RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 CFAP58Q5T655 872 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 CCDC114Q96M63 670 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 GPCPD1Q9NPB8 672 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 FAM169AQ9Y6X4 670 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 RTL1A6NKG5 1358 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 RNF113AO15541 343 aaKnown RBP14.97□□□□□ -0.01
COL1A1-201ENST00000225964 RNF34Q969K3 372 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 TACC1O75410 805 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 HS2ST1Q7LGA3 356 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 TRERF1Q96PN7 1200 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 STK32BQ9NY57 414 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 DISP3Q9P2K9 1392 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 TRIM75PA6NK02 468 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 UBXN1Q04323 297 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 CCDC77Q9BR77 488 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 ZKSCAN3Q9BRR0 538 aa14.97□□□□□ -0.01
COL1A1-201ENST00000225964 BICDL2A1A5D9 508 aa14.96□□□□□ -0.01
COL1A1-201ENST00000225964 RXRAP19793 462 aa14.96□□□□□ -0.01
COL1A1-201ENST00000225964 TFCP2Q12800 502 aa14.96□□□□□ -0.01
COL1A1-201ENST00000225964 TIGD1Q96MW7 591 aa14.96□□□□□ -0.01
COL1A1-201ENST00000225964 LMTK3Q96Q04 1460 aa14.96□□□□□ -0.01
COL1A1-201ENST00000225964 SMIM23A6NLE4 172 aa14.96□□□□□ -0.01
COL1A1-201ENST00000225964 ZSCAN23Q3MJ62 389 aa14.96□□□□□ -0.01
COL1A1-201ENST00000225964 GPHNQ9NQX3 736 aaPredicted RBP14.96□□□□□ -0.01
COL1A1-201ENST00000225964 CHMP2AO43633 222 aa14.96□□□□□ -0.01
COL1A1-201ENST00000225964 NUCB1Q02818 461 aa14.96□□□□□ -0.01
COL1A1-201ENST00000225964 APOBRQ0VD83 1088 aa14.96□□□□□ -0.02
COL1A1-201ENST00000225964 CCDC14Q49A88 953 aa14.96□□□□□ -0.02
COL1A1-201ENST00000225964 ALDH1L1O75891 902 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 SH2D4AQ9H788 454 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 UFL1O94874 794 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 CAPZA3Q96KX2 299 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 IL16Q14005 1332 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 GNA11P29992 359 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 DTHD1Q6ZMT9 781 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 RASA3Q14644 834 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 NCKAP5LQ9HCH0 1330 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 KRT9P35527 623 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 RAPGEF1Q13905 1077 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 ESYT1Q9BSJ8 1104 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 CTAGE15A4D2H0 777 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 CTAGE8P0CG41 777 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 CCDC6Q16204 474 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 CTAGE6Q86UF2 777 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 CTAGE4Q8IX94 777 aa14.95□□□□□ -0.02
COL1A1-201ENST00000225964 RBM28Q9NW13 759 aaKnown RBP14.95□□□□□ -0.02
COL1A1-201ENST00000225964 SPAG1Q07617 926 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 ZYXQ15942 572 aaKnown RBP14.94□□□□□ -0.02
COL1A1-201ENST00000225964 AGTPBP1Q9UPW5 1226 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 FRMD4BQ9Y2L6 1034 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 ATP6V0A2Q9Y487 856 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 HCLS1P14317 486 aaPredicted RBP14.94□□□□□ -0.02
COL1A1-201ENST00000225964 PPP1R7Q15435 360 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 FNBP1Q96RU3 617 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 HAUS7Q99871 368 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 STMN4Q9H169 189 aaPredicted RBP14.94□□□□□ -0.02
COL1A1-201ENST00000225964 KDM5BQ9UGL1 1544 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 EIF6P56537 245 aaKnown RBP14.94□□□□□ -0.02
COL1A1-201ENST00000225964 STX17P56962 302 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 UVSSAQ2YD98 709 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 PRXQ9BXM0 1461 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 CCDC171Q6TFL3 1326 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 IGHDP01880 384 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 USP48Q86UV5 1035 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 TEX11Q8IYF3 940 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 ANAPC4Q9UJX5 808 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 CCDC169A6NNP5 214 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 TPD52P55327 224 aaPredicted RBP14.94□□□□□ -0.02
COL1A1-201ENST00000225964 PRKG1Q13976 671 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 WDR44Q5JSH3 913 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 CCDC65Q8IXS2 484 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 CNBD1Q8NA66 436 aa14.94□□□□□ -0.02
COL1A1-201ENST00000225964 SRRTQ9BXP5 876 aaKnown RBP14.94□□□□□ -0.02
COL1A1-201ENST00000225964 ZBTB16Q05516 673 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 BIRC3Q13489 604 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 BEGAINQ9BUH8 593 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 PCDH11XQ9BZA7 1347 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 PCDH11YQ9BZA8 1340 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 CRCPO75575 148 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 CCDC25Q86WR0 208 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 CFAP57Q96MR6 1250 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 ARHGEF10LQ9HCE6 1279 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 HMGXB3Q12766 1538 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 ATP8B2P98198 1209 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 CCDC129Q6ZRS4 1044 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 CTAGE9A4FU28 777 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 ATP2A2P16615 1042 aaKnown RBP14.93□□□□□ -0.02
COL1A1-201ENST00000225964 GRIN2AQ12879 1464 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 PLCH2O75038 1416 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 PDE1AP54750 535 aa14.93□□□□□ -0.02
COL1A1-201ENST00000225964 CWF19L2Q2TBE0 894 aaKnown RBP14.93□□□□□ -0.02
COL1A1-201ENST00000225964 ZNF830Q96NB3 372 aaPredicted RBP14.93□□□□□ -0.02
COL1A1-201ENST00000225964 MYCLP12524 364 aaPredicted RBP14.92□□□□□ -0.02
COL1A1-201ENST00000225964 SMC1BQ8NDV3 1235 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 KIAA1524Q8TCG1 905 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 DENND2AQ9ULE3 1009 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 BTG4Q9NY30 223 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 RIMS2Q9UQ26 1411 aa14.92□□□□□ -0.02
COL1A1-201ENST00000225964 NOP56O00567 594 aaKnown RBP14.92□□□□□ -0.02
COL1A1-201ENST00000225964 SPTLC2O15270 562 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms