RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 ING3Q9NXR8 418 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 ING4Q9UNL4 249 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 SF3B6Q9Y3B4 125 aaKnown RBP9.66□□□□□ -0.86
RAB5C-204ENST00000547517 LINC00312Q9Y6C7 94 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 STAB1Q9NY15 2570 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 A0A0G2JK05 382 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 C17orf98A8MV24 154 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 PIN1P1O15428 100 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 GPX5O75715 221 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 IGHV4-59P01825 116 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 HSMCR30P0CW71 290 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 MAP2K4P45985 399 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 MEF2CQ06413 473 aaPredicted RBP9.65□□□□□ -0.86
RAB5C-204ENST00000547517 AESQ08117 197 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 IL13RA2Q14627 380 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 SLC22A6Q4U2R8 563 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 RBM48Q5RL73 367 aaKnown RBP9.65□□□□□ -0.86
RAB5C-204ENST00000547517 FAM27D1Q5T7N8 215 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 LIPKQ5VXJ0 399 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 ELP2Q6IA86 826 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 PRSS48Q7RTY5 328 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 LDLRAD3Q86YD5 345 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 CHST4Q8NCG5 386 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 SSMEM1Q8WWF3 244 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 THRSPQ92748 146 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 TAF15Q92804 592 aaKnown RBP eCLIP9.65□□□□□ -0.86
RAB5C-204ENST00000547517 MUL1Q969V5 352 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 S100A13Q99584 98 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 CHIAQ9BZP6 476 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 HEXA-AS1Q9H8Q6 139 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 ZNRD1Q9P1U0 126 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 BLOC1S6Q9UL45 172 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 FOXJ3Q9UPW0 622 aa9.65□□□□□ -0.86
RAB5C-204ENST00000547517 MRPS28Q9Y2Q9 187 aaKnown RBP9.65□□□□□ -0.86
RAB5C-204ENST00000547517 TRGV10A0A0A0MS01 117 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 TMEM89A2RUT3 159 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 CLPXO76031 633 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 RBP4P02753 201 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 CSTBP04080 98 aaKnown RBP9.64□□□□□ -0.87
RAB5C-204ENST00000547517 IGHV1-8P0DP01 117 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 LMO1P25800 156 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 ERP29P30040 261 aaKnown RBP9.64□□□□□ -0.87
RAB5C-204ENST00000547517 GLIPR1P48060 266 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 RBM11P57052 281 aaKnown RBP9.64□□□□□ -0.87
RAB5C-204ENST00000547517 MIDNQ504T8 468 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 ACSM3Q53FZ2 586 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 PAN3Q58A45 887 aaKnown RBP9.64□□□□□ -0.87
RAB5C-204ENST00000547517 KRBOX4Q5JUW0 171 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 AWAT2Q6E213 333 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 ASCL4Q6XD76 172 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 OSR2Q8N2R0 312 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 TMEM86BQ8N661 226 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 NKAIN3Q8N8D7 197 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 OR51T1Q8NGJ9 327 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 C17orf50Q8WW18 174 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 TMEM203Q969S6 136 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 COQ2Q96H96 371 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 PPIL3Q9H2H8 161 aaKnown RBP9.64□□□□□ -0.87
RAB5C-204ENST00000547517 Q9H521 79 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 IL36GQ9NZH8 169 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 ZNF581Q9P0T4 197 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 POMT1Q9Y6A1 747 aa9.64□□□□□ -0.87
RAB5C-204ENST00000547517 TRAV24A0A0B4J272 114 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 A0A1W2PP11 408 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 ODAMA1E959 279 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 FUOMA2VDF0 154 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 BTBD17A6NE02 478 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 HAX1O00165 279 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 OR7C1O76099 320 aaPredicted RBP9.63□□□□□ -0.87
RAB5C-204ENST00000547517 ARG1P05089 322 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 CSN2P05814 226 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 HKR1P10072 659 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 RPS25P62851 125 aaKnown RBP9.63□□□□□ -0.87
RAB5C-204ENST00000547517 TBCEQ15813 527 aaPredicted RBP9.63□□□□□ -0.87
RAB5C-204ENST00000547517 AWAT1Q58HT5 328 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 PRAMEF5Q5TYX0 476 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 C16orf87Q6PH81 154 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 GLIPR1L1Q6UWM5 242 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 MS4A15Q8N5U1 240 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 OR13D1Q8NGV5 346 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 DPAGT1Q9H3H5 408 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 TCF7L1Q9HCS4 588 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 ST3GAL6Q9Y274 331 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 UBE2J1Q9Y385 318 aaPredicted RBP9.63□□□□□ -0.87
RAB5C-204ENST00000547517 SESN1Q9Y6P5 492 aa9.63□□□□□ -0.87
RAB5C-204ENST00000547517 DSCAML1Q8TD84 2053 aa9.62□□□□□ -0.87
RAB5C-204ENST00000547517 FAM181BA6NEQ2 426 aa9.62□□□□□ -0.87
RAB5C-204ENST00000547517 GEMIN2O14893 280 aaKnown RBP9.62□□□□□ -0.87
RAB5C-204ENST00000547517 ZNF780AO75290 641 aaPredicted RBP9.62□□□□□ -0.87
RAB5C-204ENST00000547517 GTF2F2P13984 249 aa9.62□□□□□ -0.87
RAB5C-204ENST00000547517 PAX6P26367 422 aa9.62□□□□□ -0.87
RAB5C-204ENST00000547517 GLP1RP43220 463 aa9.62□□□□□ -0.87
RAB5C-204ENST00000547517 IER3P46695 156 aa9.62□□□□□ -0.87
RAB5C-204ENST00000547517 COMPP49747 757 aaPredicted RBP9.62□□□□□ -0.87
RAB5C-204ENST00000547517 LGALS4P56470 323 aa9.62□□□□□ -0.87
RAB5C-204ENST00000547517 MLLT11Q13015 90 aaPredicted RBP9.62□□□□□ -0.87
RAB5C-204ENST00000547517 DYNC1I2Q13409 638 aaKnown RBP9.62□□□□□ -0.87
RAB5C-204ENST00000547517 TAF9Q16594 264 aa9.62□□□□□ -0.87
RAB5C-204ENST00000547517 HSD17B12Q53GQ0 312 aa9.62□□□□□ -0.87
RAB5C-204ENST00000547517 NHLRC3Q5JS37 347 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms