RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 STAG3L2P0CL84 134 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 GGT1P19440 569 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 CCNG1P51959 295 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 TGFBR3Q03167 851 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF763Q0D2J5 394 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 TRAM2Q15035 370 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 GUSBP1Q15486 140 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR52W1Q6IF63 320 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 C1orf94Q6P1W5 598 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 SSX8Q7RTT4 187 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 FAM220AQ7Z4H9 259 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 SBSPONQ8IVN8 264 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 PRR22Q8IZ63 422 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 C6orf223Q8N319 242 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 RIBC1Q8N443 379 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 MORN4Q8NDC4 146 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR9G1Q8NH87 305 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF502Q8TBZ5 544 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 CAPSLQ8WWF8 208 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 RAB8BQ92930 207 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 CERS2Q96G23 380 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 MAGEB18Q96M61 343 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 HBEGFQ99075 208 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 EBNA1BP2Q99848 306 aaKnown RBP3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 RARRES2Q99969 163 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 NRIP2Q9BQI9 281 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 SIKE1Q9BRV8 207 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 ACTR3CQ9C0K3 210 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 GFRA4Q9GZZ7 299 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR51J1Q9H342 316 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 AHSPQ9NZD4 102 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 PTTG3PQ9NZH4 202 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 MYEF2Q9P2K5 600 aaKnown RBP3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZMAT5Q9UDW3 170 aaKnown RBP3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 A0A1W2PPV4 95 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CIB4A0PJX0 185 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF879B4DU55 563 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 hCG_2039718K7EN88 272 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 AIREO43918 545 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 SS18L1O75177 396 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CBR3O75828 277 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CSTAP01040 98 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 SERPINA5P05154 406 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 SERPINE2P07093 398 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 ADRA2AP08913 450 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 INAFM2P0DMQ5 153 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CT45A6P0DMU7 189 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CT45A5P0DMU8 189 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CT45A7P0DMV0 189 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 SERPINB5P36952 375 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 RPS15AP62244 130 aaKnown RBP3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 PPIDQ08752 370 aaKnown RBP3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 STX4Q12846 297 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 PDIA2Q13087 525 aaKnown RBP3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF658BQ4V348 819 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CT45A1Q5HYN5 189 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 TIMM23BQ5SRD1 257 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CNIH2Q6PI25 160 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 BRD3OSQ6XYD6 125 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CMTM1Q8IZ96 169 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 TMEM86BQ8N661 226 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 TRIML2Q8N7C3 387 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 GATSQ8NAP1 163 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CT45A3Q8NHU0 189 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 RAD51AP1Q96B01 352 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 TRIB3Q96RU7 358 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 TSG101Q99816 390 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 SNRNP25Q9BV90 132 aaKnown RBP3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 PIGUQ9H490 435 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 TRABDQ9H4I3 376 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 C16orf95Q9H693 158 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 RNF167Q9H6Y7 350 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 PRTFDC1Q9NRG1 225 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 XCL2Q9UBD3 114 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 MCTS1Q9ULC4 181 aaKnown RBP3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 MMACHCQ9Y4U1 282 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CDH10Q9Y6N8 788 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 IGKV1-8A0A0C4DH67 115 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 GOLGA8QA0A0J9YX86 632 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 ISPDA4D126 451 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 GOLGA8RI6L899 631 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 M0QX08 132 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 XKRYO14609 159 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 XRCC2O43543 280 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 FCN3O75636 299 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 HSPB1P04792 205 aaKnown RBP3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 P0C879 139 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 AGTR1P30556 359 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 AQP2P41181 271 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 STX17P56962 302 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 ACVR1Q04771 509 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 SLAMF1Q13291 335 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 BCL2A1Q16548 175 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 NIPAL1Q6NVV3 410 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 VN1R4Q7Z5H5 301 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 P2RY8Q86VZ1 359 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 KRTAP7-1Q8IUC3 87 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 FAM58AQ8N1B3 248 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF485Q8NCK3 441 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 TMEM104Q8NE00 496 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms