RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 SAP30O75446 220 aa9.52□□□□□ -0.89
PRPF8-208ENST00000573716 E2F6O75461 281 aa9.52□□□□□ -0.89
PRPF8-208ENST00000573716 GATBO75879 557 aaKnown RBP9.52□□□□□ -0.89
PRPF8-208ENST00000573716 RPP14O95059 124 aaKnown RBP9.52□□□□□ -0.89
PRPF8-208ENST00000573716 HMGN1P05114 100 aa9.52□□□□□ -0.89
PRPF8-208ENST00000573716 SLC2A5P22732 501 aa9.52□□□□□ -0.89
PRPF8-208ENST00000573716 GNG10P50151 68 aa9.52□□□□□ -0.89
PRPF8-208ENST00000573716 INSL3P51460 131 aa9.52□□□□□ -0.89
PRPF8-208ENST00000573716 FUT6P51993 359 aa9.52□□□□□ -0.89
PRPF8-208ENST00000573716 MADCAM1Q13477 382 aa9.52□□□□□ -0.89
PRPF8-208ENST00000573716 SRSF7Q16629 238 aaKnown RBP eCLIP9.52□□□□□ -0.89
PRPF8-208ENST00000573716 KRBOX4Q5JUW0 171 aa9.52□□□□□ -0.89
PRPF8-208ENST00000573716 ZNF322Q6U7Q0 402 aaPredicted RBP9.52□□□□□ -0.89
PRPF8-208ENST00000573716 GIPC3Q8TF64 312 aa9.52□□□□□ -0.89
PRPF8-208ENST00000573716 CORO2AQ92828 525 aa9.52□□□□□ -0.89
PRPF8-208ENST00000573716 OR5B12Q96R08 314 aa9.52□□□□□ -0.89
PRPF8-208ENST00000573716 TMEM14AQ9Y6G1 99 aa9.52□□□□□ -0.89
PRPF8-208ENST00000573716 CSMD3Q7Z407 3707 aa9.52□□□□□ -0.89
PRPF8-208ENST00000573716 IGHV3-72A0A0B4J1Y9 119 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 TRBV2A0A0J9YWF9 115 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 TRIM64CA6NLI5 447 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 DHRS7CA6NNS2 312 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 J3QR06 171 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 SRSF10O75494 262 aaKnown RBP9.51□□□□□ -0.89
PRPF8-208ENST00000573716 OR2H2O95918 312 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 ELANEP08246 267 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 OR8U8P0C7N1 319 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 ZNF44P15621 663 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 SPNP16150 400 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 ATP6V1B2P21281 511 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 GLP1RP43220 463 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 ATP1B3P54709 279 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 CDC42P60953 191 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 CXCR4P61073 352 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 ACTR3P61158 418 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 GABPB1Q06547 395 aaPredicted RBP9.51□□□□□ -0.89
PRPF8-208ENST00000573716 ATXN7L3Q14CW9 347 aaPredicted RBP9.51□□□□□ -0.89
PRPF8-208ENST00000573716 ZNF146Q15072 292 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 SPIN3Q5JUX0 258 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 TMEM236Q5W0B7 351 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 CD300LDQ6UXZ3 194 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 MOB3BQ86TA1 216 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 ADI1Q9BV57 179 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 CCDC134Q9H6E4 229 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 SNX5Q9Y5X3 404 aa9.51□□□□□ -0.89
PRPF8-208ENST00000573716 ZNF729A6NN14 1252 aaPredicted RBP9.5□□□□□ -0.89
PRPF8-208ENST00000573716 SYT7O43581 403 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 SERPINA3P01011 423 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 GP9P14770 177 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 VDAC1P21796 283 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 MAGEA2P43356 314 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 REG1BP48304 166 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 RAB7AP51149 207 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 MTCP1P56278 107 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 FHL3Q13643 280 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 C17orf58Q2M2W7 97 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 ZNF429Q86V71 674 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 OR8H3Q8N146 312 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 OR1N2Q8NGR9 330 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 OR10X1Q8NGY0 326 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 RFT1Q96AA3 541 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 COQ2Q96H96 371 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 KIRREL1Q96J84 757 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 CNN2Q99439 309 aaKnown RBP9.5□□□□□ -0.89
PRPF8-208ENST00000573716 TEX12Q9BXU0 123 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 PPIL3Q9H2H8 161 aaKnown RBP9.5□□□□□ -0.89
PRPF8-208ENST00000573716 EDA2RQ9HAV5 297 aa9.5□□□□□ -0.89
PRPF8-208ENST00000573716 SEBOXQ9HB31 216 aaPredicted RBP9.5□□□□□ -0.89
PRPF8-208ENST00000573716 A0A087X0M5 115 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 A0A1B0GX30 115 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 A0A1W2PPE3 182 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 CCDC182A6NF36 153 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 HSPB6O14558 160 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 LDLRAD4O15165 306 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 PRDX6P30041 224 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 RBP2P50120 134 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 ZNF616Q08AN1 781 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 FAM53AQ6NSI3 398 aaPredicted RBP9.49□□□□□ -0.89
PRPF8-208ENST00000573716 TGIF2LXQ8IUE1 241 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 SLC35F2Q8IXU6 374 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 PGAM4Q8N0Y7 254 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 YIPF7Q8N8F6 280 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 RNF152Q8N8N0 203 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 HAVCR2Q8TDQ0 301 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 DCUN1D4Q92564 292 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 EAF1Q96JC9 268 aaPredicted RBP9.49□□□□□ -0.89
PRPF8-208ENST00000573716 RASL11BQ9BPW5 248 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 TM2D3Q9BRN9 247 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 CHST5Q9GZS9 411 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 ABCG5Q9H222 651 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 NEK6Q9HC98 313 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 HMG20AQ9NP66 347 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 LIN7CQ9NUP9 197 aaKnown RBP9.49□□□□□ -0.89
PRPF8-208ENST00000573716 TVP23BQ9NYZ1 205 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 OR6C3Q9NZP0 311 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 PSG11Q9UQ72 335 aa9.49□□□□□ -0.89
PRPF8-208ENST00000573716 KBTBD11-OT1A0A1B0GTJ5 212 aa9.48□□□□□ -0.89
PRPF8-208ENST00000573716 ZNF670-ZNF695F2Z2N8 137 aa9.48□□□□□ -0.89
PRPF8-208ENST00000573716 OVOL1O14753 267 aa9.48□□□□□ -0.89
PRPF8-208ENST00000573716 IGHG4P01861 327 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms