RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 SLC25A26Q70HW3 274 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 SATL1Q86VE3 508 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 TPRA1Q86W33 373 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 NKAIN3Q8N8D7 197 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 POC1AQ8NBT0 407 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 Q8NFD4 153 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 PXT1Q8NFP0 134 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 RFT1Q96AA3 541 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 CPNE2Q96FN4 548 aaPredicted RBP10.93□□□□□ -0.66
CTSA-213ENST00000606782 SDSLQ96GA7 329 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 KCTD7Q96MP8 289 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 CITED1Q99966 193 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 NRIP2Q9BQI9 281 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 UQCC2Q9BRT2 126 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 DPAGT1Q9H3H5 408 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 RNF167Q9H6Y7 350 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 RHOFQ9HBH0 211 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 ONECUT1Q9UBC0 465 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 POLDIP2Q9Y2S7 368 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 AK6Q9Y3D8 172 aaKnown RBP10.93□□□□□ -0.66
CTSA-213ENST00000606782 MAB21L2Q9Y586 359 aa10.93□□□□□ -0.66
CTSA-213ENST00000606782 IGKV1-12A0A0C4DH73 117 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 LOC100506127A0A0U1RQW1 187 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 PDCD5O14737 125 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 GPR137BO60478 399 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 IGKV1D-12P01611 117 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 IGHV4-59P01825 116 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 FBP1P09467 338 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 TMEM225BP0DP42 221 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 MTNR1BP49286 362 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 UBE2E1P51965 193 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 GPR107Q5VW38 600 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 SLC16A12Q6ZSM3 486 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 GPER1Q99527 375 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 METTL8Q9H825 291 aaKnown RBP10.92□□□□□ -0.66
CTSA-213ENST00000606782 HES4Q9HCC6 221 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 SIRT7Q9NRC8 400 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 TNFRSF19Q9NS68 423 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 ZNRD1Q9P1U0 126 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 FAM96BQ9Y3D0 163 aa10.92□□□□□ -0.66
CTSA-213ENST00000606782 VWFP04275 2813 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 TRBV23-1A0A0A0MS06 115 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 F8VVB4 439 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 F8VWA3 439 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 NPFFO15130 113 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 ANGPTL7O43827 346 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 CLPXO76031 633 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 KDM4BO94953 1096 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 TFF1P04155 84 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 MYL9P24844 172 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 SDC2P34741 201 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 NPBWR2P48146 333 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 POU3F4P49335 361 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 GMFBP60983 142 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 TAF9Q16594 264 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 CTF1Q16619 201 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 NCR3LG1Q68D85 454 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 PDZD9Q8IXQ8 264 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 JAGN1Q8N5M9 183 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 LINC01006Q8NI28 216 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 H1FXQ92522 213 aaKnown RBP10.91□□□□□ -0.66
CTSA-213ENST00000606782 SLAMF9Q96A28 289 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 CEP19Q96LK0 163 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 ZNF488Q96MN9 340 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 NAA50Q9GZZ1 169 aaKnown RBP10.91□□□□□ -0.66
CTSA-213ENST00000606782 V9GY05 133 aa10.91□□□□□ -0.66
CTSA-213ENST00000606782 SLC22A1O15245 554 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 TSPAN9O75954 239 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 GABARAPO95166 117 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 CYB5AP00167 134 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 RAB3BP20337 219 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 BCL3P20749 454 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 OR3A4PP47883 348 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 PROK1P58294 105 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 LSM3P62310 102 aaKnown RBP10.9□□□□□ -0.66
CTSA-213ENST00000606782 BLMHQ13867 455 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 ELP2Q6IA86 826 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 HCP5Q6MZN7 132 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 ACP7Q6ZNF0 438 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 C17orf107Q6ZR85 190 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 NR2C2APQ86WQ0 139 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 Q8IYB0 196 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 ZNRF1Q8ND25 227 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 OR4D6Q8NGJ1 314 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 OR5D18Q8NGL1 313 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 TNFAIP8L1Q8WVP5 186 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 NKX3-1Q99801 234 aaPredicted RBP10.9□□□□□ -0.66
CTSA-213ENST00000606782 C16orf95Q9H693 158 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 SEBOXQ9HB31 216 aaPredicted RBP10.9□□□□□ -0.66
CTSA-213ENST00000606782 IL36GQ9NZH8 169 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 GHRLQ9UBU3 117 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 ING4Q9UNL4 249 aa10.9□□□□□ -0.66
CTSA-213ENST00000606782 A0A0G2JK05 382 aa10.89□□□□□ -0.67
CTSA-213ENST00000606782 SLC17A2O00624 439 aa10.89□□□□□ -0.67
CTSA-213ENST00000606782 CDRT1O95170 752 aa10.89□□□□□ -0.67
CTSA-213ENST00000606782 CLEC2LP0C7M8 214 aa10.89□□□□□ -0.67
CTSA-213ENST00000606782 NDUFB7P17568 137 aa10.89□□□□□ -0.67
CTSA-213ENST00000606782 SAA4P35542 130 aa10.89□□□□□ -0.67
CTSA-213ENST00000606782 TGFBR1P36897 503 aa10.89□□□□□ -0.67
CTSA-213ENST00000606782 RPS19P39019 145 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms