RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 Q6ZQT7 251 aa2.45□□□□□ -2.02
LINC00557-201ENST00000563184 RBM45Q8IUH3 476 aaKnown RBP2.45□□□□□ -2.02
LINC00557-201ENST00000563184 OR8G5Q8NG78 346 aa2.45□□□□□ -2.02
LINC00557-201ENST00000563184 OR2AE1Q8NHA4 323 aa2.45□□□□□ -2.02
LINC00557-201ENST00000563184 ANAPC13Q9BS18 74 aa2.45□□□□□ -2.02
LINC00557-201ENST00000563184 GABARAPL1Q9H0R8 117 aa2.45□□□□□ -2.02
LINC00557-201ENST00000563184 NXT1Q9UKK6 140 aaKnown RBP2.45□□□□□ -2.02
LINC00557-201ENST00000563184 C14orf166Q9Y224 244 aaKnown RBP2.45□□□□□ -2.02
LINC00557-201ENST00000563184 PCNX2A6NKB5 2137 aa2.45□□□□□ -2.02
LINC00557-201ENST00000563184 TRIOBPQ9H2D6 2365 aa2.45□□□□□ -2.02
LINC00557-201ENST00000563184 YLPM1P49750 1951 aaKnown RBP2.45□□□□□ -2.02
LINC00557-201ENST00000563184 SPATA31E1Q6ZUB1 1445 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 H3BP45 60 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 PSMD11O00231 422 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 SHOX2O60902 331 aaPredicted RBP2.44□□□□□ -2.02
LINC00557-201ENST00000563184 IVLP07476 585 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 CCDC172P0C7W6 258 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 SCGB1C2P0DMR2 95 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 CCL2P13500 99 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 TTPAP49638 278 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 PLTPP55058 493 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 KRTAP12-3P60328 96 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 DHRS2Q13268 280 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 LRP11Q86VZ4 500 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 LYPD6Q86Y78 171 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 CPNE9Q8IYJ1 553 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 ST13P4Q8IZP2 240 aaPredicted RBP2.44□□□□□ -2.02
LINC00557-201ENST00000563184 OR4K17Q8NGC6 315 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 LRRC20Q8TCA0 184 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 SCGB1C1Q8TD33 95 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 TWIST2Q8WVJ9 160 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 NELFBQ8WX92 580 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 ZMYND19Q96E35 227 aaPredicted RBP2.44□□□□□ -2.02
LINC00557-201ENST00000563184 ULBP1Q9BZM6 244 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 SLC25A31Q9H0C2 315 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 RHOFQ9HBH0 211 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 DIABLOQ9NR28 239 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
LINC00557-201ENST00000563184 TRAV8-3A0A0A6YYJ7 113 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 RAB19A4D1S5 217 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 H3BMM0 161 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 M0QXV9 152 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 CDIPTO14735 213 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 GIMD1P0DJR0 217 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 MLNP12872 115 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 GTF2F2P13984 249 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 ELK4P28324 431 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 LCN1P31025 176 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 ZNF83P51522 516 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 BAXQ07812 192 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 LGALSLQ3ZCW2 172 aaPredicted RBP2.43□□□□□ -2.02
LINC00557-201ENST00000563184 PDCL2Q8N4E4 241 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 CDRT4Q8N9R6 151 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 OR5P2Q8WZ92 322 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 UBE2WQ96B02 151 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 OLFM3Q96PB7 478 aa2.43□□□□□ -2.02
LINC00557-201ENST00000563184 MCTS1Q9ULC4 181 aaKnown RBP2.43□□□□□ -2.02
LINC00557-201ENST00000563184 DOCK6Q96HP0 2047 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 A0A1B0GW15 77 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 CA2P00918 260 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 S100A9P06702 114 aaKnown RBP2.42□□□□□ -2.02
LINC00557-201ENST00000563184 GABRA1P14867 456 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 TSPOP30536 169 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 CASP8Q14790 479 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 HBMQ6B0K9 141 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 ZIC4Q8N9L1 334 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 Q8NAQ8 132 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 BPIFB6Q8NFQ5 453 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 APOBEC3DQ96AK3 386 aaPredicted RBP2.42□□□□□ -2.02
LINC00557-201ENST00000563184 MSANTD3Q96H12 275 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 SLC25A44Q96H78 314 aaPredicted RBP2.42□□□□□ -2.02
LINC00557-201ENST00000563184 PYURFQ96I23 114 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 TRIB3Q96RU7 358 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 SIKE1Q9BRV8 207 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 SUCNR1Q9BXA5 334 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 TSSK6Q9BXA6 273 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 MFSD1Q9H3U5 465 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 U3KQK5 164 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 LTBP2Q14767 1821 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 ATRNO75882 1429 aa2.42□□□□□ -2.02
LINC00557-201ENST00000563184 IGKV1D-37A0A075B6S9 117 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 A0A1B0GU33 70 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 E7EQL1 145 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 SYNGR2O43760 224 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 PSIP1O75475 530 aaKnown RBP2.41□□□□□ -2.02
LINC00557-201ENST00000563184 CTLA4P16410 223 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 GTF2H1P32780 548 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 VSNL1P62760 191 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 TNNC1P63316 161 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 CEACAM21Q3KPI0 293 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 NXNL2Q5VZ03 156 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 OR2Y1Q8NGV0 311 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 OR2D2Q9H210 308 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 XKR8Q9H6D3 395 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 HAUS4Q9H6D7 363 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 TMBIM4Q9HC24 238 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 OR5V1Q9UGF6 321 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 FADS3Q9Y5Q0 445 aa2.41□□□□□ -2.02
LINC00557-201ENST00000563184 POLR3AO14802 1390 aaPredicted RBP2.4□□□□□ -2.02
LINC00557-201ENST00000563184 IGHV1-45A0A0A0MS14 117 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms