RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 DUX1O43812 170 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 GDF9O60383 454 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 FUT7Q11130 342 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 TRA2AQ13595 282 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINC00554-201ENST00000564841 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.15□□□□□ -0.14
LINC00554-201ENST00000564841 TBL1XR1Q9BZK7 514 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 TWSG1Q9GZX9 223 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 FGF21Q9NSA1 209 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 PLA2G3Q9NZ20 509 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 PRRC2CQ9Y520 2896 aaKnown RBP14.15□□□□□ -0.14
LINC00554-201ENST00000564841 H3BML4 177 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 CLDN34H7C241 214 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 M0R143 59 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 ST8SIA3O43173 380 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 SCGNO76038 276 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 PRSS12P56730 875 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 GNB2P62879 340 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 CLN3Q13286 438 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 GUSBP11Q6P575 273 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 OR5C1Q8NGR4 320 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 BOD1Q96IK1 185 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 C5orf34Q96MH7 638 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 GLRX2Q9NS18 164 aa14.15□□□□□ -0.14
LINC00554-201ENST00000564841 GZMHP20718 246 aa14.15□□□□□ -0.15
LINC00554-201ENST00000564841 POU3F1Q03052 451 aaPredicted RBP14.15□□□□□ -0.15
LINC00554-201ENST00000564841 HERPUD1Q15011 391 aa14.15□□□□□ -0.15
LINC00554-201ENST00000564841 BATFQ16520 125 aa14.15□□□□□ -0.15
LINC00554-201ENST00000564841 FAM90A2PQ658T7 463 aa14.15□□□□□ -0.15
LINC00554-201ENST00000564841 ZNF66Q6ZN08 573 aa14.15□□□□□ -0.15
LINC00554-201ENST00000564841 MRPL41Q8IXM3 137 aaKnown RBP14.15□□□□□ -0.15
LINC00554-201ENST00000564841 PRR18Q8N4B5 295 aa14.15□□□□□ -0.15
LINC00554-201ENST00000564841 RCC1LQ96I51 464 aaKnown RBP14.15□□□□□ -0.15
LINC00554-201ENST00000564841 LAMP3Q9UQV4 416 aa14.15□□□□□ -0.15
LINC00554-201ENST00000564841 TMED7-TICAM2A0A0A6YYA0 188 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 ZNF850A8MQ14 1090 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 GNG10P50151 68 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 MFAP5Q13361 173 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 GPR157Q5UAW9 335 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 ZNF705AQ6ZN79 300 aaPredicted RBP14.14□□□□□ -0.15
LINC00554-201ENST00000564841 FAM185AQ8N0U4 392 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 OR8B12Q8NGG6 310 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 DIRC2Q96SL1 478 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 URM1Q9BTM9 101 aaKnown RBP14.14□□□□□ -0.15
LINC00554-201ENST00000564841 ZNF665Q9H7R5 613 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 DXOO77932 396 aaKnown RBP14.14□□□□□ -0.15
LINC00554-201ENST00000564841 CTSDP07339 412 aaPredicted RBP14.14□□□□□ -0.15
LINC00554-201ENST00000564841 ABCA11PQ4W5N1 156 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 LYSMD4Q5XG99 296 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 ABLIM2Q6H8Q1 611 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 SLC35E3Q7Z769 313 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 PLXDC1Q8IUK5 500 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 OR2C3Q8N628 320 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 ADGRG7Q96K78 797 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 FAAP24Q9BTP7 215 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 CDH20Q9HBT6 801 aa14.14□□□□□ -0.15
LINC00554-201ENST00000564841 TMEM131Q92545 1883 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 A0A1B0GU03 582 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 SSSCA1O60232 199 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 DFFBO76075 338 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 SCGB1D1O95968 90 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 PDCD1Q15116 288 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 ZNF506Q5JVG8 444 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 OR14L1PQ8NHC6 308 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 ELOVL1Q9BW60 279 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 FER1L5A0AVI2 2057 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 NKX2-6A6NCS4 301 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 PHF1O43189 567 aaPredicted RBP14.13□□□□□ -0.15
LINC00554-201ENST00000564841 HLA-HP01893 362 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 HSPB1P04792 205 aaKnown RBP14.13□□□□□ -0.15
LINC00554-201ENST00000564841 SELEP16581 610 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 PLCXD2Q0VAA5 305 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 RTP5Q14D33 572 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 CXorf66Q5JRM2 361 aaPredicted RBP14.13□□□□□ -0.15
LINC00554-201ENST00000564841 HLA-DQA1Q5Y7H0 255 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 CRIP3Q6Q6R5 217 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 LCN15Q6UWW0 184 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 FAM57BQ71RH2 274 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 OR10A7Q8NGE5 316 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 FBLN5Q9UBX5 448 aa14.13□□□□□ -0.15
LINC00554-201ENST00000564841 PROB1E7EW31 1015 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 MS4A18H0YCH9 400 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 CA11O75493 328 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 FGF5P12034 268 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 DYNLT3P51808 116 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 ZNF121P58317 390 aaPredicted RBP14.12□□□□□ -0.15
LINC00554-201ENST00000564841 HNF4GQ14541 408 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 MS4A18Q3C1V0 323 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 C9orf40Q8IXQ3 194 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 CMTM1Q8IZ96 169 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 RNASEH2CQ8TDP1 164 aaKnown RBP14.12□□□□□ -0.15
LINC00554-201ENST00000564841 PIGTQ969N2 578 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 NAA60Q9H7X0 242 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 TMEM265A0A087WTH1 108 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 FAM230AA0A1W2PPH8 454 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 RER1O15258 196 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 GLB1P16278 677 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 TFPI2P48307 235 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 RAB35Q15286 201 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 KISS1Q15726 138 aa14.12□□□□□ -0.15
LINC00554-201ENST00000564841 TDRG1Q3Y452 100 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms