RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Zkscan7E9PVW1 718 aa18.23■□□□□ 0.51
Vcan-201ENSMUST00000109543 Speer4dL7N216 212 aa18.23■□□□□ 0.51
Vcan-201ENSMUST00000109543 Znf692Q3U381 531 aa18.23■□□□□ 0.51
Vcan-201ENSMUST00000109543 Mindy4Q3UQI9 744 aa18.23■□□□□ 0.51
Vcan-201ENSMUST00000109543 Kiaa0753Q6A000 959 aa18.23■□□□□ 0.51
Vcan-201ENSMUST00000109543 Kat6bQ8BRB7 1872 aa18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 Znf326O88291 580 aa18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 LyarQ08288 388 aaKnown RBP18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 Abtb2Q7TQI7 1024 aa18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 Bsdc1Q80Y55 427 aa18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 Rrp9Q91WM3 475 aaKnown RBP18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 Odf2lQ9D478 642 aa18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 Sil1Q9EPK6 465 aa18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 Mmel1Q9JLI3 765 aa18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 Trip6Q9Z1Y4 480 aa18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 Mroh6V9GX81 722 aa18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 Prdm1Q60636 856 aa18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 Ttc27Q8CD92 847 aa18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 CrebrfQ8CDG5 640 aaKnown RBP18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 Pnma3Q8JZW8 466 aa18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 Pcdhb22Q91XZ8 794 aa18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 NgdnQ9DB96 315 aaKnown RBP18.22■□□□□ 0.51
Vcan-201ENSMUST00000109543 Casz1Q9CWL2 1761 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Ccdc112A0AUP1 442 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Cyb5rlB1AS42 316 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Brpf3B2KF05 1204 aaKnown RBP18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Ufl1Q8CCJ3 793 aaKnown RBP18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Mx2Q9WVP9 655 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Mast3Q3U214 1321 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Fer1l6E0CZ42 1862 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Cfap99A0A140LIX9 648 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Bicdl1A0JNT9 577 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Klhl34A2AI76 644 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Lipo1J3QME6 396 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 ErmnQ5EBJ4 281 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Pram1Q6BCL1 675 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Nme8Q715T0 586 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Tpcn2Q8BWC0 731 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Zbtb43Q9DAI4 467 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Mapk8ip1Q9WVI9 707 aa18.21■□□□□ 0.51
Vcan-201ENSMUST00000109543 Wdr19Q3UGF1 1341 aa18.21■□□□□ 0.5
Vcan-201ENSMUST00000109543 Sall1Q9ER74 1322 aa18.21■□□□□ 0.5
Vcan-201ENSMUST00000109543 Cyp3a59D3Z2W7 503 aa18.2■□□□□ 0.5
Vcan-201ENSMUST00000109543 Hvcn1Q3U2S8 269 aa18.2■□□□□ 0.5
Vcan-201ENSMUST00000109543 Washc4Q3UMB9 1173 aa18.2■□□□□ 0.5
Vcan-201ENSMUST00000109543 Gzf1Q4VBD9 706 aa18.2■□□□□ 0.5
Vcan-201ENSMUST00000109543 SdsQ8VBT2 327 aa18.2■□□□□ 0.5
Vcan-201ENSMUST00000109543 IcoslgQ9JHJ8 322 aa18.2■□□□□ 0.5
Vcan-201ENSMUST00000109543 Prr29B1ARI9 187 aa18.19■□□□□ 0.5
Vcan-201ENSMUST00000109543 Tmem109Q3UBX0 243 aa18.19■□□□□ 0.5
Vcan-201ENSMUST00000109543 Tmem143Q8VD26 458 aa18.19■□□□□ 0.5
Vcan-201ENSMUST00000109543 EzrP26040 586 aaKnown RBP18.18■□□□□ 0.5
Vcan-201ENSMUST00000109543 Ccer1Q9CQL2 403 aa18.18■□□□□ 0.5
Vcan-201ENSMUST00000109543 Col4a3bpQ9EQG9 624 aa18.18■□□□□ 0.5
Vcan-201ENSMUST00000109543 Cfap44E9Q5M6 1843 aa18.18■□□□□ 0.5
Vcan-201ENSMUST00000109543 Vps33bP59016 617 aa18.18■□□□□ 0.5
Vcan-201ENSMUST00000109543 Zc3h12cQ5DTV4 884 aa18.18■□□□□ 0.5
Vcan-201ENSMUST00000109543 Atp1a3Q6PIC6 1013 aa18.18■□□□□ 0.5
Vcan-201ENSMUST00000109543 Eaf2Q91ZD6 262 aa18.18■□□□□ 0.5
Vcan-201ENSMUST00000109543 Ttc14Q9CSP9 761 aa18.18■□□□□ 0.5
Vcan-201ENSMUST00000109543 Hmx1O70218 332 aa18.17■□□□□ 0.5
Vcan-201ENSMUST00000109543 Cfap157Q0VFX2 523 aa18.17■□□□□ 0.5
Vcan-201ENSMUST00000109543 Sf3b2Q3UJB0 878 aaKnown RBP18.17■□□□□ 0.5
Vcan-201ENSMUST00000109543 Ces1dQ8VCT4 565 aa18.17■□□□□ 0.5
Vcan-201ENSMUST00000109543 Cdc45Q9Z1X9 566 aa18.17■□□□□ 0.5
Vcan-201ENSMUST00000109543 Cyp26a1O55127 497 aa18.17■□□□□ 0.5
Vcan-201ENSMUST00000109543 Snai1Q02085 264 aa18.17■□□□□ 0.5
Vcan-201ENSMUST00000109543 Fam170aQ66LM6 333 aa18.17■□□□□ 0.5
Vcan-201ENSMUST00000109543 Hook1Q8BIL5 728 aa18.17■□□□□ 0.5
Vcan-201ENSMUST00000109543 SowahdQ8BY98 327 aa18.17■□□□□ 0.5
Vcan-201ENSMUST00000109543 DymQ8CHY3 669 aa18.17■□□□□ 0.5
Vcan-201ENSMUST00000109543 Popdc2Q9ES82 367 aa18.17■□□□□ 0.5
Vcan-201ENSMUST00000109543 Gm20425E9Q035 978 aaKnown RBP18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 Pde6aP27664 859 aa18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 SrprbP47758 269 aa18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 Znf496Q5SXI5 585 aa18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 Ggt6Q6PDE7 497 aa18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 Ube3cQ80U95 1083 aa18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 Gpatch3Q8BIY1 525 aa18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 Slc39a11Q8BWY7 342 aa18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 Lama4P97927 1816 aa18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 Metap2O08663 478 aaKnown RBP18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 Tom1O88746 492 aa18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 GabrdP22933 449 aa18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 NapbP28663 298 aa18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 Pcdhb15Q91Y04 786 aa18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 Krt84Q99M73 603 aa18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 Snw1Q9CSN1 536 aaKnown RBP18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 FliiQ9JJ28 1271 aa18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 Clic4Q9QYB1 253 aa18.16■□□□□ 0.5
Vcan-201ENSMUST00000109543 Med23Q80YQ2 1367 aa18.15■□□□□ 0.5
Vcan-201ENSMUST00000109543 1700029H14RikE9PY36 240 aa18.15■□□□□ 0.5
Vcan-201ENSMUST00000109543 Me1P06801 572 aa18.15■□□□□ 0.5
Vcan-201ENSMUST00000109543 Cep63Q3UPP8 700 aa18.15■□□□□ 0.5
Vcan-201ENSMUST00000109543 Eno4Q8C042 619 aa18.15■□□□□ 0.5
Vcan-201ENSMUST00000109543 Osbpl5Q9ER64 874 aa18.15■□□□□ 0.5
Vcan-201ENSMUST00000109543 Aox4Q3TYQ9 1336 aa18.15■□□□□ 0.5
Vcan-201ENSMUST00000109543 Krt24A1L317 512 aa18.15■□□□□ 0.5
Vcan-201ENSMUST00000109543 Casp12O08736 419 aa18.15■□□□□ 0.5
Vcan-201ENSMUST00000109543 CrcpO35427 148 aa18.15■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 61.6 ms