RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 LINC00312Q9Y6C7 94 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 CSPG4Q6UVK1 2322 aa4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 CHD3Q12873 2000 aaKnown RBP4.45□□□□□ -1.7
HMGB1P40-201ENST00000525121 ABCA1O95477 2261 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 TEP1Q99973 2627 aaKnown RBP4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 MTORP42345 2549 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 A0A087WXM4 84 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 MEIKINA0A087WXM9 373 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 A0A0G2JK05 382 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 CENPVL3A0A0U1RRI6 287 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 TMEM82A0PJX8 343 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 TMEM30CPA0ZSE6 113 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 ODAMA1E959 279 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 MAGEA13PA6NCF6 341 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM90A10PA6NDY2 464 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM90A18PA6NE21 464 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM90A16PA6NEW6 464 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM90A20PA6NIJ5 464 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM90A8PA6NJQ4 464 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM90A7PA6NKC0 464 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM90A22PA8MWA6 464 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM90A12PA8MX19 464 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM90A5PA8MXJ8 464 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM90A23PA8MXZ1 464 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 MCRIP1C9JLW8 97 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 SLC33A1O00400 549 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 NPFFO15130 113 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 PIN1P1O15428 100 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 PSPNO60542 156 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 SC5DO75845 299 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 CLPXO76031 633 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 BPNT1O95861 308 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FBP1P09467 338 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM90A15PP0C7V4 464 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM90A13PP0C7W8 464 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM90A14PP0C7W9 464 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM90A24PP0C7X0 464 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 MMP9P14780 707 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 MGMTP16455 207 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 PRTN3P24158 256 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 COX7A1P24310 79 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 LMO1P25800 156 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 HTR2CP28335 458 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 GLP1RP43220 463 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 UBE2E1P51965 193 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 ARHGDIBP52566 201 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 HILS1P60008 231 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 ACTG1P63261 375 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FABP5Q01469 135 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 AESQ08117 197 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 BAMBIQ13145 260 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 INSL4Q14641 139 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 NEDD8Q15843 81 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM189A2Q15884 450 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 RAB11BQ15907 218 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 MIDNQ504T8 468 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 KLF17Q5JT82 389 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FAM27D1Q5T7N8 215 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR52W1Q6IF63 320 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 UNQ9370/PRO34162Q6UXP9 181 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 ASCL4Q6XD76 172 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 C17orf107Q6ZR85 190 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 C9orf139Q6ZV77 190 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 PDZD9Q8IXQ8 264 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 SIGLECL1Q8N7X8 197 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZNF565Q8N9K5 539 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 TSPAN14Q8NG11 270 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR4S1Q8NGB4 309 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 OR4D6Q8NGJ1 314 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 KCNG3Q8TAE7 436 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZFAND2BQ8WV99 257 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 SLC25A28Q96A46 364 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 NEDD4LQ96PU5 975 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 NKX3-1Q99801 234 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 URM1Q9BTM9 101 aaKnown RBP4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 DPCDQ9BVM2 203 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 TMEM59Q9BXS4 323 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 SELENOIQ9C0D9 397 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 DPAGT1Q9H3H5 408 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 UNKLQ9H9P5 680 aaKnown RBP4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 ING3Q9NXR8 418 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 STUB1Q9UNE7 303 aa4.44□□□□□ -1.7
HMGB1P40-201ENST00000525121 FN1P02751 2386 aaKnown RBP4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 TRAV1-2A0A0B4J238 106 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 TRDV1A0A1B0GX56 115 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 A0A1W2PRD5 423 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 A0A1W2PRF3 423 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 A0A1W2PRM7 423 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 MEIOCA2RUB1 952 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 DNAJC9-AS1A6NH13 148 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 ZNF729A6NN14 1252 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 C17orf98A8MV24 154 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 SLC17A2O00624 439 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 GEMIN2O14893 280 aaKnown RBP4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 SLC22A1O15245 554 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 FCN3O75636 299 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 MPIG6BO95866 241 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 CRYBA1P05813 215 aa4.43□□□□□ -1.7
HMGB1P40-201ENST00000525121 IGHV1-8P0DP01 117 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms