RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 ZNF665Q9H7R5 613 aa13.81□□□□□ -0.2
CCNA1-203ENST00000625767 EXTL2Q9UBQ6 330 aa13.81□□□□□ -0.2
CCNA1-203ENST00000625767 A3GALT2U3KPV4 340 aa13.81□□□□□ -0.2
CCNA1-203ENST00000625767 A0A096LNT2 108 aa13.8□□□□□ -0.2
CCNA1-203ENST00000625767 METTL21EPA6NDL7 271 aa13.8□□□□□ -0.2
CCNA1-203ENST00000625767 NDUFS8O00217 210 aa13.8□□□□□ -0.2
CCNA1-203ENST00000625767 SIGLEC5O15389 551 aa13.8□□□□□ -0.2
CCNA1-203ENST00000625767 PDCD6O75340 191 aa13.8□□□□□ -0.2
CCNA1-203ENST00000625767 CHRM2P08172 466 aa13.8□□□□□ -0.2
CCNA1-203ENST00000625767 CSF3P09919 207 aa13.8□□□□□ -0.2
CCNA1-203ENST00000625767 RPS2P15880 293 aaKnown RBP13.8□□□□□ -0.2
CCNA1-203ENST00000625767 LMO1P25800 156 aa13.8□□□□□ -0.2
CCNA1-203ENST00000625767 TMEM155Q4W5P6 130 aa13.8□□□□□ -0.2
CCNA1-203ENST00000625767 PAN3Q58A45 887 aaKnown RBP13.8□□□□□ -0.2
CCNA1-203ENST00000625767 ZNF841Q6ZN19 808 aa13.8□□□□□ -0.2
CCNA1-203ENST00000625767 TMEM185AQ8NFB2 350 aa13.8□□□□□ -0.2
CCNA1-203ENST00000625767 PLPPR1Q8TBJ4 325 aa13.8□□□□□ -0.2
CCNA1-203ENST00000625767 HDHD3Q9BSH5 251 aaPredicted RBP13.8□□□□□ -0.2
CCNA1-203ENST00000625767 DPCDQ9BVM2 203 aaPredicted RBP13.8□□□□□ -0.2
CCNA1-203ENST00000625767 PECRQ9BY49 303 aa13.8□□□□□ -0.2
CCNA1-203ENST00000625767 ITGB1BP2Q9UKP3 347 aa13.8□□□□□ -0.2
CCNA1-203ENST00000625767 TRAV18A0A075B6X5 111 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 DVL1O14640 695 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FSTL3O95633 263 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 WNT2P09544 360 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 LMO4P61968 165 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 IL13RA1P78552 427 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 Q6ZTK2 550 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 LINC00596Q86U02 117 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 MUC20Q8N307 709 aaPredicted RBP13.79□□□□□ -0.2
CCNA1-203ENST00000625767 RAB40AQ8WXH6 277 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 RAB3CQ96E17 227 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 S100A16Q96FQ6 103 aaKnown RBP13.79□□□□□ -0.2
CCNA1-203ENST00000625767 DIRAS2Q96HU8 199 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 IFT22Q9H7X7 185 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 PATZ1Q9HBE1 687 aaKnown RBP13.79□□□□□ -0.2
CCNA1-203ENST00000625767 GLS2Q9UI32 602 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 MRPS7Q9Y2R9 242 aaKnown RBP13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FAM90A10PA6NDY2 464 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FAM90A18PA6NE21 464 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FAM90A16PA6NEW6 464 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 TMEM235A6NFC5 223 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FAM90A20PA6NIJ5 464 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 NKX6-3A6NJ46 265 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FAM90A8PA6NJQ4 464 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FAM90A7PA6NKC0 464 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FAM90A22PA8MWA6 464 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FAM90A12PA8MX19 464 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FAM90A5PA8MXJ8 464 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FAM90A23PA8MXZ1 464 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 K7N7A8 449 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 MFNGO00587 321 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 PHF1O43189 567 aaPredicted RBP13.79□□□□□ -0.2
CCNA1-203ENST00000625767 IGHV2-5P01817 119 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 TK1P04183 234 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FAM90A15PP0C7V4 464 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FAM90A13PP0C7W8 464 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FAM90A14PP0C7W9 464 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FAM90A24PP0C7X0 464 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 HIST1H1DP16402 221 aaKnown RBP13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FUT3P21217 361 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 RANBP1P43487 201 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 TAS2R20P59543 309 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 AESQ08117 197 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 ZNF561Q8N587 486 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 NEDD4LQ96PU5 975 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 FOXC2Q99958 501 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 PLEKHJ1Q9NW61 149 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 KAAG1Q9UBP8 84 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 PCDHB10Q9UN67 800 aa13.79□□□□□ -0.2
CCNA1-203ENST00000625767 CREBBPQ92793 2442 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 WNK2Q9Y3S1 2297 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 RNF223E7ERA6 249 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 F5H0A9 414 aaPredicted RBP13.78□□□□□ -0.2
CCNA1-203ENST00000625767 XRCC3O43542 346 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 HLA-DQB1P01920 261 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 DSCR9P59020 149 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 EDDM3AQ14507 147 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 GRK1Q15835 563 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 KCNJ8Q15842 424 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 ZNF260Q3ZCT1 412 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 CDNFQ49AH0 187 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 TMEM69Q5SWH9 247 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 Q6ZPA2 131 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 SLC36A1Q7Z2H8 476 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 SPICQ8N5J4 248 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 NEK7Q8TDX7 302 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 COQ2Q96H96 371 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 CMTM3Q96MX0 182 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 WDFY2Q96P53 400 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 DNTTIP1Q9H147 329 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 AK3Q9UIJ7 227 aa13.78□□□□□ -0.2
CCNA1-203ENST00000625767 ZFHX3Q15911 3703 aa13.77□□□□□ -0.2
CCNA1-203ENST00000625767 TRAV39A0A0B4J263 110 aa13.77□□□□□ -0.21
CCNA1-203ENST00000625767 A0A0G2JMP0 313 aa13.77□□□□□ -0.21
CCNA1-203ENST00000625767 A0A0X1KG70 313 aa13.77□□□□□ -0.21
CCNA1-203ENST00000625767 S100A5P33763 92 aa13.77□□□□□ -0.21
CCNA1-203ENST00000625767 GUCA2AQ02747 115 aa13.77□□□□□ -0.21
CCNA1-203ENST00000625767 C5orf24Q7Z6I8 188 aa13.77□□□□□ -0.21
CCNA1-203ENST00000625767 CCDC190Q86UF4 302 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms