RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 MRPL48Q96GC5 212 aaKnown RBP1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 SNF8Q96H20 258 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 KCNS1Q96KK3 526 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 TAPBPLQ9BX59 468 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 PLA2G2FQ9BZM2 168 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 MS4A6AQ9H2W1 248 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR51B6Q9H340 312 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 POMKQ9H5K3 350 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 METTL17Q9H7H0 456 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 VSIRQ9H7M9 311 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 DMAC2Q9NW81 257 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 FKBP14Q9NWM8 211 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 PRO0628Q9UI54 55 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 KLK12Q9UKR0 248 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 PSG8Q9UQ74 426 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 FARSAQ9Y285 508 aaKnown RBP1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 ARL2BPQ9Y2Y0 163 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 LSM5Q9Y4Y9 91 aaKnown RBP1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 ARL5AQ9Y689 179 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 NRCAMQ92823 1304 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 CAMTA1Q9Y6Y1 1673 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 NACAE9PAV3 2078 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 IGLV11-55A0A075B6I3 123 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 A0A096LNJ9 63 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 IGHV6-1A0A0B4J1U7 121 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 A0A1W2PP64 1363 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 PLAC8L1A1L4L8 177 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR5K4A6NMS3 321 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZNF705GA8MUZ8 300 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 PGRMC1O00264 195 aaKnown RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 MANBAO00462 879 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 KPNA3O00505 521 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 WDR62O43379 1518 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLC37A4O43826 429 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 PDCD6O75340 191 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 GABARAPO95166 117 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLC25A14O95258 325 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 SERPINA1P01009 418 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 TNNC2P02585 160 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 CECR9P0C854 216 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 TAC1P20366 129 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 OMGP23515 440 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 CFL1P23528 166 aaKnown RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 DTYMKP23919 212 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 RPL12P30050 165 aaKnown RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 AGTR1P30556 359 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 PYCR1P32322 319 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 SSTR5P35346 364 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 ACOT2P49753 483 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 SULT1A1P50225 295 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 SULT1A2P50226 295 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZNF136P52737 540 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 CCL23P55773 120 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 TCL1AP56279 114 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 RPL23P62829 140 aaKnown RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 GTF2BQ00403 316 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 SMAGPQ0VAQ4 97 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 ERCC8Q13216 396 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 FBXL19-AS1Q494R0 122 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 Q499Y3 187 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 SAXO2Q658L1 398 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 XKRXQ6PP77 449 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 FAM131AQ6UXB0 335 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 LYPD2Q6UXB3 125 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 Q6ZSR6 202 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 LINC01551Q86U37 167 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 AKAP14Q86UN6 197 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 COMMD7Q86VX2 200 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZCCHC24Q8N2G6 241 aaKnown RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 HAVCR2Q8TDQ0 301 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 DCAKDQ8WVC6 231 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 ASB13Q8WXK3 278 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 TMA16Q96EY4 203 aaKnown RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 CEP19Q96LK0 163 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 HSD17B10Q99714 261 aaKnown RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 PRRT1Q99946 306 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 TMEM243Q9BU79 118 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 EBPLQ9BY08 206 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 MRPL20Q9BYC9 149 aaKnown RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 LCE3DQ9BYE3 92 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 ULBP1Q9BZM6 244 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLC25A31Q9H0C2 315 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR51E2Q9H255 320 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 IFI27L2Q9H2X8 130 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 RBFOX1Q9NWB1 397 aaKnown RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 PAQR5Q9NXK6 330 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 VPS29Q9UBQ0 182 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 FBXO5Q9UKT4 447 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZNF608Q9ULD9 1512 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 RAB26Q9ULW5 256 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 MTCL1Q9Y4B5 1905 aaKnown RBP1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 ENPP4Q9Y6X5 453 aa1.53□□□□□ -2.16
HMGB1P35-201ENST00000503360 MN1Q10571 1320 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P35-201ENST00000503360 ZNF532Q9HCE3 1301 aa1.52□□□□□ -2.17
HMGB1P35-201ENST00000503360 IGLV4-69A0A075B6H9 119 aa1.52□□□□□ -2.17
HMGB1P35-201ENST00000503360 IGKV1-8A0A0C4DH67 115 aa1.52□□□□□ -2.17
HMGB1P35-201ENST00000503360 A0A0U1RQV1 116 aa1.52□□□□□ -2.17
HMGB1P35-201ENST00000503360 TEX50A0A1B0GTY4 177 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms