RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Gpatch3Q8BIY1 525 aa19.56■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Zfp202Q8C879 641 aa19.56■□□□□ 0.72
Ctcf-201ENSMUST00000005841 MbipQ99LQ1 341 aa19.56■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Smc1aQ9CU62 1233 aaKnown RBP19.56■□□□□ 0.72
Ctcf-201ENSMUST00000005841 PhaxQ9JJT9 385 aaKnown RBP19.56■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Mrc1Q61830 1456 aa19.55■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Gm21985Q6P6P5 1106 aa19.55■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Ripor2Q80U16 1078 aa19.55■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Fam102bQ8BQS4 339 aa19.55■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Pus3Q9JI38 481 aa19.55■□□□□ 0.72
Ctcf-201ENSMUST00000005841 MecomP14404 1042 aa19.55■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Ncaph2Q8BSP2 607 aa19.55■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Slc35g1Q8BY79 368 aa19.55■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Cabp4Q8VHC5 271 aa19.55■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Sos2Q02384 1333 aa19.55■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Cdc27A2A6Q5 825 aa19.55■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Ppp2r2cQ8BG02 447 aa19.55■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Amotl2Q8K371 772 aa19.55■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Lmbr1lQ9D1E5 489 aa19.55■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Rimbp3Q3V0F0 1606 aa19.54■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Myo1bP46735 1107 aa19.54■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Mcm6P97311 821 aa19.54■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Anp32eP97822 260 aaKnown RBP19.54■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Ccdc129Q14B48 1034 aa19.54■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Btbd11Q6GQW0 1109 aa19.54■□□□□ 0.72
Ctcf-201ENSMUST00000005841 NenfQ9CQ45 171 aa19.54■□□□□ 0.72
Ctcf-201ENSMUST00000005841 GmnnO88513 206 aa19.54■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Adcy2Q80TL1 1090 aa19.54■□□□□ 0.72
Ctcf-201ENSMUST00000005841 MypnQ5DTJ9 1315 aa19.54■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Adora1Q60612 326 aa19.54■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Q8C1R3 189 aa19.54■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Vps18Q8R307 973 aa19.53■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Vmn2r23E9PXI5 849 aa19.53■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Fkbp4P30416 458 aa19.53■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Pfkfb1P70266 471 aa19.53■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Uri1Q3TLD5 531 aa19.53■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Ccdc102aQ3TMW1 549 aa19.53■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Dis3l2Q8CI75 870 aaKnown RBP19.53■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Cd209bQ8CJ91 325 aa19.53■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Nek9Q8K1R7 984 aa19.53■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Abca15E9PWH4 1668 aa19.53■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Pald1P70261 859 aa19.53■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Mns1Q61884 491 aa19.53■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Mdh1P14152 334 aa19.52■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Tdo2P48776 406 aa19.52■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Epha2Q03145 977 aa19.52■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Txndc2Q6P902 515 aa19.52■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Ppp1r18Q8BQ30 594 aa19.52■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Sh2b1Q91ZM2 756 aa19.52■□□□□ 0.72
Ctcf-201ENSMUST00000005841 PsapQ61207 557 aaKnown RBP19.52■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Terf2ipQ91VL8 393 aa19.52■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Taf7Q9R1C0 341 aa19.52■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Col14a1Q80X19 1797 aa19.52■□□□□ 0.72
Ctcf-201ENSMUST00000005841 Gm21190A0A0G2JGJ6 266 aa19.52■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Pde4bB1AWC9 736 aa19.52■□□□□ 0.71
Ctcf-201ENSMUST00000005841 HrQ61645 1182 aa19.52■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Myo1cQ9WTI7 1063 aa19.52■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Unc13bQ9Z1N9 1602 aa19.51■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Hspd1P63038 573 aaKnown RBP19.51■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Ncoa4Q5U4H9 625 aa19.51■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Pcdhb14Q6PB90 796 aa19.51■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Tc2nQ91XT6 489 aa19.51■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Fut8Q9WTS2 575 aa19.51■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Specc1lQ2KN98 1118 aaKnown RBP19.51■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Iqsec3Q3TES0 1195 aa19.51■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Arhgef16Q3U5C8 713 aa19.51■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Gm28047Q3US59 414 aa19.51■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Vps54Q5SPW0 977 aa19.51■□□□□ 0.71
Ctcf-201ENSMUST00000005841 CpdO89001 1377 aa19.5■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Atg9aQ68FE2 551 aa19.5■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Nlrp1aQ2LKU9 1182 aa19.5■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Nek5Q7TSC3 627 aa19.5■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Tnrc6cQ3UHC0 1690 aaKnown RBP19.5■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Pbx1P41778 430 aa19.49■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Map9Q3TRR0 646 aa19.49■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Rufy2Q8R4C2 606 aa19.49■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Sptlc2P97363 560 aaKnown RBP19.49■□□□□ 0.71
Ctcf-201ENSMUST00000005841 LyarQ08288 388 aaKnown RBP19.49■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Prl2c1Q5SVL9 228 aa19.49■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Tmx1Q8VBT0 278 aa19.49■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Cct2P80314 535 aaKnown RBP19.49■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Tomm22Q9CPQ3 142 aa19.49■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Atp1a4Q9WV27 1032 aa19.49■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Slc7a1Q09143 622 aa19.48■□□□□ 0.71
Ctcf-201ENSMUST00000005841 TxlnaQ6PAM1 554 aaKnown RBP19.48■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Bicdl2Q8CHW5 507 aa19.48■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Lonp2Q9DBN5 852 aa19.48■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Tiam2Q6ZPF3 1715 aa19.48■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Brd3Q8K2F0 726 aaKnown RBP19.48■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Greb1lB9EJV3 1913 aa19.48■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Myh6Q02566 1938 aaKnown RBP19.48■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Maats1Q8BRC6 783 aa19.47■□□□□ 0.71
Ctcf-201ENSMUST00000005841 SdsQ8VBT2 327 aa19.47■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Iqca1Q9CUL5 857 aa19.47■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Tmem87bQ8BKU8 555 aa19.47■□□□□ 0.71
Ctcf-201ENSMUST00000005841 LarsQ8BMJ2 1178 aa19.47■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Atp8b1Q148W0 1251 aa19.47■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Sec62Q8BU14 398 aaKnown RBP19.47■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Simc1E9Q6E9 1354 aa19.46■□□□□ 0.71
Ctcf-201ENSMUST00000005841 Npc1l1Q6T3U4 1333 aa19.46■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms