RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 E9PSI1 815 aa20.07■□□□□ 0.8
ERCC1-201ENST00000013807 NBPF7P0C2Y1 421 aaPredicted RBP20.07■□□□□ 0.8
ERCC1-201ENST00000013807 NF2P35240 595 aa20.07■□□□□ 0.8
ERCC1-201ENST00000013807 SLC4A10Q6U841 1118 aa20.07■□□□□ 0.8
ERCC1-201ENST00000013807 MOB2Q70IA6 237 aa20.07■□□□□ 0.8
ERCC1-201ENST00000013807 ARAP2Q8WZ64 1704 aa20.07■□□□□ 0.8
ERCC1-201ENST00000013807 FAM205AQ6ZU69 1335 aa20.06■□□□□ 0.8
ERCC1-201ENST00000013807 TRPA1O75762 1119 aa20.06■□□□□ 0.8
ERCC1-201ENST00000013807 PRAMEF18Q5VWM3 479 aa20.06■□□□□ 0.8
ERCC1-201ENST00000013807 SUCLG2Q96I99 432 aa20.06■□□□□ 0.8
ERCC1-201ENST00000013807 CNNM1Q9NRU3 951 aa20.06■□□□□ 0.8
ERCC1-201ENST00000013807 RIPOR2Q9Y4F9 1068 aa20.06■□□□□ 0.8
ERCC1-201ENST00000013807 UBE2Q2LH0YL09 131 aa20.05■□□□□ 0.8
ERCC1-201ENST00000013807 TM4SF4P48230 202 aa20.05■□□□□ 0.8
ERCC1-201ENST00000013807 DLGAP5Q15398 846 aa20.05■□□□□ 0.8
ERCC1-201ENST00000013807 TAF7LQ5H9L4 462 aa20.05■□□□□ 0.8
ERCC1-201ENST00000013807 LDLRAD1Q5T700 205 aa20.05■□□□□ 0.8
ERCC1-201ENST00000013807 TDRD7Q8NHU6 1098 aaKnown RBP20.05■□□□□ 0.8
ERCC1-201ENST00000013807 PPP2R3BQ9Y5P8 575 aa20.05■□□□□ 0.8
ERCC1-201ENST00000013807 UNCXA6NJT0 531 aa20.04■□□□□ 0.8
ERCC1-201ENST00000013807 SLFN5Q08AF3 891 aa20.04■□□□□ 0.8
ERCC1-201ENST00000013807 MAP3K11Q16584 847 aa20.04■□□□□ 0.8
ERCC1-201ENST00000013807 SPDYE2BA6NHP3 402 aa20.03■□□□□ 0.8
ERCC1-201ENST00000013807 SPDYE6P0CI01 402 aa20.03■□□□□ 0.8
ERCC1-201ENST00000013807 DGKZQ13574 1117 aa20.03■□□□□ 0.8
ERCC1-201ENST00000013807 NOM1Q5C9Z4 860 aaKnown RBP20.03■□□□□ 0.8
ERCC1-201ENST00000013807 FAM84BQ96KN1 310 aaPredicted RBP20.03■□□□□ 0.8
ERCC1-201ENST00000013807 DEFB129Q9H1M3 183 aa20.03■□□□□ 0.8
ERCC1-201ENST00000013807 MROH5Q6ZUA9 1318 aa20.02■□□□□ 0.8
ERCC1-201ENST00000013807 ARMC9Q7Z3E5 817 aa20.02■□□□□ 0.8
ERCC1-201ENST00000013807 TRMT2AQ8IZ69 625 aaKnown RBP20.02■□□□□ 0.8
ERCC1-201ENST00000013807 SSH1Q8WYL5 1049 aa20.02■□□□□ 0.8
ERCC1-201ENST00000013807 PRMT6Q96LA8 375 aaPredicted RBP20.02■□□□□ 0.8
ERCC1-201ENST00000013807 PUS3Q9BZE2 481 aaKnown RBP20.02■□□□□ 0.8
ERCC1-201ENST00000013807 BICC1Q9H694 974 aaKnown RBP20.02■□□□□ 0.8
ERCC1-201ENST00000013807 PLIN1O60240 522 aa20.01■□□□□ 0.79
ERCC1-201ENST00000013807 HIBADHP31937 336 aaKnown RBP20.01■□□□□ 0.79
ERCC1-201ENST00000013807 PTPN12Q05209 780 aaKnown RBP20.01■□□□□ 0.79
ERCC1-201ENST00000013807 ALDH1L2Q3SY69 923 aa20.01■□□□□ 0.79
ERCC1-201ENST00000013807 CFAP100Q494V2 611 aa20.01■□□□□ 0.79
ERCC1-201ENST00000013807 ANKRD44Q8N8A2 993 aa20.01■□□□□ 0.79
ERCC1-201ENST00000013807 CFHR5Q9BXR6 569 aa20.01■□□□□ 0.79
ERCC1-201ENST00000013807 USP44Q9H0E7 712 aa20.01■□□□□ 0.79
ERCC1-201ENST00000013807 CCDC85CA6NKD9 419 aa20■□□□□ 0.79
ERCC1-201ENST00000013807 MYO1BO43795 1136 aa20■□□□□ 0.79
ERCC1-201ENST00000013807 TTLL12Q14166 644 aaPredicted RBP20■□□□□ 0.79
ERCC1-201ENST00000013807 FBXO33Q7Z6M2 555 aa20■□□□□ 0.79
ERCC1-201ENST00000013807 VGLL2Q8N8G2 317 aa20■□□□□ 0.79
ERCC1-201ENST00000013807 SERPINA10Q9UK55 444 aa20■□□□□ 0.79
ERCC1-201ENST00000013807 PCDHAC2Q9Y5I4 1007 aa19.99■□□□□ 0.79
ERCC1-201ENST00000013807 SSC5DA1L4H1 1573 aa19.99■□□□□ 0.79
ERCC1-201ENST00000013807 GYG1P46976 350 aa19.98■□□□□ 0.79
ERCC1-201ENST00000013807 SUPT20HL1Q3ZLR7 823 aa19.98■□□□□ 0.79
ERCC1-201ENST00000013807 MFSD14BQ5SR56 506 aa19.98■□□□□ 0.79
ERCC1-201ENST00000013807 PDE8BO95263 885 aa19.97■□□□□ 0.79
ERCC1-201ENST00000013807 CT47B1P0C2W7 299 aaPredicted RBP19.97■□□□□ 0.79
ERCC1-201ENST00000013807 SREBF2Q12772 1141 aa19.97■□□□□ 0.79
ERCC1-201ENST00000013807 SPRYD7Q5W111 196 aa19.97■□□□□ 0.79
ERCC1-201ENST00000013807 ANGEL1Q9UNK9 670 aaKnown RBP19.97■□□□□ 0.79
ERCC1-201ENST00000013807 MYH13Q9UKX3 1938 aa19.97■□□□□ 0.79
ERCC1-201ENST00000013807 KIF16BQ96L93 1317 aa19.97■□□□□ 0.79
ERCC1-201ENST00000013807 F8W031 263 aaPredicted RBP19.96■□□□□ 0.79
ERCC1-201ENST00000013807 PPP1R12BO60237 982 aaPredicted RBP19.96■□□□□ 0.79
ERCC1-201ENST00000013807 INHBEP58166 350 aa19.96■□□□□ 0.79
ERCC1-201ENST00000013807 LRRC24Q50LG9 513 aa19.96■□□□□ 0.79
ERCC1-201ENST00000013807 CTU1Q7Z7A3 348 aaKnown RBP19.96■□□□□ 0.79
ERCC1-201ENST00000013807 MRIQ9BWK5 157 aa19.96■□□□□ 0.79
ERCC1-201ENST00000013807 AOX1Q06278 1338 aa19.96■□□□□ 0.79
ERCC1-201ENST00000013807 TNRC18O15417 2968 aaPredicted RBP19.95■□□□□ 0.78
ERCC1-201ENST00000013807 ZBTB48P10074 688 aaPredicted RBP19.95■□□□□ 0.78
ERCC1-201ENST00000013807 HDLBPQ00341 1268 aaKnown RBP19.95■□□□□ 0.78
ERCC1-201ENST00000013807 SPDYE2Q495Y8 402 aa19.95■□□□□ 0.78
ERCC1-201ENST00000013807 TTF2Q9UNY4 1162 aaKnown RBP19.95■□□□□ 0.78
ERCC1-201ENST00000013807 JAG2Q9Y219 1238 aa19.95■□□□□ 0.78
ERCC1-201ENST00000013807 PDE4DIPQ5VU43 2346 aa19.94■□□□□ 0.78
ERCC1-201ENST00000013807 OTOFQ9HC10 1997 aa19.94■□□□□ 0.78
ERCC1-201ENST00000013807 MLLT1Q03111 559 aaPredicted RBP19.94■□□□□ 0.78
ERCC1-201ENST00000013807 TNFAIP1Q13829 316 aa19.94■□□□□ 0.78
ERCC1-201ENST00000013807 PKN2Q16513 984 aaKnown RBP19.94■□□□□ 0.78
ERCC1-201ENST00000013807 TBC1D22AQ8WUA7 517 aa19.94■□□□□ 0.78
ERCC1-201ENST00000013807 SLC10A4Q96EP9 437 aa19.94■□□□□ 0.78
ERCC1-201ENST00000013807 CDCA7LQ96GN5 454 aa19.94■□□□□ 0.78
ERCC1-201ENST00000013807 CLRN2A0PK11 232 aa19.93■□□□□ 0.78
ERCC1-201ENST00000013807 ALDH1A1P00352 501 aa19.93■□□□□ 0.78
ERCC1-201ENST00000013807 FGFR2P21802 821 aa19.93■□□□□ 0.78
ERCC1-201ENST00000013807 RFX5P48382 616 aaPredicted RBP19.93■□□□□ 0.78
ERCC1-201ENST00000013807 PRKG1Q13976 671 aa19.93■□□□□ 0.78
ERCC1-201ENST00000013807 RASA3Q14644 834 aa19.93■□□□□ 0.78
ERCC1-201ENST00000013807 CAVIN4Q5BKX8 364 aa19.93■□□□□ 0.78
ERCC1-201ENST00000013807 METTL24Q5JXM2 366 aa19.93■□□□□ 0.78
ERCC1-201ENST00000013807 NBPF12Q5TAG4 269 aaPredicted RBP19.93■□□□□ 0.78
ERCC1-201ENST00000013807 DZIP1LQ8IYY4 767 aaKnown RBP19.93■□□□□ 0.78
ERCC1-201ENST00000013807 ZNF70Q9UC06 446 aaPredicted RBP19.93■□□□□ 0.78
ERCC1-201ENST00000013807 MANSC4A6NHS7 340 aaPredicted RBP19.92■□□□□ 0.78
ERCC1-201ENST00000013807 USP2O75604 605 aaPredicted RBP19.92■□□□□ 0.78
ERCC1-201ENST00000013807 TBC1D8O95759 1140 aa19.92■□□□□ 0.78
ERCC1-201ENST00000013807 RBM5P52756 815 aaKnown RBP eCLIP19.92■□□□□ 0.78
ERCC1-201ENST00000013807 ZNF296Q8WUU4 475 aaPredicted RBP19.92■□□□□ 0.78
ERCC1-201ENST00000013807 TEPSINQ96N21 525 aa19.92■□□□□ 0.78
ERCC1-201ENST00000013807 FBXO3Q9UK99 471 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms