RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 H3BSH0 61 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 J3QLI3 93 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 MLNRO43193 412 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 AKR7A2O43488 359 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 LMX1BO60663 402 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 CRLF1O75462 422 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 RPP14O95059 124 aaKnown RBP4.43□□□□□ -1.7
SHMT1-211ENST00000618902 LY6G6DO95868 133 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 IGHV1-46P01743 117 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 TTRP02766 147 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 MT-ND4P03905 459 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 CD74P04233 296 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 ALDOBP05062 364 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 UBBP0CG47 229 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 SLC25A4P12235 298 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 MGMTP16455 207 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF16P17020 682 aaPredicted RBP4.43□□□□□ -1.7
SHMT1-211ENST00000618902 CXCL3P19876 107 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 CDK2P24941 298 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 COL8A2P25067 703 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 HTR2CP28335 458 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 HSD11B1P28845 292 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 PMELP40967 661 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 ECI1P42126 302 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 CBX5P45973 191 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 MMP16P51512 607 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 CCR6P51684 374 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 TAS2R31P59538 309 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 FAM3AP98173 230 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 HOXA4Q00056 320 aaPredicted RBP4.43□□□□□ -1.7
SHMT1-211ENST00000618902 EXOSC2Q13868 293 aaKnown RBP4.43□□□□□ -1.7
SHMT1-211ENST00000618902 HFEQ30201 348 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 C2orf76Q3KRA6 126 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 CHRFAM7AQ494W8 412 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 ACTBL2Q562R1 376 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 C1orf100Q5SVJ3 147 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 FAM27D1Q5T7N8 215 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 SFRP4Q6FHJ7 346 aaPredicted RBP4.43□□□□□ -1.7
SHMT1-211ENST00000618902 FAM166AQ6J272 317 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 STEAP1BQ6NZ63 245 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 C11orf88Q6PI97 169 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 UQCC3Q6UW78 93 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 PGAP1Q75T13 922 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 SLC36A1Q7Z2H8 476 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 CATSPERDQ86XM0 798 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.43□□□□□ -1.7
SHMT1-211ENST00000618902 SERPINA12Q8IW75 414 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 PDZD9Q8IXQ8 264 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 C1orf87Q8N0U7 546 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 CIARTQ8N365 385 aaPredicted RBP4.43□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF525Q8N782 197 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 ZDHHC22Q8N966 263 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 LINC01356Q8N9X3 169 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 BHLHE23Q8NDY6 225 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 OR5T2Q8NGG2 359 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 OR56B2PQ8NGI1 322 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 OR52H1Q8NGJ2 320 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 OR5D14Q8NGL3 314 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 OR13G1Q8NGZ3 307 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 OR10AC1Q8NH08 325 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 DVL3Q92997 716 aaPredicted RBP4.43□□□□□ -1.7
SHMT1-211ENST00000618902 RBPMSQ93062 196 aaKnown RBP4.43□□□□□ -1.7
SHMT1-211ENST00000618902 FAM3DQ96BQ1 224 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 C10orf35Q96D05 121 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 SLC25A38Q96DW6 304 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 REEP6Q96HR9 211 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 DPCDQ9BVM2 203 aaPredicted RBP4.43□□□□□ -1.7
SHMT1-211ENST00000618902 PBOV1Q9GZY1 135 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 RGCCQ9H4X1 137 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 MOB1AQ9H8S9 216 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 SAP30LQ9HAJ7 183 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 RDH8Q9NYR8 311 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 KLK11Q9UBX7 282 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 OPN4Q9UHM6 478 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 IKZF2Q9UKS7 526 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 KCNS2Q9ULS6 477 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 R4GMQ9 66 aa4.43□□□□□ -1.7
SHMT1-211ENST00000618902 TRAV20A0A0B4J274 112 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 A0A0B4J2A0 478 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 PIGBOS1A0A0B4J2F0 54 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 IGHV1-69-2A0A0G2JMI3 117 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 IGHV3-64DA0A0J9YX35 117 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 TMEM269A0A1B0GVZ9 245 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 LRRC30A6NM36 301 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 P2RY10O00398 339 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 WNT9BO14905 357 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 ARPC1BO15143 372 aaKnown RBP4.42□□□□□ -1.7
SHMT1-211ENST00000618902 SPRY3O43610 288 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 NDUFA2O43678 99 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 TIMM8AO60220 97 aaPredicted RBP4.42□□□□□ -1.7
SHMT1-211ENST00000618902 GMDSO60547 372 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 TSC22D2O75157 780 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 CA11O75493 328 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 RAB3DO95716 219 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 CYB5AP00167 134 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 FAM157CP0CG43 387 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 PPIAL4GP0DN37 164 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 IGFBP3P17936 291 aaPredicted RBP4.42□□□□□ -1.7
SHMT1-211ENST00000618902 ZP3P21754 424 aa4.42□□□□□ -1.7
SHMT1-211ENST00000618902 GATA4P43694 442 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms