU1Q9NWB6 273 aaPredicted RBP16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 PALLDQ8WX93 1383 aa16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 IKBKBO14920 756 aa16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 NEXNQ0ZGT2 675 aa16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 UBXN4Q92575 508 aa16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 POLR3EQ9NVU0 708 aa16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 TADA3O75528 432 aa16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 SLC3A2P08195 630 aaKnown RBP16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 TMCO3Q6UWJ1 677 aa16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 HOMER1Q86YM7 354 aa16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 MYD88Q99836 296 aa16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 TMX1Q9H3N1 280 aa16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 HELLSQ9NRZ9 838 aa16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 DNAI1Q9UI46 699 aa16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 CLIC4Q9Y696 253 aa16.23■□□□□ 0.19
SCNN1A-201ENST00000228916 FER1L4A9Z1Z3 1794 aa16.22■□□□□ 0.19
SCNN1A-201ENST00000228916 E7EWF7 191 aa16.22■□□□□ 0.19
SCNN1A-201ENST00000228916 EVCP57679 992 aa16.22■□□□□ 0.19
SCNN1A-201ENST00000228916 FANCCQ00597 558 aa16.22■□□□□ 0.19
SCNN1A-201ENST00000228916 SLC20A2Q08357 652 aa16.22■□□□□ 0.19
SCNN1A-201ENST00000228916 FBXL16Q8N461 479 aa16.22■□□□□ 0.19
SCNN1A-201ENST00000228916 HSD3B7Q9H2F3 369 aa16.22■□□□□ 0.19
SCNN1A-201ENST00000228916 STK38Q15208 465 aa16.22■□□□□ 0.19
SCNN1A-201ENST00000228916 RABL6Q3YEC7 729 aaPredicted RBP16.22■□□□□ 0.19
SCNN1A-201ENST00000228916 XAGE3Q8WTP9 111 aa16.22■□□□□ 0.19
SCNN1A-201ENST00000228916 METTL22Q9BUU2 404 aaPredicted RBP16.22■□□□□ 0.19
SCNN1A-201ENST00000228916 UBXN6Q9BZV1 441 aa16.22■□□□□ 0.19
SCNN1A-201ENST00000228916 FANCGO15287 622 aa16.21■□□□□ 0.19
SCNN1A-201ENST00000228916 ATP8B1O43520 1251 aa16.21■□□□□ 0.19
SCNN1A-201ENST00000228916 ZNF790Q6PG37 636 aa16.21■□□□□ 0.19
SCNN1A-201ENST00000228916 COPS6Q7L5N1 327 aa16.21■□□□□ 0.19
SCNN1A-201ENST00000228916 ADAMTS7Q9UKP4 1686 aa16.21■□□□□ 0.19
SCNN1A-201ENST00000228916 PPFIA3O75145 1194 aa16.21■□□□□ 0.19
SCNN1A-201ENST00000228916 ZNF202O95125 648 aa16.21■□□□□ 0.19
SCNN1A-201ENST00000228916 SF3A1Q15459 793 aaKnown RBP16.21■□□□□ 0.19
SCNN1A-201ENST00000228916 TICAM2Q86XR7 235 aa16.21■□□□□ 0.19
SCNN1A-201ENST00000228916 EFCAB8A8MWE9 144 aa16.21■□□□□ 0.18
SCNN1A-201ENST00000228916 SPTLC2O15270 562 aa16.21■□□□□ 0.18
SCNN1A-201ENST00000228916 LMTK3Q96Q04 1460 aa16.21■□□□□ 0.18
SCNN1A-201ENST00000228916 BIN1O00499 593 aa16.2■□□□□ 0.18
SCNN1A-201ENST00000228916 PIP4K2AP48426 406 aaPredicted RBP16.2■□□□□ 0.18
SCNN1A-201ENST00000228916 HNRNPH2P55795 449 aaKnown RBP16.2■□□□□ 0.18
SCNN1A-201ENST00000228916 REXO1L1PQ8IX06 675 aa16.2■□□□□ 0.18
SCNN1A-201ENST00000228916 FMNL2Q96PY5 1086 aa16.2■□□□□ 0.18
SCNN1A-201ENST00000228916 A0A0G2JLW4 131 aa16.2■□□□□ 0.18
SCNN1A-201ENST00000228916 LMOD1P29536 600 aaPredicted RBP16.2■□□□□ 0.18
SCNN1A-201ENST00000228916 GORABQ5T7V8 394 aa16.2■□□□□ 0.18
SCNN1A-201ENST00000228916 TPM1P09493 284 aa16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 LRRFIP1Q32MZ4 808 aaKnown RBP16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 ZMYM1Q5SVZ6 1142 aa16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 AXDND1Q5T1B0 1012 aaPredicted RBP16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 FCHSD1Q86WN1 690 aa16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 MNS1Q8NEH6 495 aa16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 PARP3Q9Y6F1 533 aa16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 CAMTA1Q9Y6Y1 1673 aa16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 HSPD1P10809 573 aaKnown RBP16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 ATP1A3P13637 1013 aa16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 CMA1P23946 247 aa16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 CCDC158Q5M9N0 1113 aa16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 MYSM1Q5VVJ2 828 aa16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 BRAPQ7Z569 592 aa16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 NAP1L2Q9ULW6 460 aaPredicted RBP16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 CAPN2P17655 700 aa16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 TEX35Q5T0J7 233 aa16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 FBXO18Q8NFZ0 1043 aa16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 ORAI2Q96SN7 254 aa16.19■□□□□ 0.18
SCNN1A-201ENST00000228916 OTUD7BQ6GQQ9 843 aa16.18■□□□□ 0.18
SCNN1A-201ENST00000228916 LRP10Q7Z4F1 713 aa16.18■□□□□ 0.18
SCNN1A-201ENST00000228916 TUBE1Q9UJT0 475 aa16.18■□□□□ 0.18
SCNN1A-201ENST00000228916 RGPD5Q99666 1765 aa16.18■□□□□ 0.18
SCNN1A-201ENST00000228916 POLR3DP05423 398 aaPredicted RBP16.18■□□□□ 0.18
SCNN1A-201ENST00000228916 PFKFB1P16118 471 aa16.18■□□□□ 0.18
SCNN1A-201ENST00000228916 LMOD2Q6P5Q4 547 aa16.18■□□□□ 0.18
SCNN1A-201ENST00000228916 CHST3Q7LGC8 479 aa16.18■□□□□ 0.18
SCNN1A-201ENST00000228916 NFATC2IPQ8NCF5 419 aa16.18■□□□□ 0.18
SCNN1A-201ENST00000228916 C8orf76Q96K31 380 aa16.18■□□□□ 0.18
SCNN1A-201ENST00000228916 CARD6Q9BX69 1037 aa16.18■□□□□ 0.18
SCNN1A-201ENST00000228916 SLIT3O75094 1523 aa16.18■□□□□ 0.18
SCNN1A-201ENST00000228916 CBFA2T2O43439 604 aa16.17■□□□□ 0.18
SCNN1A-201ENST00000228916 URI1O94763 535 aaPredicted RBP16.17■□□□□ 0.18
SCNN1A-201ENST00000228916 UBE3BQ7Z3V4 1068 aa16.17■□□□□ 0.18
SCNN1A-201ENST00000228916 PAG1Q9NWQ8 432 aa16.17■□□□□ 0.18
SCNN1A-201ENST00000228916 ANKRD13DQ6ZTN6 518 aa16.17■□□□□ 0.18
SCNN1A-201ENST00000228916 DPF2Q92785 391 aa16.17■□□□□ 0.18
SCNN1A-201ENST00000228916 CCDC9Q9Y3X0 531 aaKnown RBP16.17■□□□□ 0.18
SCNN1A-201ENST00000228916 KDM6AO15550 1401 aaPredicted RBP16.17■□□□□ 0.18
SCNN1A-201ENST00000228916 GOLIM4O00461 696 aa16.17■□□□□ 0.18
SCNN1A-201ENST00000228916 CDK11BP21127 795 aaKnown RBP16.17■□□□□ 0.18
SCNN1A-201ENST00000228916 UBASH3AP57075 661 aa16.17■□□□□ 0.18
SCNN1A-201ENST00000228916 VSTM4Q8IW00 320 aa16.17■□□□□ 0.18
SCNN1A-201ENST00000228916 ZNF496Q96IT1 587 aaPredicted RBP16.17■□□□□ 0.18
SCNN1A-201ENST00000228916 SLC52A2Q9HAB3 445 aa16.17■□□□□ 0.18
SCNN1A-201ENST00000228916 TBC1D8O95759 1140 aa16.16■□□□□ 0.18
SCNN1A-201ENST00000228916 ANO1Q5XXA6 986 aa16.16■□□□□ 0.18
SCNN1A-201ENST00000228916 MPHOSPH8Q99549 860 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms