RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 NEU3Q9UQ49 428 aa11.17□□□□□ -0.62
SYNM-203ENST00000560674 WNK3Q9BYP7 1800 aa11.17□□□□□ -0.62
SYNM-203ENST00000560674 CDRT15L2A8MXV6 281 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 IGF2P01344 180 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 VDAC1P21796 283 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 HYAL1Q12794 435 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 GAMTQ14353 236 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 ELOBQ15370 118 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 CD226Q15762 336 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 NUBPLQ8TB37 319 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 SLC26A1Q9H2B4 701 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 VAX2Q9UIW0 290 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 RAC3P60763 192 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 DLK1P80370 383 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 LSM11P83369 360 aaKnown RBP eCLIP11.16□□□□□ -0.62
SYNM-203ENST00000560674 LGALSLQ3ZCW2 172 aaPredicted RBP11.16□□□□□ -0.62
SYNM-203ENST00000560674 CCL17Q92583 94 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 DPF1Q92782 380 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 TRBV5-3A0A0A0MS03 114 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 C3orf80F5H4A9 247 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 K7ESF4 209 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 PLA2G10O15496 165 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 OR1B1Q8NGR6 318 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 PACRGQ96M98 296 aaPredicted RBP11.16□□□□□ -0.62
SYNM-203ENST00000560674 TMEM191AQ9H0A3 160 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 AMDHD2Q9Y303 409 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 LINC00862A6NCI5 91 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 LIPT2A6NK58 231 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 DRD3P35462 400 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 HLA-DRB5Q30154 266 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 VSTM2AQ8TAG5 236 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 PTP4A1Q93096 173 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 VSTM2LQ96N03 204 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 FAM60AQ9NP50 221 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 NAGKQ9UJ70 344 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 A0A087X0M5 115 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 A0A1B0GX30 115 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 C7orf77A4D0Y5 90 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 OOEPA6NGQ2 149 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 OR2T8A6NH00 312 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 GEMIN2O14893 280 aaKnown RBP11.16□□□□□ -0.62
SYNM-203ENST00000560674 ZNF253O75346 499 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 SMIM6P0DI80 62 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 DAOP14920 347 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 PRSS12P56730 875 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 SKP2Q13309 424 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 OR10A7Q8NGE5 316 aa11.16□□□□□ -0.62
SYNM-203ENST00000560674 KIF13BQ9NQT8 1826 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 ZNF716A6NP11 495 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 COX7A1P24310 79 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 PSG6Q00889 435 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 TMEM108Q6UXF1 575 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 GAPTQ8N292 157 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 ZNF784Q8NCA9 323 aaPredicted RBP11.15□□□□□ -0.62
SYNM-203ENST00000560674 DTD1Q8TEA8 209 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 MRPL24Q96A35 216 aaKnown RBP11.15□□□□□ -0.62
SYNM-203ENST00000560674 SF3B5Q9BWJ5 86 aaKnown RBP11.15□□□□□ -0.62
SYNM-203ENST00000560674 ANGPTL4Q9BY76 406 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 CLEC5AQ9NY25 188 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 CACNA1CQ13936 2221 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 OR4C45A6NMZ5 311 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 MS4A18H0YCH9 400 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 CELA2BP08218 269 aaPredicted RBP11.15□□□□□ -0.62
SYNM-203ENST00000560674 COL9A1P20849 921 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 SULT1A1P50225 295 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 MRPS11P82912 194 aaKnown RBP11.15□□□□□ -0.62
SYNM-203ENST00000560674 MS4A18Q3C1V0 323 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 CYR61O00622 381 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 MT-CO3P00414 261 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 PPYP01298 95 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 ZNF250P15622 560 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 C1QL3Q5VWW1 255 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 SRD5A3Q9H8P0 318 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 SIRT7Q9NRC8 400 aa11.15□□□□□ -0.62
SYNM-203ENST00000560674 PPIHO43447 177 aaKnown RBP11.15□□□□□ -0.63
SYNM-203ENST00000560674 ADAM11O75078 769 aa11.15□□□□□ -0.63
SYNM-203ENST00000560674 NTN1O95631 604 aa11.15□□□□□ -0.63
SYNM-203ENST00000560674 IGHV3-13P01766 116 aa11.15□□□□□ -0.63
SYNM-203ENST00000560674 IGHV3-7P01780 117 aa11.15□□□□□ -0.63
SYNM-203ENST00000560674 PPOXP50336 477 aa11.15□□□□□ -0.63
SYNM-203ENST00000560674 FOXO1Q12778 655 aa11.15□□□□□ -0.63
SYNM-203ENST00000560674 MPV17LQ2QL34 196 aa11.15□□□□□ -0.63
SYNM-203ENST00000560674 ANKRD55Q3KP44 614 aa11.15□□□□□ -0.63
SYNM-203ENST00000560674 SNX22Q96L94 193 aa11.15□□□□□ -0.63
SYNM-203ENST00000560674 ACTL6AO96019 429 aa11.14□□□□□ -0.63
SYNM-203ENST00000560674 CEACAM3P40198 252 aa11.14□□□□□ -0.63
SYNM-203ENST00000560674 EWSR1Q01844 656 aaKnown RBP eCLIP11.14□□□□□ -0.63
SYNM-203ENST00000560674 TNXAQ16473 311 aa11.14□□□□□ -0.63
SYNM-203ENST00000560674 ISXQ2M1V0 245 aa11.14□□□□□ -0.63
SYNM-203ENST00000560674 RHBDD2Q6NTF9 364 aa11.14□□□□□ -0.63
SYNM-203ENST00000560674 WASHC3Q9Y3C0 194 aa11.14□□□□□ -0.63
SYNM-203ENST00000560674 CCL27Q9Y4X3 112 aa11.14□□□□□ -0.63
SYNM-203ENST00000560674 TCL1AP56279 114 aa11.14□□□□□ -0.63
SYNM-203ENST00000560674 NXPH1P58417 271 aa11.14□□□□□ -0.63
SYNM-203ENST00000560674 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.14□□□□□ -0.63
SYNM-203ENST00000560674 PSG5Q15238 335 aa11.14□□□□□ -0.63
SYNM-203ENST00000560674 HIST3H3Q16695 136 aa11.14□□□□□ -0.63
SYNM-203ENST00000560674 CLPPQ16740 277 aaPredicted RBP11.14□□□□□ -0.63
SYNM-203ENST00000560674 TMEM92Q6UXU6 159 aa11.14□□□□□ -0.63
SYNM-203ENST00000560674 OR1L6Q8NGR2 347 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms