RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 CBX8Q9HC52 389 aa25.75■■□□□ 1.71
SMARCD2-201ENST00000225742 CNNM1Q9NRU3 951 aa25.75■■□□□ 1.71
SMARCD2-201ENST00000225742 SPTLC3Q9NUV7 552 aa25.75■■□□□ 1.71
SMARCD2-201ENST00000225742 NUP98P52948 1817 aa25.75■■□□□ 1.71
SMARCD2-201ENST00000225742 ZNF213O14771 459 aa25.74■■□□□ 1.71
SMARCD2-201ENST00000225742 GPAA1O43292 621 aa25.74■■□□□ 1.71
SMARCD2-201ENST00000225742 UQCRFS1P1P0C7P4 283 aa25.74■■□□□ 1.71
SMARCD2-201ENST00000225742 ADD2P35612 726 aa25.74■■□□□ 1.71
SMARCD2-201ENST00000225742 VGLL2Q8N8G2 317 aa25.74■■□□□ 1.71
SMARCD2-201ENST00000225742 NCOA5Q9HCD5 579 aaKnown RBP25.74■■□□□ 1.71
SMARCD2-201ENST00000225742 NAP1L2Q9ULW6 460 aaPredicted RBP25.74■■□□□ 1.71
SMARCD2-201ENST00000225742 IL6STP40189 918 aaPredicted RBP25.74■■□□□ 1.71
SMARCD2-201ENST00000225742 PLCB2Q00722 1185 aa25.74■■□□□ 1.71
SMARCD2-201ENST00000225742 NOLC1Q14978 699 aaKnown RBP eCLIP25.74■■□□□ 1.71
SMARCD2-201ENST00000225742 UBE3CQ15386 1083 aa25.74■■□□□ 1.71
SMARCD2-201ENST00000225742 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.74■■□□□ 1.71
SMARCD2-201ENST00000225742 RALYLQ86SE5 291 aaKnown RBP25.74■■□□□ 1.71
SMARCD2-201ENST00000225742 CCDC85AQ96PX6 553 aaPredicted RBP25.74■■□□□ 1.71
SMARCD2-201ENST00000225742 PUS7LQ9H0K6 701 aaKnown RBP25.74■■□□□ 1.71
SMARCD2-201ENST00000225742 MCAMP43121 646 aa25.73■■□□□ 1.71
SMARCD2-201ENST00000225742 CCDC73Q6ZRK6 1079 aa25.73■■□□□ 1.71
SMARCD2-201ENST00000225742 CCAR1Q8IX12 1150 aaKnown RBP25.73■■□□□ 1.71
SMARCD2-201ENST00000225742 LRP5O75197 1615 aa25.73■■□□□ 1.71
SMARCD2-201ENST00000225742 ARAP2Q8WZ64 1704 aa25.73■■□□□ 1.71
SMARCD2-201ENST00000225742 GPTP24298 496 aa25.72■■□□□ 1.71
SMARCD2-201ENST00000225742 TTC12Q9H892 705 aaPredicted RBP25.72■■□□□ 1.71
SMARCD2-201ENST00000225742 TRMT112Q9UI30 125 aaKnown RBP25.72■■□□□ 1.71
SMARCD2-201ENST00000225742 PDE8BO95263 885 aa25.72■■□□□ 1.71
SMARCD2-201ENST00000225742 FDPSP14324 419 aaKnown RBP25.72■■□□□ 1.71
SMARCD2-201ENST00000225742 ARID4AP29374 1257 aaPredicted RBP25.72■■□□□ 1.71
SMARCD2-201ENST00000225742 CHST3Q7LGC8 479 aa25.72■■□□□ 1.71
SMARCD2-201ENST00000225742 USP28Q96RU2 1077 aa25.72■■□□□ 1.71
SMARCD2-201ENST00000225742 RTEL1Q9NZ71 1219 aa25.72■■□□□ 1.71
SMARCD2-201ENST00000225742 WNK3Q9BYP7 1800 aa25.71■■□□□ 1.71
SMARCD2-201ENST00000225742 MROH5Q6ZUA9 1318 aa25.71■■□□□ 1.71
SMARCD2-201ENST00000225742 EXOC5O00471 708 aa25.7■■□□□ 1.71
SMARCD2-201ENST00000225742 HAND2P61296 217 aa25.7■■□□□ 1.71
SMARCD2-201ENST00000225742 LUZP1Q86V48 1076 aa25.7■■□□□ 1.71
SMARCD2-201ENST00000225742 ZNF34Q8IZ26 560 aa25.7■■□□□ 1.71
SMARCD2-201ENST00000225742 ZNF830Q96NB3 372 aaPredicted RBP25.7■■□□□ 1.71
SMARCD2-201ENST00000225742 SLC4A9Q96Q91 983 aa25.7■■□□□ 1.71
SMARCD2-201ENST00000225742 KLF18A0A0U1RQI7 1052 aa25.7■■□□□ 1.7
SMARCD2-201ENST00000225742 ZNF165P49910 485 aa25.7■■□□□ 1.7
SMARCD2-201ENST00000225742 FAM160A1Q05DH4 1040 aa25.7■■□□□ 1.7
SMARCD2-201ENST00000225742 TRDNQ13061 729 aa25.7■■□□□ 1.7
SMARCD2-201ENST00000225742 BRAPQ7Z569 592 aa25.7■■□□□ 1.7
SMARCD2-201ENST00000225742 TBC1D2BQ9UPU7 963 aa25.7■■□□□ 1.7
SMARCD2-201ENST00000225742 A0A1W2PQ27 194 aa25.69■■□□□ 1.7
SMARCD2-201ENST00000225742 A0A1W2PQ64 194 aa25.69■■□□□ 1.7
SMARCD2-201ENST00000225742 A0A1W2PQD8 194 aa25.69■■□□□ 1.7
SMARCD2-201ENST00000225742 ANTXR2P58335 489 aa25.69■■□□□ 1.7
SMARCD2-201ENST00000225742 ILDR1Q86SU0 546 aaPredicted RBP25.69■■□□□ 1.7
SMARCD2-201ENST00000225742 SYNE4Q8N205 404 aa25.69■■□□□ 1.7
SMARCD2-201ENST00000225742 C8orf76Q96K31 380 aa25.69■■□□□ 1.7
SMARCD2-201ENST00000225742 HPS5Q9UPZ3 1129 aa25.69■■□□□ 1.7
SMARCD2-201ENST00000225742 ZBTB1Q9Y2K1 713 aa25.69■■□□□ 1.7
SMARCD2-201ENST00000225742 GOLGA8BA8MQT2 603 aa25.68■■□□□ 1.7
SMARCD2-201ENST00000225742 DYNC1I1O14576 645 aa25.68■■□□□ 1.7
SMARCD2-201ENST00000225742 HSP90AA2PQ14568 343 aaPredicted RBP25.68■■□□□ 1.7
SMARCD2-201ENST00000225742 PUM3Q15397 648 aaKnown RBP25.68■■□□□ 1.7
SMARCD2-201ENST00000225742 STX1AQ16623 288 aa25.68■■□□□ 1.7
SMARCD2-201ENST00000225742 ENGASEQ8NFI3 743 aa25.68■■□□□ 1.7
SMARCD2-201ENST00000225742 PRIMPOLQ96LW4 560 aa25.68■■□□□ 1.7
SMARCD2-201ENST00000225742 ZMYM6O95789 1325 aa25.68■■□□□ 1.7
SMARCD2-201ENST00000225742 COL22A1Q8NFW1 1626 aaPredicted RBP25.68■■□□□ 1.7
SMARCD2-201ENST00000225742 KINO60870 393 aaKnown RBP25.67■■□□□ 1.7
SMARCD2-201ENST00000225742 FOSBP53539 338 aa25.67■■□□□ 1.7
SMARCD2-201ENST00000225742 CEBPZQ03701 1054 aaKnown RBP25.67■■□□□ 1.7
SMARCD2-201ENST00000225742 ALX1Q15699 326 aa25.67■■□□□ 1.7
SMARCD2-201ENST00000225742 SLC9C2Q5TAH2 1124 aa25.67■■□□□ 1.7
SMARCD2-201ENST00000225742 PLA2G4DQ86XP0 818 aa25.67■■□□□ 1.7
SMARCD2-201ENST00000225742 DZIP3Q86Y13 1208 aaKnown RBP25.67■■□□□ 1.7
SMARCD2-201ENST00000225742 LPIN2Q92539 896 aa25.67■■□□□ 1.7
SMARCD2-201ENST00000225742 UQCRHLA0A096LP55 91 aa25.67■■□□□ 1.7
SMARCD2-201ENST00000225742 UQCRHP07919 91 aa25.67■■□□□ 1.7
SMARCD2-201ENST00000225742 ZNF75DP51815 510 aa25.67■■□□□ 1.7
SMARCD2-201ENST00000225742 PI16Q6UXB8 463 aa25.67■■□□□ 1.7
SMARCD2-201ENST00000225742 FBXO18Q8NFZ0 1043 aa25.67■■□□□ 1.7
SMARCD2-201ENST00000225742 KIAA1524Q8TCG1 905 aa25.67■■□□□ 1.7
SMARCD2-201ENST00000225742 CPLX1O14810 134 aa25.66■■□□□ 1.7
SMARCD2-201ENST00000225742 YEATS4O95619 227 aa25.66■■□□□ 1.7
SMARCD2-201ENST00000225742 CDC25BP30305 580 aa25.66■■□□□ 1.7
SMARCD2-201ENST00000225742 SNW1Q13573 536 aaKnown RBP25.66■■□□□ 1.7
SMARCD2-201ENST00000225742 CCDC102BQ68D86 513 aa25.66■■□□□ 1.7
SMARCD2-201ENST00000225742 ADALQ6DHV7 355 aa25.66■■□□□ 1.7
SMARCD2-201ENST00000225742 CDCA7Q9BWT1 371 aaPredicted RBP25.66■■□□□ 1.7
SMARCD2-201ENST00000225742 ORC3Q9UBD5 711 aaPredicted RBP25.66■■□□□ 1.7
SMARCD2-201ENST00000225742 C4AP0C0L4 1744 aa25.66■■□□□ 1.7
SMARCD2-201ENST00000225742 C4BP0C0L5 1744 aa25.66■■□□□ 1.7
SMARCD2-201ENST00000225742 FGFR2P21802 821 aa25.65■■□□□ 1.7
SMARCD2-201ENST00000225742 ME1P48163 572 aa25.65■■□□□ 1.7
SMARCD2-201ENST00000225742 KCNG4Q8TDN1 519 aa25.65■■□□□ 1.7
SMARCD2-201ENST00000225742 DNAJC25Q9H1X3 360 aa25.65■■□□□ 1.7
SMARCD2-201ENST00000225742 GOLPH3LQ9H4A5 285 aa25.65■■□□□ 1.7
SMARCD2-201ENST00000225742 PIH1D3Q9NQM4 214 aaKnown RBP25.65■■□□□ 1.7
SMARCD2-201ENST00000225742 GPHNQ9NQX3 736 aaPredicted RBP25.65■■□□□ 1.7
SMARCD2-201ENST00000225742 POLR3EQ9NVU0 708 aa25.65■■□□□ 1.7
SMARCD2-201ENST00000225742 DNTTIP2Q5QJE6 756 aaKnown RBP25.65■■□□□ 1.7
SMARCD2-201ENST00000225742 SARM1Q6SZW1 724 aa25.65■■□□□ 1.7
SMARCD2-201ENST00000225742 MPNDQ8N594 471 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms