RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 LHX5Q9H2C1 402 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 OR51V1Q9H2C8 321 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 INIPQ9NRY2 104 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 C1orf109Q9NX04 203 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 SLC22A7Q9Y694 548 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 ANKRD12Q6UB98 2062 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 TTC21AQ8NDW8 1320 aa2.38□□□□□ -2.03
SMNDC1-205ENST00000477763 SIGLEC1Q9BZZ2 1709 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 IGKV2-24A0A0C4DH68 120 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 C9JQL5 133 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 GOLGA8KD6RF30 607 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 GOLGA8MH3BSY2 632 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 hCG_2039718K7EN88 272 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 ZNF593O00488 134 aaPredicted RBP2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 TNFAIP8O95379 198 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 SNRPAP09012 282 aaKnown RBP2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 CTXN2P0C2S0 81 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 OCM2P0CE71 109 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 PET100P0DJ07 73 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 UBE2KP61086 200 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 IL5RAQ01344 420 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 TPBGQ13641 420 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 CASP8Q14790 479 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 NDUFAF6Q330K2 333 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 SLC36A2Q495M3 483 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 RBM48Q5RL73 367 aaKnown RBP2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 TMEM69Q5SWH9 247 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 IDNKQ5T6J7 187 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 TTC33Q6PID6 262 aaPredicted RBP2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 TMEM136Q6ZRR5 245 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 FAM231DQ6ZW35 169 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 FUNDC1Q8IVP5 155 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 LINC00304Q8N9R0 145 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 CCDC112Q8NEF3 446 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 OR5AK3PQ8NH89 298 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 ERMNQ8TAM6 284 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 FAM57AQ8TBR7 257 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 RNF133Q8WVZ7 376 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 RILPQ96NA2 401 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 CIB1Q99828 191 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 COPS4Q9BT78 406 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 PLEKHA1Q9HB21 404 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 ABCB9Q9NP78 766 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 RBM22Q9NW64 420 aaKnown RBP eCLIP2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 CYB5R1Q9UHQ9 305 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 GPR179Q6PRD1 2367 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 EVC2Q86UK5 1308 aa2.37□□□□□ -2.03
SMNDC1-205ENST00000477763 LRRN3E7EW58 273 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 M0R1B8 84 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 ADAP1O75689 374 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 IGKV4-1P06312 121 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 RPSAP08865 295 aaKnown RBP2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 LIPCP11150 499 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 OR12D2P58182 307 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 ACTBP60709 375 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 ACTG1P63261 375 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 MRPS25P82663 173 aaKnown RBP2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 REEP5Q00765 189 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 MEF2CQ06413 473 aaPredicted RBP2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 FAM53BQ14153 422 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 IMPG1Q17R60 797 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 ATP6AP1LQ52LC2 224 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 TTMPQ5BVD1 217 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 ACTL10Q5JWF8 245 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 TIMM23BQ5SRD1 257 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 CLVS2Q5SYC1 327 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 SDHAF4Q5VUM1 108 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 KCTD16Q68DU8 428 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 UGT2A3Q6UWM9 527 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 CLEC19AQ6UXS0 136 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 AHSA2Q719I0 299 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 CYP4Z2PQ8N1L4 340 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 TMEM156Q8N614 296 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 OR4K2Q8NGD2 314 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 YIPF5Q969M3 257 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 SELENOSQ9BQE4 189 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 SHANK2-AS3Q9BTD1 123 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 C12orf4Q9NQ89 552 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 PARP11Q9NR21 331 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 PLEKHJ1Q9NW61 149 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 FKBP14Q9NWM8 211 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 ACOT9Q9Y305 439 aa2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 SAMHD1Q9Y3Z3 626 aaKnown RBP2.36□□□□□ -2.03
SMNDC1-205ENST00000477763 BRCA1P38398 1863 aaKnown RBP2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 RPRD2Q5VT52 1461 aaKnown RBP2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 TVP23AA6NH52 213 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 ZNF233A6NK53 670 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 K7EN84 100 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 SULT1C2O00338 296 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 SLC16A4O15374 487 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 SLC31A1O15431 190 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 CYTH3O43739 400 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 PSIP1O75475 530 aaKnown RBP2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 PSMG1O95456 288 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 HLA-DRAP01903 254 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 ORM1P02763 201 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 IFNA6P05013 189 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 CDK1P06493 297 aa2.35□□□□□ -2.03
SMNDC1-205ENST00000477763 OR5AC1P0C628 307 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms