RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 IHHQ14623 411 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 MRPL23Q16540 153 aaKnown RBP6.55□□□□□ -1.36
HDAC3-216ENST00000523088 ODF4Q2M2E3 257 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 FAM162BQ5T6X4 162 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 ZFAND6Q6FIF0 208 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 GRHL2Q6ISB3 625 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 SIGLEC15Q6ZMC9 328 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 RFLNAQ6ZTI6 216 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 IL17RELQ6ZVW7 336 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 HIST3H2AQ7L7L0 130 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 NEGR1Q7Z3B1 354 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 TSEN54Q7Z6J9 526 aaKnown RBP6.55□□□□□ -1.36
HDAC3-216ENST00000523088 APRG1Q8IVJ8 170 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 ZNF567Q8N184 647 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 BMPERQ8N8U9 685 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 GPR26Q8NDV2 337 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 PLPP5Q8NEB5 264 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 OR5AU1Q8NGC0 362 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 OR1J1Q8NGS3 322 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 OR2AE1Q8NHA4 323 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 PATE1Q8WXA2 126 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 HIST1H2ACQ93077 130 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 TMEM18Q96B42 140 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 KCTD7Q96MP8 289 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 OR2A7Q96R45 310 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 GINS3Q9BRX5 216 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 DOHHQ9BU89 302 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 OR11A1Q9GZK7 315 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 OR51I1Q9H343 314 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 SLC23A2Q9UGH3 650 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 WIPI2Q9Y4P8 454 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 HEBP2Q9Y5Z4 205 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 TRBV4-1A0A0J9YWV2 114 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 A0A1B0GUS0 222 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 MAP1LC3B2A6NCE7 125 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 ZNF785A8K8V0 405 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 ZNF705GA8MUZ8 300 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-216ENST00000523088 TEX22C9J3V5 150 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 M0R082 166 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 PRICKLE3O43900 615 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-216ENST00000523088 EIF4E2O60573 245 aaKnown RBP6.54□□□□□ -1.36
HDAC3-216ENST00000523088 HIST1H2BKO60814 126 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 TOXO94900 526 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 SEMG1P04279 462 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 HIST1H2BJP06899 126 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 CT45A8P0DMV1 189 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 CT45A9P0DMV2 189 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 CCL4P13236 92 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 ZNF17P17021 662 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 HIST1H2BOP23527 126 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 AGTR1P30556 359 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 HIST1H2BBP33778 126 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 DAP3P51398 398 aaKnown RBP6.54□□□□□ -1.36
HDAC3-216ENST00000523088 POLR2HP52434 150 aaKnown RBP6.54□□□□□ -1.36
HDAC3-216ENST00000523088 GFRA1P56159 465 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 DLX6P56179 175 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 HIST1H2BDP58876 126 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 HIST1H2BCP62807 126 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 RPS28P62857 69 aaKnown RBP6.54□□□□□ -1.36
HDAC3-216ENST00000523088 SRPXP78539 464 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 BTG2P78543 158 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 H3F3AP84243 136 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 HSD52Q0P140 79 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 CTBP1Q13363 440 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 OR2F1Q13607 317 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 LY6DQ14210 128 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 P2RY6Q15077 328 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 HIST2H2BEQ16778 126 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 CT45A2Q5DJT8 189 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-216ENST00000523088 CPTPQ5TA50 214 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 FCRL6Q6DN72 434 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 APOOLQ6UXV4 268 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 GLDNQ6ZMI3 551 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-216ENST00000523088 GTF2H5Q6ZYL4 71 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 SLC25A26Q70HW3 274 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 FAM219AQ8IW50 185 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 SFTPA2Q8IWL1 248 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 BEST3Q8N1M1 668 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 PRELID2Q8N945 189 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 OR4N2Q8NGD1 307 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 ZNF417Q8TAU3 575 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 HIST1H2BHQ93079 126 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 PTX4Q96A99 478 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 FLYWCH2Q96CP2 140 aaKnown RBP6.54□□□□□ -1.36
HDAC3-216ENST00000523088 RTP4Q96DX8 246 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 HIST1H2BNQ99877 126 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 HIST1H2BMQ99879 126 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 TAPBPLQ9BX59 468 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 MAP1LC3BQ9GZQ8 125 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 RNF167Q9H6Y7 350 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 A4GALTQ9NPC4 353 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 HEYLQ9NQ87 328 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-216ENST00000523088 PILRAQ9UKJ1 303 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 SLC45A2Q9UMX9 530 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 SIGLEC7Q9Y286 467 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 ORC6Q9Y5N6 252 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 RFNGQ9Y644 331 aa6.54□□□□□ -1.36
HDAC3-216ENST00000523088 ZNF462Q96JM2 2506 aa6.53□□□□□ -1.36
HDAC3-216ENST00000523088 TLN1Q9Y490 2541 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms