RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Plekhg2Q6KAU7 1340 aa18.77■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Tubb4bP68372 445 aaKnown RBP18.77■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Neurog2P70447 263 aa18.77■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Wdr93Q402B2 695 aa18.77■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Cd274Q9EP73 290 aa18.77■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Foxo3Q9WVH4 672 aa18.77■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 PzpQ61838 1495 aa18.77■□□□□ 0.6
Ubfd1-201ENSMUST00000033158 Gm28047Q3US59 414 aa18.77■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Tmx4Q8C0L0 335 aa18.77■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Plcd1Q8R3B1 756 aa18.77■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Gm16486A0A1D5RMD1 1434 aa18.77■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Prr16A3KMN5 304 aa18.76■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Clec11aO88200 328 aa18.76■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Dact3Q0PHV7 610 aa18.76■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Kdm1aQ6ZQ88 853 aa18.76■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Hook2Q7TMK6 716 aa18.76■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Prdm1Q60636 856 aa18.76■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Uba5Q8VE47 403 aa18.76■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Txnrd1Q9JMH6 613 aa18.76■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Gm45140A0A0N4SUM8 220 aa18.76■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Gm12185Q5NCB2 835 aa18.76■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 SdsQ8VBT2 327 aa18.76■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Pcdhb5Q91XZ5 792 aa18.76■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Clul1Q3ZRW6 464 aa18.75■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Capza3P70190 299 aa18.75■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Idi1P58044 227 aa18.75■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Tpcn2Q8BWC0 731 aa18.75■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Nup160Q9Z0W3 1402 aaKnown RBP18.75■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Morc2aQ69ZX6 1030 aa18.75■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Zswim4Q8C7B8 1101 aa18.75■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Slain2Q8CI08 581 aa18.75■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 StambpQ9CQ26 424 aa18.75■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Scaf1Q5U4C3 1256 aaKnown RBP18.74■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Miga2Q8BK03 593 aa18.74■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Gramd4Q8CB44 633 aa18.74■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Pdcd6ipQ9WU78 869 aaKnown RBP18.74■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Aox1O54754 1333 aa18.74■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Tcerg1lQ3B807 590 aa18.74■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Tmco5aQ9D9D5 303 aa18.74■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Plagl1Q9JLQ4 704 aa18.74■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Palm3A2TJV2 734 aa18.74■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Chmp6P0C0A3 200 aa18.74■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Arhgef6Q8K4I3 771 aa18.74■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 CpvlQ9D3S9 478 aa18.74■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Kif5bQ61768 963 aa18.74■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Nlrp9aQ66X03 949 aa18.74■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Kcnh3Q9WVJ0 1095 aa18.74■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Hfm1D3Z4R1 1434 aa18.73■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 FanccP50652 591 aa18.73■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Lrsam1Q80ZI6 727 aa18.73■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Shtn1Q8K2Q9 631 aa18.73■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Kif17Q99PW8 1038 aa18.73■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Efhd1Q9D4J1 240 aa18.73■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 NpatQ8BMA5 1420 aa18.73■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Il4rP16382 810 aa18.73■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Edc3Q8K2D3 508 aaKnown RBP18.73■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Efcab6Q6P1E8 1516 aa18.73■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Epb41l2O70318 988 aaKnown RBP18.73■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Vps37cQ8R105 352 aa18.73■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Hexim1Q8R409 356 aaKnown RBP18.73■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Hs6st3Q9QYK4 470 aa18.73■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Zfp213E9QAW0 468 aa18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Mx1P09922 631 aa18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Specc1Q5SXY1 1067 aa18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Erich3F6QRE9 1637 aa18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Nsrp1Q5NCR9 542 aa18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Asic3Q6X1Y6 530 aa18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 ClasrpQ8CFC7 668 aa18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Slc4a8Q8JZR6 1089 aa18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Ppp1r3fQ9JIG4 799 aa18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Tex14Q7M6U3 1450 aa18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Bin2D3Z6Q9 489 aa18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Rasal2E9PW37 1286 aa18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Tubb5P99024 444 aaKnown RBP18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Eif4a1P60843 406 aaKnown RBP18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Pdzd9Q9D9M4 266 aa18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Cnpy2Q9QXT0 182 aa18.72■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 1700006A11RikB9EHI3 544 aa18.71■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 4921504E06RikQ8CET2 560 aa18.71■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Mast1Q9R1L5 1570 aa18.71■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 MthfslL7N466 203 aa18.71■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Nfil3O08750 462 aa18.71■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Slc27a3O88561 667 aa18.71■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Fermt1P59113 677 aa18.71■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Myl10Q62082 202 aa18.71■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Exoc3Q6KAR6 755 aa18.71■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Fchsd1Q6PFY1 688 aa18.71■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Mybl2P48972 704 aa18.71■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Snx25Q3ZT31 840 aa18.71■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Mcm7Q61881 719 aaKnown RBP18.71■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Ubxn1Q922Y1 297 aa18.71■□□□□ 0.59
Ubfd1-201ENSMUST00000033158 Atp8a2P98200 1148 aa18.7■□□□□ 0.58
Ubfd1-201ENSMUST00000033158 DonsonQ9QXP4 560 aa18.7■□□□□ 0.58
Ubfd1-201ENSMUST00000033158 Ccdc113Q8C5T8 377 aa18.7■□□□□ 0.58
Ubfd1-201ENSMUST00000033158 Col4a3bpQ9EQG9 624 aa18.7■□□□□ 0.58
Ubfd1-201ENSMUST00000033158 Ccdc170D3YXL0 722 aa18.7■□□□□ 0.58
Ubfd1-201ENSMUST00000033158 Nop2Q922K7 793 aaKnown RBP18.7■□□□□ 0.58
Ubfd1-201ENSMUST00000033158 Tab2Q99K90 693 aa18.7■□□□□ 0.58
Ubfd1-201ENSMUST00000033158 Ppp1r9aH3BJD6 1292 aa18.7■□□□□ 0.58
Ubfd1-201ENSMUST00000033158 Prl7a2O54831 253 aa18.7■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 54 ms