RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 Trim25Q61510 634 aaKnown RBP17.37■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Ankrd13dQ6PD24 605 aa17.37■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Lrrc2Q8VDB8 371 aa17.37■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Snw1Q9CSN1 536 aaKnown RBP17.37■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Zscan22Q8BGS5 496 aa17.37■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Mast3Q3U214 1321 aa17.37■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Bsdc1Q80Y55 427 aa17.37■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Pnma3Q8JZW8 466 aa17.37■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Kif13aQ9EQW7 1749 aa17.37■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Stx1aO35526 288 aa17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Acnat2Q8BGG9 420 aa17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Dhx8A2A4P0 1244 aaKnown RBP17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 CltaO08585 235 aa17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Cep120Q7TSG1 988 aa17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Lrrc59Q922Q8 307 aaKnown RBP17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 NktrP30415 1453 aa17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Gpr182P43142 395 aa17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Bag1Q60739 355 aa17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Ccdc150Q8CDI7 1110 aa17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Sde2Q8K1J5 448 aaKnown RBP17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Foxo3Q9WVH4 672 aa17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Elmsan1E9Q2I4 1089 aaKnown RBP17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Myl3P09542 204 aa17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 NpeppsQ11011 920 aa17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Ccdc7Q9D541 371 aa17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Zkscan5Q9Z1D8 819 aa17.36■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Ncaph2Q8BSP2 607 aa17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 9230110C19RikQ8CC70 267 aa17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Mrpl50Q8VDT9 159 aaKnown RBP17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Cep89Q9CZX2 791 aa17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Lmbr1Q9JIT0 490 aa17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Cps1Q8C196 1500 aa17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Aox1O54754 1333 aa17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Vps16Q920Q4 839 aa17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Ttc14Q9CSP9 761 aa17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Fam84aQ9D650 292 aa17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Atp8b3Q6UQ17 1335 aa17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Stox1B2RQL2 990 aa17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Kif2aP28740 705 aa17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Frat1P70339 274 aa17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Cnnm2Q3TWN3 875 aa17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Dbndd1Q9CZ00 160 aa17.35■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Prr29B1ARI9 187 aa17.34■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Sptlc2P97363 560 aaKnown RBP17.34■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Spg7Q3ULF4 781 aa17.34■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Lrrc43Q3V0L5 667 aa17.34■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Brinp3Q499E0 766 aa17.34■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Asap2Q7SIG6 958 aa17.34■□□□□ 0.37
Scaf4-201ENSMUST00000039280 SdsQ8VBT2 327 aa17.34■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Mx2Q9WVP9 655 aa17.34■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Flt4P35917 1363 aa17.34■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Ano10Q8BH79 659 aa17.34■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Vps18Q8R307 973 aa17.34■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Plcd1Q8R3B1 756 aa17.34■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Ipo7Q9EPL8 1038 aaKnown RBP17.34■□□□□ 0.37
Scaf4-201ENSMUST00000039280 StrbpQ91WM1 672 aaKnown RBP17.34■□□□□ 0.37
Scaf4-201ENSMUST00000039280 4930548H24RikQ9D496 437 aa17.34■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Ccdc129Q14B48 1034 aa17.33■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Map9Q3TRR0 646 aa17.33■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Zc3h13E9Q784 1729 aaKnown RBP17.33■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Slit3Q9WVB4 1523 aa17.33■□□□□ 0.37
Scaf4-201ENSMUST00000039280 Olfm5Q8BU90 496 aa17.33■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Triml1Q8BVP1 470 aa17.33■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Gnl2Q99LH1 728 aaKnown RBP17.33■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Galntl5Q9D4M9 431 aa17.33■□□□□ 0.36
Scaf4-201ENSMUST00000039280 TrdnE9Q9K5 693 aa17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Traf3ip1Q149C2 625 aa17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Cdca8Q8BHX3 289 aa17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 RtcbQ99LF4 505 aaKnown RBP17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Naa16Q9DBB4 864 aa17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 IncenpQ9WU62 880 aa17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Pde3aQ9Z0X4 1141 aa17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Atp1a3Q6PIC6 1013 aa17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 March6Q6ZQ89 909 aa17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Card6E9PWH2 1175 aa17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Slc1a4O35874 532 aa17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Dapk3O54784 448 aa17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Ms4a2P20490 235 aa17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Ankrd23Q812A3 306 aa17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Emilin2Q8K482 1074 aa17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Pcdhb22Q91XZ8 794 aa17.32■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Tbc1d8bA3KGB4 1114 aa17.31■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Prl3d1P18121 224 aa17.31■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Kmt5bQ3U8K7 883 aa17.31■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Trim56Q80VI1 734 aaKnown RBP17.31■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Ercc6lQ8BHK9 1240 aa17.31■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Maats1Q8BRC6 783 aa17.31■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Ppm1mQ8BU27 406 aa17.31■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Ampd3O08739 766 aa17.31■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Mapkapk5O54992 473 aa17.31■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Wdr24Q8CFJ9 790 aa17.31■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Mcm6P97311 821 aa17.31■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Plbd2Q3TCN2 594 aa17.31■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Zkscan4Q5SZT6 480 aa17.31■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Tpcn2Q8BWC0 731 aa17.31■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Pik3c2bE9QAN8 1632 aa17.3■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Mtx1P47802 317 aa17.3■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Mylk2Q8VCR8 613 aa17.3■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Prr5lA2AVJ5 370 aa17.3■□□□□ 0.36
Scaf4-201ENSMUST00000039280 Gcom1E9PZ54 550 aa17.3■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms