RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PIAS2O75928 621 aa11.05□□□□□ -0.64
VPS52-218ENST00000482399 CFPP27918 469 aa11.05□□□□□ -0.64
VPS52-218ENST00000482399 LBX1P52954 281 aa11.05□□□□□ -0.64
VPS52-218ENST00000482399 C10orf91Q5T1B1 145 aa11.05□□□□□ -0.64
VPS52-218ENST00000482399 SLC25A47Q6Q0C1 308 aa11.05□□□□□ -0.64
VPS52-218ENST00000482399 IL22RA1Q8N6P7 574 aa11.05□□□□□ -0.64
VPS52-218ENST00000482399 SPACA9Q96E40 222 aaPredicted RBP11.05□□□□□ -0.64
VPS52-218ENST00000482399 RSG1Q9BU20 258 aa11.05□□□□□ -0.64
VPS52-218ENST00000482399 PPYP01298 95 aa11.05□□□□□ -0.64
VPS52-218ENST00000482399 METTL15P1P0C7V9 234 aa11.05□□□□□ -0.64
VPS52-218ENST00000482399 AGAP20933 346 aa11.05□□□□□ -0.64
VPS52-218ENST00000482399 TMEM187Q14656 261 aa11.05□□□□□ -0.64
VPS52-218ENST00000482399 SURF2Q15527 256 aaPredicted RBP11.05□□□□□ -0.64
VPS52-218ENST00000482399 PYY3Q5JQD4 70 aa11.05□□□□□ -0.64
VPS52-218ENST00000482399 COL13A1Q5TAT6 717 aaPredicted RBP11.05□□□□□ -0.64
VPS52-218ENST00000482399 WDR25Q64LD2 544 aaPredicted RBP11.05□□□□□ -0.64
VPS52-218ENST00000482399 GAPTQ8N292 157 aa11.05□□□□□ -0.64
VPS52-218ENST00000482399 TVP23CQ96ET8 276 aa11.05□□□□□ -0.64
VPS52-218ENST00000482399 CXCL13O43927 109 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 CD63P08962 238 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 CXCL1P09341 107 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 MPZP25189 248 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 ECI1P42126 302 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 NPBWR2P48146 333 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 RAB1AP62820 205 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 TLE4Q04727 773 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 GAMTQ14353 236 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 SPANXN5Q5MJ07 72 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 RTL6Q6ICC9 239 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 DTX1Q86Y01 620 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 LYPD6Q86Y78 171 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 OR1K1Q8NGR3 316 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 Q8WTZ3 238 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 CA5BP1Q8WTZ4 195 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 EXTL1Q92935 676 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 FAM210BQ96KR6 192 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 SSX3Q99909 188 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 CCL28Q9NRJ3 127 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 C19orf25Q9UFG5 118 aaPredicted RBP11.04□□□□□ -0.64
VPS52-218ENST00000482399 STARD10Q9Y365 291 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 IGSF23A1L1A6 192 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 MPPED1O15442 326 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 SOX15O60248 233 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 CFIP05156 583 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 TMEM252Q8N6L7 170 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 ZNF611Q8N823 705 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 ZNF501Q96CX3 271 aaPredicted RBP11.04□□□□□ -0.64
VPS52-218ENST00000482399 PPP1R3CQ9UQK1 317 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 FER1L5A0AVI2 2057 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 CYTIPO60759 359 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 WDR1O75083 606 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 CEACAM16Q2WEN9 425 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 HLA-BQ31612 363 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 RBMXL1Q96E39 390 aaKnown RBP11.04□□□□□ -0.64
VPS52-218ENST00000482399 WFIKKN1Q96NZ8 548 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 ZNF665Q9H7R5 613 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 PLEKHF2Q9H8W4 249 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 CALHM2Q9HA72 323 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 AURKAIP1Q9NWT8 199 aaPredicted RBP11.04□□□□□ -0.64
VPS52-218ENST00000482399 MTCH2Q9Y6C9 303 aa11.04□□□□□ -0.64
VPS52-218ENST00000482399 SHISA7A6NL88 538 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 SCTP09683 121 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 PRF1P14222 555 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 MSX1P28360 303 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 OTX2P32243 289 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 CD200P41217 278 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 GPM6AP51674 278 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 ZNF787Q6DD87 383 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 GUSBP11Q6P575 273 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 OR2M3Q8NG83 312 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 EDARADDQ8WWZ3 215 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 TMEM37Q8WXS4 190 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 FRZBQ92765 325 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 Q96M66 194 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 TINAGQ9UJW2 476 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 THADAQ6YHU6 1953 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 SPTBN2O15020 2390 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 C2orf16Q68DN1 1984 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 A0A1W2PPQ1 181 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 PGA5P0DJD9 388 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 CCL3P10147 92 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 ZXDAP98168 799 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 IL13RA2Q14627 380 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 TCEAL6Q6IPX3 200 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 C1orf87Q8N0U7 546 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 D2HGDHQ8N465 521 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 COMMD1Q8N668 190 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 THOC3Q96J01 351 aaKnown RBP11.03□□□□□ -0.64
VPS52-218ENST00000482399 LAMP3Q9UQV4 416 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 TMED3Q9Y3Q3 217 aa11.03□□□□□ -0.64
VPS52-218ENST00000482399 BCAT2O15382 392 aaPredicted RBP11.02□□□□□ -0.64
VPS52-218ENST00000482399 GLB1P16278 677 aa11.02□□□□□ -0.64
VPS52-218ENST00000482399 FIP1L1Q6UN15 594 aaKnown RBP11.02□□□□□ -0.64
VPS52-218ENST00000482399 FAM131CQ96AQ9 280 aa11.02□□□□□ -0.64
VPS52-218ENST00000482399 NTNG2Q96CW9 530 aa11.02□□□□□ -0.64
VPS52-218ENST00000482399 ZNF488Q96MN9 340 aa11.02□□□□□ -0.64
VPS52-218ENST00000482399 A0A087X0M5 115 aa11.02□□□□□ -0.65
VPS52-218ENST00000482399 A0A1B0GX30 115 aa11.02□□□□□ -0.65
VPS52-218ENST00000482399 CD300LBA8K4G0 201 aa11.02□□□□□ -0.65
VPS52-218ENST00000482399 FOSL2P15408 326 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms