RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 OR10K1Q8NGX5 313 aa10.46□□□□□ -0.73
HDAC1-209ENST00000484305 LINC01006Q8NI28 216 aa10.46□□□□□ -0.73
HDAC1-209ENST00000484305 TNFAIP8L1Q8WVP5 186 aa10.46□□□□□ -0.73
HDAC1-209ENST00000484305 WFDC12Q8WWY7 111 aa10.46□□□□□ -0.73
HDAC1-209ENST00000484305 CPNE2Q96FN4 548 aaPredicted RBP10.46□□□□□ -0.73
HDAC1-209ENST00000484305 PGLYRP3Q96LB9 341 aa10.46□□□□□ -0.73
HDAC1-209ENST00000484305 NR1H4Q96RI1 486 aaPredicted RBP10.46□□□□□ -0.73
HDAC1-209ENST00000484305 FKBP14Q9NWM8 211 aa10.46□□□□□ -0.73
HDAC1-209ENST00000484305 PNMA8CA0A1B0GUJ8 204 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 CDRT1O95170 752 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 ALDOBP05062 364 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 IGFBP3P17936 291 aaPredicted RBP10.45□□□□□ -0.74
HDAC1-209ENST00000484305 TGFBR2P37173 567 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 PTGFRP43088 359 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 OR3A4PP47883 348 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 KRTAP10-3P60369 221 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 PPP3R1P63098 170 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 RSU1Q15404 277 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 Q499Y3 187 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 DDI2Q5TDH0 399 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 ZNF626Q68DY1 528 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 ASCL4Q6XD76 172 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 CHST4Q8NCG5 386 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 OR11H6Q8NGC7 330 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 PIFOQ8TCI5 191 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 COQ2Q96H96 371 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 FAM192AQ9GZU8 254 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 TMEM138Q9NPI0 162 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 ING3Q9NXR8 418 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 UBE2J1Q9Y385 318 aaPredicted RBP10.45□□□□□ -0.74
HDAC1-209ENST00000484305 RNF114Q9Y508 228 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 SESN1Q9Y6P5 492 aa10.45□□□□□ -0.74
HDAC1-209ENST00000484305 TRAV8-7A0A075B6U6 113 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 TRGV10A0A0A0MS01 117 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 IGHV2-26A0A0B4J1V2 119 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 A0A1W2PPK0 400 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 FUOMA2VDF0 154 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 MAGEA13PA6NCF6 341 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 H0YJX3 145 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 CLPXO76031 633 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 CSN2P05814 226 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 BDKRB2P30411 391 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 ZNF93P35789 620 aaPredicted RBP10.44□□□□□ -0.74
HDAC1-209ENST00000484305 RAB13P51153 203 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 AQP4P55087 323 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 WNT4P56705 351 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 GABPB1Q06547 395 aaPredicted RBP10.44□□□□□ -0.74
HDAC1-209ENST00000484305 DYNC1I2Q13409 638 aaKnown RBP10.44□□□□□ -0.74
HDAC1-209ENST00000484305 RIPK1Q13546 671 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 ATXN7L3Q14CW9 347 aaPredicted RBP10.44□□□□□ -0.74
HDAC1-209ENST00000484305 SSX2Q16385 188 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 AANATQ16613 207 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 PIGYQ3MUY2 71 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 PLA1AQ53H76 456 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 YIF1BQ5BJH7 314 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 KRBOX4Q5JUW0 171 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 BAIAP2L2Q6UXY1 529 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 NANOGP1Q8N7R0 232 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 Q8NFD4 153 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 OR51T1Q8NGJ9 327 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 CORO2AQ92828 525 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 OR14A2Q96R54 314 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 C16orf95Q9H693 158 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 ING4Q9UNL4 249 aa10.44□□□□□ -0.74
HDAC1-209ENST00000484305 TBL2Q9Y4P3 447 aaKnown RBP10.44□□□□□ -0.74
HDAC1-209ENST00000484305 PKD1L1Q8TDX9 2849 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 TRRAPQ9Y4A5 3859 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 TRBV5-7A0A0A0MS05 114 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 TRAV24A0A0B4J272 114 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 ODAMA1E959 279 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 MEGF11A6BM72 1044 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 ERICH4A6NGS2 130 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 HSPB6O14558 160 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 MYL12BO14950 172 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 GPX5O75715 221 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 TSPAN9O75954 239 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 HTR3BO95264 441 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 CELP19835 753 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 GDNFP39905 211 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 PROK1P58294 105 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 TAS2R43P59537 309 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 PAN3Q58A45 887 aaKnown RBP10.43□□□□□ -0.74
HDAC1-209ENST00000484305 PRR31Q5SQ13 230 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 C6orf141Q5SZD1 244 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 PRAMEF5Q5TYX0 476 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 SLC35E4Q6ICL7 350 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 MALSU1Q96EH3 234 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 ZNF184Q99676 751 aaPredicted RBP10.43□□□□□ -0.74
HDAC1-209ENST00000484305 PPIL3Q9H2H8 161 aaKnown RBP10.43□□□□□ -0.74
HDAC1-209ENST00000484305 TMEM133Q9H2Q1 129 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 GAL3ST2Q9H3Q3 398 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 ZNF696Q9H7X3 374 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 ZNF581Q9P0T4 197 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 MGAM2Q2M2H8 2515 aa10.43□□□□□ -0.74
HDAC1-209ENST00000484305 FAM172BPA6NC97 362 aa10.42□□□□□ -0.74
HDAC1-209ENST00000484305 VGLL3A8MV65 326 aa10.42□□□□□ -0.74
HDAC1-209ENST00000484305 PTGES3LE9PB15 166 aa10.42□□□□□ -0.74
HDAC1-209ENST00000484305 CHST1O43916 411 aa10.42□□□□□ -0.74
HDAC1-209ENST00000484305 CDK1P06493 297 aa10.42□□□□□ -0.74
HDAC1-209ENST00000484305 JUNBP17275 347 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms