RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 UBE2HP62256 183 aa21.07■□□□□ 0.96
CLIP2-201ENST00000223398 TRIM75PA6NK02 468 aa21.06■□□□□ 0.96
CLIP2-201ENST00000223398 MAP3K9P80192 1104 aa21.06■□□□□ 0.96
CLIP2-201ENST00000223398 BCS1LQ9Y276 419 aa21.06■□□□□ 0.96
CLIP2-201ENST00000223398 ZBTB40Q9NUA8 1239 aa21.06■□□□□ 0.96
CLIP2-201ENST00000223398 EIF3JO75822 258 aaKnown RBP21.06■□□□□ 0.96
CLIP2-201ENST00000223398 DPH6Q7L8W6 267 aa21.06■□□□□ 0.96
CLIP2-201ENST00000223398 SYNCQ9H7C4 482 aa21.06■□□□□ 0.96
CLIP2-201ENST00000223398 KRT2P35908 639 aa21.06■□□□□ 0.96
CLIP2-201ENST00000223398 RMND1Q9NWS8 449 aa21.06■□□□□ 0.96
CLIP2-201ENST00000223398 SUCLG2Q96I99 432 aa21.05■□□□□ 0.96
CLIP2-201ENST00000223398 B4E1Z4 1266 aa21.05■□□□□ 0.96
CLIP2-201ENST00000223398 BMP15O95972 392 aa21.05■□□□□ 0.96
CLIP2-201ENST00000223398 AK2P54819 239 aa21.05■□□□□ 0.96
CLIP2-201ENST00000223398 ZFYVE16Q7Z3T8 1539 aa21.05■□□□□ 0.96
CLIP2-201ENST00000223398 CPA1P15085 419 aa21.05■□□□□ 0.96
CLIP2-201ENST00000223398 EAPPQ56P03 285 aaPredicted RBP21.05■□□□□ 0.96
CLIP2-201ENST00000223398 YEATS2Q9ULM3 1422 aa21.05■□□□□ 0.96
CLIP2-201ENST00000223398 UQCRHLA0A096LP55 91 aa21.04■□□□□ 0.96
CLIP2-201ENST00000223398 UQCRHP07919 91 aa21.04■□□□□ 0.96
CLIP2-201ENST00000223398 FCHSD1Q86WN1 690 aa21.04■□□□□ 0.96
CLIP2-201ENST00000223398 KCNG4Q8TDN1 519 aa21.04■□□□□ 0.96
CLIP2-201ENST00000223398 PZPP20742 1482 aa21.04■□□□□ 0.96
CLIP2-201ENST00000223398 KRT13P13646 458 aa21.04■□□□□ 0.96
CLIP2-201ENST00000223398 KRT79Q5XKE5 535 aa21.04■□□□□ 0.96
CLIP2-201ENST00000223398 PLEKHM2Q8IWE5 1019 aa21.04■□□□□ 0.96
CLIP2-201ENST00000223398 PIK3C2GO75747 1445 aa21.04■□□□□ 0.96
CLIP2-201ENST00000223398 CALML3P27482 149 aa21.04■□□□□ 0.96
CLIP2-201ENST00000223398 TMOD4Q9NZQ9 345 aa21.04■□□□□ 0.96
CLIP2-201ENST00000223398 DNM1Q05193 864 aaKnown RBP21.03■□□□□ 0.96
CLIP2-201ENST00000223398 FAM182BQ5T319 152 aa21.03■□□□□ 0.96
CLIP2-201ENST00000223398 DHX32Q7L7V1 743 aaKnown RBP21.03■□□□□ 0.96
CLIP2-201ENST00000223398 IL27Q8NEV9 243 aa21.03■□□□□ 0.96
CLIP2-201ENST00000223398 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
CLIP2-201ENST00000223398 ESPNB1AK53 854 aa21.03■□□□□ 0.96
CLIP2-201ENST00000223398 SPAG5Q96R06 1193 aa21.03■□□□□ 0.96
CLIP2-201ENST00000223398 GPR162Q16538 588 aa21.03■□□□□ 0.96
CLIP2-201ENST00000223398 QTRT2Q9H974 415 aaKnown RBP21.03■□□□□ 0.96
CLIP2-201ENST00000223398 PTPDC1A2A3K4 754 aa21.03■□□□□ 0.96
CLIP2-201ENST00000223398 CHMLP26374 656 aa21.03■□□□□ 0.96
CLIP2-201ENST00000223398 PSMD1Q99460 953 aa21.03■□□□□ 0.96
CLIP2-201ENST00000223398 CWC15Q9P013 229 aaKnown RBP21.03■□□□□ 0.96
CLIP2-201ENST00000223398 EZRP15311 586 aaKnown RBP21.02■□□□□ 0.96
CLIP2-201ENST00000223398 RGS22Q8NE09 1264 aa21.02■□□□□ 0.96
CLIP2-201ENST00000223398 OTUD7AQ8TE49 926 aaPredicted RBP21.02■□□□□ 0.96
CLIP2-201ENST00000223398 MRPS27Q92552 414 aaKnown RBP21.02■□□□□ 0.96
CLIP2-201ENST00000223398 FAM13AO94988 1023 aa21.02■□□□□ 0.96
CLIP2-201ENST00000223398 PAFAH1B1P43034 410 aa21.02■□□□□ 0.96
CLIP2-201ENST00000223398 SH2D4AQ9H788 454 aa21.02■□□□□ 0.96
CLIP2-201ENST00000223398 PPIP5K2O43314 1243 aa21.02■□□□□ 0.96
CLIP2-201ENST00000223398 KCNQ3O43525 872 aa21.02■□□□□ 0.96
CLIP2-201ENST00000223398 GNA11P29992 359 aa21.02■□□□□ 0.96
CLIP2-201ENST00000223398 NIM1KQ8IY84 436 aa21.02■□□□□ 0.96
CLIP2-201ENST00000223398 TMEM94Q12767 1356 aa21.02■□□□□ 0.95
CLIP2-201ENST00000223398 PER1O15534 1290 aaPredicted RBP21.01■□□□□ 0.95
CLIP2-201ENST00000223398 MRVI1Q9Y6F6 885 aa21.01■□□□□ 0.95
CLIP2-201ENST00000223398 CHL1O00533 1208 aa21.01■□□□□ 0.95
CLIP2-201ENST00000223398 HOOK3Q86VS8 718 aa21.01■□□□□ 0.95
CLIP2-201ENST00000223398 PLCD3Q8N3E9 789 aa21.01■□□□□ 0.95
CLIP2-201ENST00000223398 GCKRQ14397 625 aa21■□□□□ 0.95
CLIP2-201ENST00000223398 USP48Q86UV5 1035 aa21■□□□□ 0.95
CLIP2-201ENST00000223398 ZNF354CQ86Y25 554 aa21■□□□□ 0.95
CLIP2-201ENST00000223398 HELLSQ9NRZ9 838 aa21■□□□□ 0.95
CLIP2-201ENST00000223398 ZBTB7BO15156 539 aaPredicted RBP21■□□□□ 0.95
CLIP2-201ENST00000223398 ADCY5O95622 1261 aa21■□□□□ 0.95
CLIP2-201ENST00000223398 NCBP1Q09161 790 aaKnown RBP21■□□□□ 0.95
CLIP2-201ENST00000223398 MAPKAPK5Q8IW41 473 aa21■□□□□ 0.95
CLIP2-201ENST00000223398 CRACR2AQ9BSW2 395 aa21■□□□□ 0.95
CLIP2-201ENST00000223398 DNMT1P26358 1616 aaKnown RBP21■□□□□ 0.95
CLIP2-201ENST00000223398 CHMP2AO43633 222 aa21■□□□□ 0.95
CLIP2-201ENST00000223398 AKR1B10O60218 316 aa21■□□□□ 0.95
CLIP2-201ENST00000223398 LETM2Q2VYF4 491 aa21■□□□□ 0.95
CLIP2-201ENST00000223398 ALS2CR12Q96Q35 445 aa21■□□□□ 0.95
CLIP2-201ENST00000223398 SPTLC2O15270 562 aa20.99■□□□□ 0.95
CLIP2-201ENST00000223398 WDR66Q8TBY9 1149 aa20.99■□□□□ 0.95
CLIP2-201ENST00000223398 ARHGEF10LQ9HCE6 1279 aa20.99■□□□□ 0.95
CLIP2-201ENST00000223398 TRIM35Q9UPQ4 493 aa20.99■□□□□ 0.95
CLIP2-201ENST00000223398 RUFY3Q7L099 469 aa20.99■□□□□ 0.95
CLIP2-201ENST00000223398 USP37Q86T82 979 aa20.99■□□□□ 0.95
CLIP2-201ENST00000223398 FNBP4Q8N3X1 1017 aaPredicted RBP20.99■□□□□ 0.95
CLIP2-201ENST00000223398 TBC1D5Q92609 795 aa20.99■□□□□ 0.95
CLIP2-201ENST00000223398 COMMD10Q9Y6G5 202 aa20.99■□□□□ 0.95
CLIP2-201ENST00000223398 MTERF4Q7Z6M4 381 aaKnown RBP20.99■□□□□ 0.95
CLIP2-201ENST00000223398 KIF18AQ8NI77 898 aa20.99■□□□□ 0.95
CLIP2-201ENST00000223398 C16orf45Q96MC5 204 aaPredicted RBP20.99■□□□□ 0.95
CLIP2-201ENST00000223398 F13A1P00488 732 aa20.99■□□□□ 0.95
CLIP2-201ENST00000223398 EIF4A1P60842 406 aaKnown RBP20.99■□□□□ 0.95
CLIP2-201ENST00000223398 PLEKHG3A1L390 1219 aa20.98■□□□□ 0.95
CLIP2-201ENST00000223398 ARID5AQ03989 594 aa20.98■□□□□ 0.95
CLIP2-201ENST00000223398 DYDC1Q8WWB3 177 aa20.98■□□□□ 0.95
CLIP2-201ENST00000223398 LPIN2Q92539 896 aa20.98■□□□□ 0.95
CLIP2-201ENST00000223398 CFAP43Q8NDM7 1665 aa20.98■□□□□ 0.95
CLIP2-201ENST00000223398 CPXCR1Q8N123 301 aa20.98■□□□□ 0.95
CLIP2-201ENST00000223398 DACT1Q9NYF0 836 aa20.98■□□□□ 0.95
CLIP2-201ENST00000223398 GPAA1O43292 621 aa20.98■□□□□ 0.95
CLIP2-201ENST00000223398 IFFO1Q0D2I5 559 aa20.98■□□□□ 0.95
CLIP2-201ENST00000223398 ERVV-2B6SEH9 535 aa20.97■□□□□ 0.95
CLIP2-201ENST00000223398 PSMA7O14818 248 aa20.97■□□□□ 0.95
CLIP2-201ENST00000223398 HOXB7P09629 217 aa20.97■□□□□ 0.95
CLIP2-201ENST00000223398 ZNF174Q15697 407 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms