RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 METTL8Q9H825 291 aaKnown RBP18.63■□□□□ 0.57
SFSWAP-204ENST00000535399 NDUFB11Q9NX14 153 aa18.63■□□□□ 0.57
SFSWAP-204ENST00000535399 TRAV24A0A0B4J272 114 aa18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 RNASEK-C17orf49H0YIS7 233 aa18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 ZNF780AO75290 641 aaPredicted RBP18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 CSTBP04080 98 aaKnown RBP18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 CD37P11049 281 aa18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 SERPINA2P20848 420 aa18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 ERP29P30040 261 aaKnown RBP18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 DLX6P56179 175 aa18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 RBM11P57052 281 aaKnown RBP18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 HILS1P60008 231 aa18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 MEF2CQ06413 473 aaPredicted RBP18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 KLRD1Q13241 179 aa18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 PDZD9Q8IXQ8 264 aa18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 TPRX1Q8N7U7 411 aa18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 SIGLECL1Q8N7X8 197 aa18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 PPA2Q9H2U2 334 aa18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 ZNF581Q9P0T4 197 aa18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 ST3GAL6Q9Y274 331 aa18.62■□□□□ 0.57
SFSWAP-204ENST00000535399 A0A1W2PPH5 198 aa18.61■□□□□ 0.57
SFSWAP-204ENST00000535399 MEX3AA1L020 520 aaKnown RBP18.61■□□□□ 0.57
SFSWAP-204ENST00000535399 CSN2P05814 226 aa18.61■□□□□ 0.57
SFSWAP-204ENST00000535399 P2RX3P56373 397 aa18.61■□□□□ 0.57
SFSWAP-204ENST00000535399 GPR176Q14439 515 aa18.61■□□□□ 0.57
SFSWAP-204ENST00000535399 AWAT2Q6E213 333 aa18.61■□□□□ 0.57
SFSWAP-204ENST00000535399 HCP5Q6MZN7 132 aa18.61■□□□□ 0.57
SFSWAP-204ENST00000535399 CD200R1LQ6Q8B3 271 aa18.61■□□□□ 0.57
SFSWAP-204ENST00000535399 MDFIQ99750 246 aa18.61■□□□□ 0.57
SFSWAP-204ENST00000535399 PCDHB16Q9NRJ7 776 aa18.61■□□□□ 0.57
SFSWAP-204ENST00000535399 hADV38S2A0JD32 116 aa18.6■□□□□ 0.57
SFSWAP-204ENST00000535399 C17orf98A8MV24 154 aa18.6■□□□□ 0.57
SFSWAP-204ENST00000535399 ARL6IP5O75915 188 aa18.6■□□□□ 0.57
SFSWAP-204ENST00000535399 GTF2F2P13984 249 aa18.6■□□□□ 0.57
SFSWAP-204ENST00000535399 PSMB9P28065 219 aa18.6■□□□□ 0.57
SFSWAP-204ENST00000535399 ERVFRD-1P60508 538 aa18.6■□□□□ 0.57
SFSWAP-204ENST00000535399 C1orf100Q5SVJ3 147 aa18.6■□□□□ 0.57
SFSWAP-204ENST00000535399 GLT8D1Q68CQ7 371 aa18.6■□□□□ 0.57
SFSWAP-204ENST00000535399 NCR3LG1Q68D85 454 aa18.6■□□□□ 0.57
SFSWAP-204ENST00000535399 FOXRED1Q96CU9 486 aaPredicted RBP18.6■□□□□ 0.57
SFSWAP-204ENST00000535399 COQ2Q96H96 371 aa18.6■□□□□ 0.57
SFSWAP-204ENST00000535399 SLITRK2Q9H156 845 aa18.6■□□□□ 0.57
SFSWAP-204ENST00000535399 IFT22Q9H7X7 185 aa18.6■□□□□ 0.57
SFSWAP-204ENST00000535399 ESM1Q9NQ30 184 aa18.6■□□□□ 0.57
SFSWAP-204ENST00000535399 MDFIC2A0A1B0GVS7 189 aa18.59■□□□□ 0.57
SFSWAP-204ENST00000535399 CCRL2O00421 344 aa18.59■□□□□ 0.57
SFSWAP-204ENST00000535399 GEMIN2O14893 280 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-204ENST00000535399 ZNF728P0DKX0 622 aa18.59■□□□□ 0.57
SFSWAP-204ENST00000535399 CALRP27797 417 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-204ENST00000535399 AESQ08117 197 aa18.59■□□□□ 0.57
SFSWAP-204ENST00000535399 DEFB112Q30KQ8 113 aa18.59■□□□□ 0.57
SFSWAP-204ENST00000535399 KRTAP24-1Q3LI83 254 aa18.59■□□□□ 0.57
SFSWAP-204ENST00000535399 PIP4P2Q8N4L2 257 aa18.59■□□□□ 0.57
SFSWAP-204ENST00000535399 ZDHHC22Q8N966 263 aa18.59■□□□□ 0.57
SFSWAP-204ENST00000535399 GFI1Q99684 422 aa18.59■□□□□ 0.57
SFSWAP-204ENST00000535399 LINC00312Q9Y6C7 94 aa18.59■□□□□ 0.57
SFSWAP-204ENST00000535399 COL6A5A8TX70 2615 aa18.59■□□□□ 0.57
SFSWAP-204ENST00000535399 HSPB6O14558 160 aa18.58■□□□□ 0.56
SFSWAP-204ENST00000535399 GLIPR1P48060 266 aa18.58■□□□□ 0.56
SFSWAP-204ENST00000535399 GUCA2AQ02747 115 aa18.58■□□□□ 0.56
SFSWAP-204ENST00000535399 MPV17LQ2QL34 196 aa18.58■□□□□ 0.56
SFSWAP-204ENST00000535399 PAN3Q58A45 887 aaKnown RBP18.58■□□□□ 0.56
SFSWAP-204ENST00000535399 LINC00596Q86U02 117 aa18.58■□□□□ 0.56
SFSWAP-204ENST00000535399 TMEM104Q8NE00 496 aa18.58■□□□□ 0.56
SFSWAP-204ENST00000535399 MRPS24Q96EL2 167 aaKnown RBP18.58■□□□□ 0.56
SFSWAP-204ENST00000535399 PRDM13Q9H4Q3 707 aa18.58■□□□□ 0.56
SFSWAP-204ENST00000535399 GHRLQ9UBU3 117 aa18.58■□□□□ 0.56
SFSWAP-204ENST00000535399 TRDV1A0A1B0GX56 115 aa18.57■□□□□ 0.56
SFSWAP-204ENST00000535399 FUOMA2VDF0 154 aa18.57■□□□□ 0.56
SFSWAP-204ENST00000535399 OR7C1O76099 320 aaPredicted RBP18.57■□□□□ 0.56
SFSWAP-204ENST00000535399 RBP4P02753 201 aa18.57■□□□□ 0.56
SFSWAP-204ENST00000535399 UBE2E1P51965 193 aa18.57■□□□□ 0.56
SFSWAP-204ENST00000535399 ATXN7L3Q14CW9 347 aaPredicted RBP18.57■□□□□ 0.56
SFSWAP-204ENST00000535399 KRBOX4Q5JUW0 171 aa18.57■□□□□ 0.56
SFSWAP-204ENST00000535399 RBMS3Q6XE24 437 aaKnown RBP18.57■□□□□ 0.56
SFSWAP-204ENST00000535399 PNKDQ8N490 385 aa18.57■□□□□ 0.56
SFSWAP-204ENST00000535399 CORO2AQ92828 525 aa18.57■□□□□ 0.56
SFSWAP-204ENST00000535399 ZNF714Q96N38 554 aa18.57■□□□□ 0.56
SFSWAP-204ENST00000535399 JMJD8Q96S16 334 aa18.57■□□□□ 0.56
SFSWAP-204ENST00000535399 BANF2Q9H503 90 aa18.57■□□□□ 0.56
SFSWAP-204ENST00000535399 hCG_1809904A0A1W2PP81 198 aa18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 A0A1W2PPE2 198 aa18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 A0A1W2PR64 198 aa18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 A0A1W2PRD5 423 aa18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 A0A1W2PRF3 423 aa18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 A0A1W2PRM7 423 aa18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 A0A1W2PRV1 198 aa18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 ODAMA1E959 279 aa18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 NPFFO15130 113 aa18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 SLC22A1O15245 554 aa18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 GALP22466 123 aa18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 TAF9Q16594 264 aa18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 SYT6Q5T7P8 510 aaPredicted RBP18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 SUMF2Q8NBJ7 301 aa18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 TMEM158Q8WZ71 300 aa18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 DPCDQ9BVM2 203 aaPredicted RBP18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 UBE2J1Q9Y385 318 aaPredicted RBP18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 AK6Q9Y3D8 172 aaKnown RBP18.56■□□□□ 0.56
SFSWAP-204ENST00000535399 A0A0U1RQK1 487 aa18.55■□□□□ 0.56
SFSWAP-204ENST00000535399 RNF212BA8MTL3 300 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms