RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 MEGF9Q9H1U4 602 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 HMG20AQ9NP66 347 aa14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 RBFOX1Q9NWB1 397 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 PAK1IP1Q9NWT1 392 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-203ENST00000594298 H3BUX3 64 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 K7N7A8 449 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 SH2D1BO14796 132 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 ANGPTL7O43827 346 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 HAND1O96004 215 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 OPN1MWP04001 364 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 TK1P04183 234 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 OPN1MW2P0DN77 364 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 OPN1MW3P0DN78 364 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 CEBPDP49716 269 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 RPS11P62280 158 aaKnown RBP eCLIP14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 COL10A1Q03692 680 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 ZNF146Q15072 292 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 AANATQ16613 207 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 FBLN7Q53RD9 439 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 ASCC1Q8N9N2 400 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 PXT1Q8NFP0 134 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 OR13C5Q8NGS8 318 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 AJUBAQ96IF1 538 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 SNX22Q96L94 193 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 S100A13Q99584 98 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 SSX3Q99909 188 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 RANBP3Q9H6Z4 567 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 ISYNA1Q9NPH2 558 aa14.26□□□□□ -0.13
SHKBP1-203ENST00000594298 DENRO43583 198 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 ZNF93P35789 620 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 MTNR1BP49286 362 aa14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 ZP1P60852 638 aa14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 DDI2Q5TDH0 399 aa14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 CRIP3Q6Q6R5 217 aa14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 GDPD3Q7L5L3 318 aa14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 FAM185AQ8N0U4 392 aa14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 OR51A2Q8NGJ7 313 aa14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 TNFAIP8L1Q8WVP5 186 aa14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 C17orf50Q8WW18 174 aa14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 UFD1Q92890 307 aa14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 OR14A2Q96R54 314 aa14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 RAB18Q9NP72 206 aa14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 EXOSC4Q9NPD3 245 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 PCDHB16Q9NRJ7 776 aa14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 FOXJ3Q9UPW0 622 aa14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 GSTK1Q9Y2Q3 226 aa14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 LSM2Q9Y333 95 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-203ENST00000594298 TRBV5-7A0A0A0MS05 114 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 IGKV1-12A0A0C4DH73 117 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 hCG_1809904A0A1W2PP81 198 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 A0A1W2PPE2 198 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 A0A1W2PR64 198 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 A0A1W2PRV1 198 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 G3V4G9 280 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 MRPS14O60783 128 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 IGKV1D-12P01611 117 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 IGFBP3P17936 291 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 FSTP19883 344 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 RPL31P62899 125 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 RSU1Q15404 277 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 LRRC75BQ2VPJ9 315 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 SAMD5Q5TGI4 173 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 CDH26Q8IXH8 852 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 OR52N4Q8NGI2 321 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 OR4C13Q8NGP0 309 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 SGCDQ92629 289 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 OR5M11Q96RB7 305 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 YTHDF1Q9BYJ9 559 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 ELL3Q9HB65 397 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 SIGLEC9Q9Y336 463 aa14.24□□□□□ -0.13
SHKBP1-203ENST00000594298 GABRPO00591 440 aa14.23□□□□□ -0.13
SHKBP1-203ENST00000594298 ZNF737O75373 536 aa14.23□□□□□ -0.13
SHKBP1-203ENST00000594298 GABRR1P24046 479 aa14.23□□□□□ -0.13
SHKBP1-203ENST00000594298 PTGFRP43088 359 aa14.23□□□□□ -0.13
SHKBP1-203ENST00000594298 DOC2BQ14184 412 aa14.23□□□□□ -0.13
SHKBP1-203ENST00000594298 ELP2Q6IA86 826 aa14.23□□□□□ -0.13
SHKBP1-203ENST00000594298 LIAT1Q6ZQX7 453 aa14.23□□□□□ -0.13
SHKBP1-203ENST00000594298 RNF144BQ7Z419 303 aa14.23□□□□□ -0.13
SHKBP1-203ENST00000594298 OR8H2Q8N162 312 aa14.23□□□□□ -0.13
SHKBP1-203ENST00000594298 DTX3Q8N9I9 347 aa14.23□□□□□ -0.13
SHKBP1-203ENST00000594298 OR2T6Q8NHC8 308 aa14.23□□□□□ -0.13
SHKBP1-203ENST00000594298 DERL3Q96Q80 235 aa14.23□□□□□ -0.13
SHKBP1-203ENST00000594298 FAM192AQ9GZU8 254 aa14.23□□□□□ -0.13
SHKBP1-203ENST00000594298 METTL9Q9H1A3 318 aa14.23□□□□□ -0.13
SHKBP1-203ENST00000594298 ING4Q9UNL4 249 aa14.23□□□□□ -0.13
SHKBP1-203ENST00000594298 FUOMA2VDF0 154 aa14.22□□□□□ -0.13
SHKBP1-203ENST00000594298 MEGF11A6BM72 1044 aa14.22□□□□□ -0.13
SHKBP1-203ENST00000594298 ZNF780AO75290 641 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-203ENST00000594298 HSMCR30P0CW71 290 aa14.22□□□□□ -0.13
SHKBP1-203ENST00000594298 CALCBP10092 127 aa14.22□□□□□ -0.13
SHKBP1-203ENST00000594298 DUSP1P28562 367 aa14.22□□□□□ -0.13
SHKBP1-203ENST00000594298 SNU13P55769 128 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-203ENST00000594298 GABARAPL2P60520 117 aa14.22□□□□□ -0.13
SHKBP1-203ENST00000594298 TRAM1Q15629 374 aa14.22□□□□□ -0.13
SHKBP1-203ENST00000594298 ACSM3Q53FZ2 586 aa14.22□□□□□ -0.13
SHKBP1-203ENST00000594298 ASCL4Q6XD76 172 aa14.22□□□□□ -0.13
SHKBP1-203ENST00000594298 KLHDC1Q8N7A1 406 aa14.22□□□□□ -0.13
SHKBP1-203ENST00000594298 CHST4Q8NCG5 386 aa14.22□□□□□ -0.13
SHKBP1-203ENST00000594298 TMED9Q9BVK6 235 aa14.22□□□□□ -0.13
SHKBP1-203ENST00000594298 C19orf12Q9NSK7 152 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms