RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 ZNF561Q8N587 486 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 TPRX1Q8N7U7 411 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 SAMD12Q8N8I0 201 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 SUMF2Q8NBJ7 301 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 NEK7Q8TDX7 302 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 MED30Q96HR3 178 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 SNX22Q96L94 193 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 SSBP3Q9BWW4 388 aaPredicted RBP11.39□□□□□ -0.59
CD44-224ENST00000526669 RHBDL2Q9NX52 303 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 FBLN5Q9UBX5 448 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 CLN8Q9UBY8 286 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 SPATA2Q9UM82 520 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 PEX16Q9Y5Y5 336 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 ETV7Q9Y603 341 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 F8P00451 2351 aa11.39□□□□□ -0.59
CD44-224ENST00000526669 A0A075B6Q4 140 aa11.38□□□□□ -0.59
CD44-224ENST00000526669 UBE2QL1A1L167 161 aa11.38□□□□□ -0.59
CD44-224ENST00000526669 K7N7A8 449 aa11.38□□□□□ -0.59
CD44-224ENST00000526669 HPGDSO60760 199 aa11.38□□□□□ -0.59
CD44-224ENST00000526669 TK1P04183 234 aa11.38□□□□□ -0.59
CD44-224ENST00000526669 HEXAP06865 529 aa11.38□□□□□ -0.59
CD44-224ENST00000526669 ZFP36P26651 326 aaKnown RBP11.38□□□□□ -0.59
CD44-224ENST00000526669 RAB12Q6IQ22 244 aa11.38□□□□□ -0.59
CD44-224ENST00000526669 C6orf201Q7Z4U5 140 aa11.38□□□□□ -0.59
CD44-224ENST00000526669 CMTM4Q8IZR5 234 aa11.38□□□□□ -0.59
CD44-224ENST00000526669 CHST4Q8NCG5 386 aa11.38□□□□□ -0.59
CD44-224ENST00000526669 OR4M1Q8NGD0 313 aa11.38□□□□□ -0.59
CD44-224ENST00000526669 PLPPR1Q8TBJ4 325 aa11.38□□□□□ -0.59
CD44-224ENST00000526669 KCTD12Q96CX2 325 aaKnown RBP11.38□□□□□ -0.59
CD44-224ENST00000526669 DPCDQ9BVM2 203 aaPredicted RBP11.38□□□□□ -0.59
CD44-224ENST00000526669 SHARPINQ9H0F6 387 aa11.38□□□□□ -0.59
CD44-224ENST00000526669 MAST4O15021 2626 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 FAM90A10PA6NDY2 464 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 FAM90A18PA6NE21 464 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 FAM90A16PA6NEW6 464 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 FAM90A20PA6NIJ5 464 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 FAM90A8PA6NJQ4 464 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 FAM90A7PA6NKC0 464 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 FAM90A22PA8MWA6 464 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 KIAA1324LA8MWY0 1029 aaPredicted RBP11.37□□□□□ -0.59
CD44-224ENST00000526669 FAM90A12PA8MX19 464 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 FAM90A5PA8MXJ8 464 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 FAM90A23PA8MXZ1 464 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 PDCD6O75340 191 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 EIF4EP06730 217 aaKnown RBP11.37□□□□□ -0.59
CD44-224ENST00000526669 FAM90A15PP0C7V4 464 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 FAM90A13PP0C7W8 464 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 FAM90A14PP0C7W9 464 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 FAM90A24PP0C7X0 464 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 IGHV4-31P0DP07 118 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 ZNF16P17020 682 aaPredicted RBP11.37□□□□□ -0.59
CD44-224ENST00000526669 LMO1P25800 156 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 CHATP28329 748 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 EDDM3BP56851 147 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 TMEM249Q2WGJ8 235 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 UBE2NLQ5JXB2 153 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 MZT2AQ6P582 158 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 BTN2A1Q7KYR7 527 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 IZUMO1Q8IYV9 350 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 OR8H2Q8N162 312 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 MCFD2Q8NI22 146 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 ACOT12Q8WYK0 555 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 AP3S1Q92572 193 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 ARHGAP5-AS1Q96IT6 56 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 NEDD4LQ96PU5 975 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 SULT4A1Q9BR01 284 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 MRI1Q9BV20 369 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 SLIRPQ9GZT3 109 aaKnown RBP11.37□□□□□ -0.59
CD44-224ENST00000526669 C6orf62Q9GZU0 229 aaPredicted RBP11.37□□□□□ -0.59
CD44-224ENST00000526669 SEBOXQ9HB31 216 aaPredicted RBP11.37□□□□□ -0.59
CD44-224ENST00000526669 BATF3Q9NR55 127 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 RCC2Q9P258 522 aaKnown RBP11.37□□□□□ -0.59
CD44-224ENST00000526669 HIVEP1P15822 2718 aa11.37□□□□□ -0.59
CD44-224ENST00000526669 ANK3Q12955 4377 aaKnown RBP11.36□□□□□ -0.59
CD44-224ENST00000526669 SONP18583 2426 aaKnown RBP11.36□□□□□ -0.59
CD44-224ENST00000526669 METTL21EPA6NDL7 271 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 FOXI3A8MTJ6 420 aaPredicted RBP11.36□□□□□ -0.59
CD44-224ENST00000526669 FAM25AB3EWG3 89 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 FAM25CB3EWG5 89 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 FAM25GB3EWG6 89 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 C22orf46C9J442 243 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 CTDSP2O14595 271 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 RGS5O15539 181 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 FUT3P21217 361 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 TMEM50BP56557 158 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 SCAND1P57086 179 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 AESQ08117 197 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 OLFML2AQ68BL7 652 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 Q6ZTK2 550 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 GDPD3Q7L5L3 318 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 FAM185AQ8N0U4 392 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 FAM89BQ8N5H3 189 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 OR56B1Q8NGI3 324 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 OR10R2Q8NGX6 335 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 PPP1R35Q8TAP8 253 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 PTX4Q96A99 478 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 COQ2Q96H96 371 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 COX4I2Q96KJ9 171 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 DCTN5Q9BTE1 182 aa11.36□□□□□ -0.59
CD44-224ENST00000526669 PECRQ9BY49 303 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms