RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 TNFSF8P32971 234 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 TGFBR1P36897 503 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 CBX5P45973 191 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 OR3A4PP47883 348 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 PITPNBP48739 271 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 EFNA4P52798 201 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 CAV3P56539 151 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 CLDN12P56749 244 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 DSCR9P59020 149 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 KRTAP10-7P60409 375 aaPredicted RBP3.21□□□□□ -1.9
C11orf54-204ENST00000527003 RAP2BP61225 183 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 ERVK11-1P61568 191 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 MRPS15P82914 257 aaKnown RBP3.21□□□□□ -1.9
C11orf54-204ENST00000527003 SSBP1Q04837 148 aaKnown RBP3.21□□□□□ -1.9
C11orf54-204ENST00000527003 RBM39Q14498 530 aaKnown RBP3.21□□□□□ -1.9
C11orf54-204ENST00000527003 ZNF846Q147U1 533 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 ZNF146Q15072 292 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 PNLIPRP3Q17RR3 467 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 MICBQ29980 383 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 BEAN1Q3B7T3 259 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 TMEM69Q5SWH9 247 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 ATPAF1Q5TC12 328 aaPredicted RBP3.21□□□□□ -1.9
C11orf54-204ENST00000527003 HACD4Q5VWC8 232 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 C11orf71Q6IPW1 123 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 PYHIN1Q6K0P9 492 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 KRTAP5-11Q6L8G4 156 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 WDR82Q6UXN9 313 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 CCDC190Q86UF4 302 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 MOGAT3Q86VF5 341 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 CALHM1Q8IU99 346 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 C11orf53Q8IXP5 236 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 OSR2Q8N2R0 312 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 MUC20Q8N307 709 aaPredicted RBP3.21□□□□□ -1.9
C11orf54-204ENST00000527003 GDPD1Q8N9F7 314 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 OR51T1Q8NGJ9 327 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 OR5D13Q8NGL4 314 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 PPP1R35Q8TAP8 253 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 LGALS14Q8TCE9 139 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 LRRC29Q8WV35 223 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 ITLN1Q8WWA0 313 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 DEDD2Q8WXF8 326 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 GTF3AQ92664 365 aaKnown RBP3.21□□□□□ -1.9
C11orf54-204ENST00000527003 NEUROG1Q92886 237 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 RAB3CQ96E17 227 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 TIMD4Q96H15 378 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 C1orf147Q96MC9 270 aaPredicted RBP3.21□□□□□ -1.9
C11orf54-204ENST00000527003 NEDD4LQ96PU5 975 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 SPACA5Q96QH8 159 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 VRK1Q99986 396 aaPredicted RBP3.21□□□□□ -1.9
C11orf54-204ENST00000527003 CCDC32Q9BV29 185 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 SELENOIQ9C0D9 397 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 DNTTIP1Q9H147 329 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 ATG5Q9H1Y0 275 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 PLEKHF2Q9H8W4 249 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 UBTD1Q9HAC8 227 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 SCPEP1Q9HB40 452 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 HES4Q9HCC6 221 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.21□□□□□ -1.9
C11orf54-204ENST00000527003 C1orf123Q9NWV4 160 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 TREM2Q9NZC2 230 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 MTCH1Q9NZJ7 389 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 MYEF2Q9P2K5 600 aaKnown RBP3.21□□□□□ -1.9
C11orf54-204ENST00000527003 DNAJB11Q9UBS4 358 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 DKK2Q9UBU2 259 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 ZNF107Q9UII5 783 aaPredicted RBP3.21□□□□□ -1.9
C11orf54-204ENST00000527003 RALYQ9UKM9 306 aaKnown RBP3.21□□□□□ -1.9
C11orf54-204ENST00000527003 HSF4Q9ULV5 492 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 MGAT4AQ9UM21 535 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 LAMP3Q9UQV4 416 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 ST3GAL6Q9Y274 331 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 COL12A1Q99715 3063 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 FLNCQ14315 2725 aa3.21□□□□□ -1.9
C11orf54-204ENST00000527003 HELZ2Q9BYK8 2649 aaKnown RBP3.2□□□□□ -1.9
C11orf54-204ENST00000527003 PRR14LQ5THK1 2151 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 PPIAL4EA0A075B759 164 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 IGKV1-12A0A0C4DH73 117 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 A1L4Q6 167 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 SMIM30A4D0T7 59 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 NKX6-3A6NJ46 265 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 MCRIP1C9JLW8 97 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 PPIAL4DF5H284 164 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 H0YL77 283 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 TMEM178BH3BS89 294 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 PYCARD-AS1I3L0S3 204 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 RAB27BO00194 218 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 LGALS8O00214 317 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 NDUFS8O00217 210 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 SPRY1O43609 319 aaPredicted RBP3.2□□□□□ -1.9
C11orf54-204ENST00000527003 SYNGR1O43759 233 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 ANGPTL7O43827 346 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 HPGDSO60760 199 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 PDCD6O75340 191 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 IGKV1D-12P01611 117 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 SFTPBP07988 381 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 SOD3P08294 240 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 MELTFP08582 738 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 GSTT2BP0CG30 244 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 RNF224P0DH78 156 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 PPIAL4FP0DN26 164 aa3.2□□□□□ -1.9
C11orf54-204ENST00000527003 DAOP14920 347 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms