RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Noc4lQ8BHY2 516 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Larp6Q8BN59 492 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 ApobrQ8VBT6 942 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Lrrc17Q9CXD9 443 aa10.67□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Bcl9Q9D219 1425 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Gm10563F6WIE4 79 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Stt3aP46978 705 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 CastP51125 788 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Atp8a1P70704 1164 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Scnn1aQ61180 699 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 TpppQ7TQD2 218 aaKnown RBP10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Plekha6Q7TQG1 1173 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Phf8Q80TJ7 1023 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Tor4aQ8BH02 426 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Yipf4Q8C407 246 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Ccdc73Q8CDM4 1066 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Fam133bQ9CVI2 245 aaKnown RBP10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Ccdc91Q9D8L5 442 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 RictorQ6QI06 1708 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Ssh2Q5SW75 1423 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Prdm2A2A7B5 1709 aaKnown RBP10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Plch2A2AP18 1501 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Dip2aQ8BWT5 1523 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Slc4a5E9Q3M5 1116 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Cd19P25918 547 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Axdnd1Q3UZ57 424 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 C2cd5Q7TPS5 1016 aaKnown RBP10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Arpc5lQ9D898 153 aa10.66□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Elp1Q7TT37 1333 aaKnown RBP10.65□□□□□ -0.7
Upf3b-201ENSMUST00000076265 CltaO08585 235 aa10.65□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Gse1Q3U3C9 1213 aa10.65□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Prkg2Q61410 762 aa10.65□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Ptk7Q8BKG3 1062 aa10.65□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Tmem266Q8BZB3 538 aa10.65□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Pcdhb17Q91VD8 799 aa10.65□□□□□ -0.7
Upf3b-201ENSMUST00000076265 DroshaQ5HZJ0 1373 aaKnown RBP10.65□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Abca17E9PX95 1733 aa10.65□□□□□ -0.7
Upf3b-201ENSMUST00000076265 Med14A2ABV5 1459 aaKnown RBP10.65□□□□□ -0.71
Upf3b-201ENSMUST00000076265 SlmapQ3URD3 845 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Zbtb7bQ64321 544 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Trim17Q7TPM3 477 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Galnt17Q7TT15 598 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Aldh1b1Q9CZS1 519 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Amotl1Q9D4H4 968 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 IcmtQ9EQK7 283 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Rasgrp2Q9QUG9 608 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Erbb4Q61527 1308 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Capn2O08529 700 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Pla2g4eQ50L42 875 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 PodnQ7TQ62 611 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Mtmr12Q80TA6 747 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Lrrc27Q80YS5 523 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Tmem98Q91X86 226 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Dlc1Q9R0Z9 1092 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Arhgap23Q69ZH9 1483 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Kdm3bQ6ZPY7 1562 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Topaz1E5FYH1 1653 aa10.64□□□□□ -0.71
Upf3b-201ENSMUST00000076265 CstaP56567 97 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Rnpc3Q3UZ01 514 aaKnown RBP10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Taf3Q5HZG4 932 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Ccdc93Q7TQK5 629 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Nacc1Q7TSZ8 514 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Catsper4Q8BVN3 442 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Ctnnbl1Q9CWL8 563 aaKnown RBP10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Cyp11a1Q9QZ82 526 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Vps8Q0P5W1 1427 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Gm5861F6VCN9 180 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 FxnO35943 207 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Ttf1Q62187 859 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Brsk2Q69Z98 735 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Usp54Q8BL06 1588 aaKnown RBP10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Ubr7Q8BU04 425 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Ephb1Q8CBF3 984 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Mtfr2Q8VED8 361 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Anapc4Q91W96 807 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Ccdc43Q9CR29 222 aaKnown RBP10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Ak2Q9WTP6 239 aa10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Mrvi1Q9WUX5 899 aaKnown RBP10.63□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Gm21969J3QJZ1 289 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 PtpraP18052 829 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Abcd1P48410 736 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Masp1P98064 704 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Gm29609Q3UU56 907 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Ccdc155Q80VJ8 648 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Sun2Q8BJS4 731 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Gtf3c2Q8BL74 907 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Iffo2Q8R2V2 512 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Ptcd2Q8R3K3 381 aaKnown RBP10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Irak4Q8R4K2 459 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Ddx41Q91VN6 622 aaKnown RBP10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 FanclQ9CR14 375 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Phkg2Q9DB30 406 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Cnbd1B1AWM0 430 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 SarsP26638 512 aaKnown RBP10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Fdx1P46656 188 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Elf1Q60775 612 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Ecm1Q61508 559 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 PoliQ6R3M4 717 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 SgtaQ8BJU0 315 aa10.62□□□□□ -0.71
Upf3b-201ENSMUST00000076265 Tor1bQ9ER41 336 aa10.62□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 43.7 ms